RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RAPGEF2Q9Y4G8 1499 aa39.07■■■■□ 3.85
NEK9-203ENST00000553945 ERCC6L2Q5T890 1561 aa39.04■■■■□ 3.84
NEK9-203ENST00000553945 JPH4Q96JJ6 628 aa39.03■■■■□ 3.84
NEK9-203ENST00000553945 KIAA0586Q9BVV6 1533 aa39.03■■■■□ 3.84
NEK9-203ENST00000553945 PRG4Q92954 1404 aaPredicted RBP38.96■■■■□ 3.83
NEK9-203ENST00000553945 EEA1Q15075 1411 aa38.92■■■■□ 3.82
NEK9-203ENST00000553945 PRXQ9BXM0 1461 aa38.92■■■■□ 3.82
NEK9-203ENST00000553945 CSRNP3Q8WYN3 585 aa38.91■■■■□ 3.82
NEK9-203ENST00000553945 FAM9AQ8IZU1 332 aaPredicted RBP38.86■■■■□ 3.81
NEK9-203ENST00000553945 IQGAP2Q13576 1575 aa38.84■■■■□ 3.81
NEK9-203ENST00000553945 CTTNBP2Q8WZ74 1663 aa38.74■■■■□ 3.79
NEK9-203ENST00000553945 CARMIL2Q6F5E8 1435 aa38.64■■■■□ 3.78
NEK9-203ENST00000553945 UGGT2Q9NYU1 1516 aa38.61■■■■□ 3.77
NEK9-203ENST00000553945 DISP1Q96F81 1524 aa38.55■■■■□ 3.76
NEK9-203ENST00000553945 KIF21BO75037 1637 aa38.55■■■■□ 3.76
NEK9-203ENST00000553945 TTBK1Q5TCY1 1321 aaPredicted RBP38.52■■■■□ 3.76
NEK9-203ENST00000553945 TNIKQ9UKE5 1360 aa38.51■■■■□ 3.76
NEK9-203ENST00000553945 PTPRGP23470 1445 aa38.49■■■■□ 3.75
NEK9-203ENST00000553945 KIAA0556O60303 1618 aa38.46■■■■□ 3.75
NEK9-203ENST00000553945 GOLGA3Q08378 1498 aa38.41■■■■□ 3.74
NEK9-203ENST00000553945 EHMT2Q96KQ7 1210 aa38.39■■■■□ 3.74
NEK9-203ENST00000553945 ADCY10Q96PN6 1610 aa38.38■■■■□ 3.73
NEK9-203ENST00000553945 TRHP20396 242 aaPredicted RBP38.37■■■■□ 3.73
NEK9-203ENST00000553945 NPM1P06748 294 aaKnown RBP eCLIP38.29■■■■□ 3.72
NEK9-203ENST00000553945 UBTFP17480 764 aaKnown RBP38.27■■■■□ 3.72
NEK9-203ENST00000553945 RANGAP1P46060 587 aaPredicted RBP38.25■■■■□ 3.71
NEK9-203ENST00000553945 UACAQ9BZF9 1416 aa38.22■■■■□ 3.71
NEK9-203ENST00000553945 P3H3Q8IVL6 736 aa38.22■■■■□ 3.71
NEK9-203ENST00000553945 SAMD9Q5K651 1589 aa38.21■■■■□ 3.71
NEK9-203ENST00000553945 UHRF1BP1LA0JNW5 1464 aa38.17■■■■□ 3.7
NEK9-203ENST00000553945 ABCC2Q92887 1545 aa38.16■■■■□ 3.7
NEK9-203ENST00000553945 MAPKBP1O60336 1514 aa38.1■■■■□ 3.69
NEK9-203ENST00000553945 PLB1Q6P1J6 1458 aa38.09■■■■□ 3.69
NEK9-203ENST00000553945 EFCAB5A4FU69 1503 aa38.04■■■■□ 3.68
NEK9-203ENST00000553945 ABCA8O94911 1581 aa38.04■■■■□ 3.68
NEK9-203ENST00000553945 FHOD3Q2V2M9 1422 aa38.01■■■■□ 3.68
NEK9-203ENST00000553945 KDM5BQ9UGL1 1544 aa37.99■■■■□ 3.67
NEK9-203ENST00000553945 ZCCHC11Q5TAX3 1644 aaKnown RBP37.97■■■■□ 3.67
NEK9-203ENST00000553945 KIF13AQ9H1H9 1805 aa37.96■■■■□ 3.67
NEK9-203ENST00000553945 ABCC10Q5T3U5 1492 aa37.93■■■■□ 3.66
NEK9-203ENST00000553945 ASXL2Q76L83 1435 aa37.9■■■■□ 3.66
NEK9-203ENST00000553945 FAM69CQ0P6D2 419 aa37.89■■■■□ 3.66
NEK9-203ENST00000553945 DIP2BQ9P265 1576 aa37.89■■■■□ 3.66
NEK9-203ENST00000553945 RAPGEF6Q8TEU7 1601 aa37.87■■■■□ 3.65
NEK9-203ENST00000553945 ARHGAP35Q9NRY4 1499 aa37.85■■■■□ 3.65
NEK9-203ENST00000553945 ARID3CA6NKF2 412 aa37.8■■■■□ 3.64
NEK9-203ENST00000553945 ATP10BO94823 1461 aa37.73■■■■□ 3.63
NEK9-203ENST00000553945 NUP153P49790 1475 aaKnown RBP37.71■■■■□ 3.63
NEK9-203ENST00000553945 WDR7Q9Y4E6 1490 aa37.71■■■■□ 3.63
NEK9-203ENST00000553945 FMN1Q68DA7 1419 aa37.68■■■■□ 3.62
NEK9-203ENST00000553945 EPRSP07814 1512 aaKnown RBP37.67■■■■□ 3.62
NEK9-203ENST00000553945 GLI2P10070 1586 aa37.66■■■■□ 3.62
NEK9-203ENST00000553945 CLIP1P30622 1438 aa37.64■■■■□ 3.62
NEK9-203ENST00000553945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.64■■■■□ 3.62
NEK9-203ENST00000553945 HNRNPUL2Q1KMD3 747 aaKnown RBP37.64■■■■□ 3.62
NEK9-203ENST00000553945 TSPOAP1O95153 1857 aa37.63■■■■□ 3.61
NEK9-203ENST00000553945 LOC105371045A0A1W2PR82 267 aa37.59■■■■□ 3.61
NEK9-203ENST00000553945 KCNH8Q96L42 1107 aa37.59■■■■□ 3.61
NEK9-203ENST00000553945 ATP1B4Q9UN42 357 aaPredicted RBP37.57■■■■□ 3.6
NEK9-203ENST00000553945 HECW1Q76N89 1606 aa37.53■■■■□ 3.6
NEK9-203ENST00000553945 MAP3K4Q9Y6R4 1608 aa37.51■■■■□ 3.6
NEK9-203ENST00000553945 CDK13Q14004 1512 aaKnown RBP37.47■■■■□ 3.59
NEK9-203ENST00000553945 CEP162Q5TB80 1403 aa37.47■■■■□ 3.59
NEK9-203ENST00000553945 PPRC1Q5VV67 1664 aaKnown RBP37.45■■■■□ 3.59
NEK9-203ENST00000553945 PLEKHD1A6NEE1 506 aa37.42■■■■□ 3.58
NEK9-203ENST00000553945 PCF11O94913 1555 aaKnown RBP37.42■■■■□ 3.58
NEK9-203ENST00000553945 CFAP43Q8NDM7 1665 aa37.41■■■■□ 3.58
NEK9-203ENST00000553945 CASKIN1Q8WXD9 1431 aa37.39■■■■□ 3.58
NEK9-203ENST00000553945 CD109Q6YHK3 1445 aa37.37■■■■□ 3.57
NEK9-203ENST00000553945 LRRIQ1Q96JM4 1722 aa37.35■■■■□ 3.57
NEK9-203ENST00000553945 TEX14Q8IWB6 1497 aa37.33■■■■□ 3.57
NEK9-203ENST00000553945 ABCA9Q8IUA7 1624 aa37.32■■■■□ 3.57
NEK9-203ENST00000553945 KDM6BO15054 1643 aa37.31■■■■□ 3.56
NEK9-203ENST00000553945 FYCO1Q9BQS8 1478 aa37.31■■■■□ 3.56
NEK9-203ENST00000553945 MAGI3Q5TCQ9 1506 aa37.27■■■■□ 3.56
NEK9-203ENST00000553945 CDK11AQ9UQ88 783 aaPredicted RBP37.27■■■■□ 3.56
NEK9-203ENST00000553945 CCDC18Q5T9S5 1454 aa37.25■■■■□ 3.55
NEK9-203ENST00000553945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.16■■■■□ 3.54
NEK9-203ENST00000553945 TROQ12816 1431 aaPredicted RBP37.14■■■■□ 3.54
NEK9-203ENST00000553945 TTC37Q6PGP7 1564 aa37.13■■■■□ 3.53
NEK9-203ENST00000553945 COL17A1Q9UMD9 1497 aaPredicted RBP37.09■■■■□ 3.53
NEK9-203ENST00000553945 KIF14Q15058 1648 aa37.09■■■■□ 3.53
NEK9-203ENST00000553945 VPS8Q8N3P4 1428 aa37.01■■■■□ 3.51
NEK9-203ENST00000553945 NEO1Q92859 1461 aa37■■■■□ 3.51
NEK9-203ENST00000553945 PHLDB1Q86UU1 1377 aa36.98■■■■□ 3.51
NEK9-203ENST00000553945 MYO5CQ9NQX4 1742 aa36.96■■■■□ 3.51
NEK9-203ENST00000553945 ARAP3Q8WWN8 1544 aa36.95■■■■□ 3.51
NEK9-203ENST00000553945 FANCAO15360 1455 aa36.94■■■■□ 3.5
NEK9-203ENST00000553945 CFAP74Q9C0B2 1584 aa36.94■■■■□ 3.5
NEK9-203ENST00000553945 PLCH2O75038 1416 aa36.93■■■■□ 3.5
NEK9-203ENST00000553945 MTUS2Q5JR59 1369 aa36.89■■■■□ 3.5
NEK9-203ENST00000553945 AKNAQ7Z591 1439 aa36.88■■■■□ 3.49
NEK9-203ENST00000553945 ARHGAP5Q13017 1502 aa36.82■■■■□ 3.48
NEK9-203ENST00000553945 EFCAB2Q5VUJ9 269 aa36.82■■■■□ 3.48
NEK9-203ENST00000553945 EHBP1L1Q8N3D4 1523 aa36.8■■■■□ 3.48
NEK9-203ENST00000553945 TIAM1Q13009 1591 aa36.8■■■■□ 3.48
NEK9-203ENST00000553945 RAPGEF3O95398 923 aa36.8■■■■□ 3.48
NEK9-203ENST00000553945 PREX2Q70Z35 1606 aa36.78■■■■□ 3.48
NEK9-203ENST00000553945 CDC42BPBQ9Y5S2 1711 aa36.78■■■■□ 3.48
NEK9-203ENST00000553945 CDC42BPAQ5VT25 1732 aa36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms