RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 CARMIL1Q5VZK9 1371 aa34.6■■■■□ 3.13
PRAF2-202ENST00000553851 PRG4Q92954 1404 aaPredicted RBP34.59■■■■□ 3.13
PRAF2-202ENST00000553851 RUSC2Q8N2Y8 1516 aa34.57■■■■□ 3.12
PRAF2-202ENST00000553851 KIAA0586Q9BVV6 1533 aa34.51■■■■□ 3.11
PRAF2-202ENST00000553851 RAPGEF2Q9Y4G8 1499 aa34.31■■■■□ 3.08
PRAF2-202ENST00000553851 IQGAP2Q13576 1575 aa34.2■■■■□ 3.07
PRAF2-202ENST00000553851 CARMIL2Q6F5E8 1435 aa34.17■■■■□ 3.06
PRAF2-202ENST00000553851 NPM1P06748 294 aaKnown RBP eCLIP34.15■■■■□ 3.06
PRAF2-202ENST00000553851 PTPRGP23470 1445 aa34.14■■■■□ 3.06
PRAF2-202ENST00000553851 TTBK1Q5TCY1 1321 aaPredicted RBP34.13■■■■□ 3.05
PRAF2-202ENST00000553851 TNIKQ9UKE5 1360 aa34.1■■■■□ 3.05
PRAF2-202ENST00000553851 PRXQ9BXM0 1461 aa34.08■■■■□ 3.05
PRAF2-202ENST00000553851 ADCY10Q96PN6 1610 aa34.07■■■■□ 3.05
PRAF2-202ENST00000553851 DISP1Q96F81 1524 aa34.04■■■■□ 3.04
PRAF2-202ENST00000553851 UGGT2Q9NYU1 1516 aa34.02■■■■□ 3.04
PRAF2-202ENST00000553851 CSRNP3Q8WYN3 585 aa34.01■■■■□ 3.03
PRAF2-202ENST00000553851 MAPKBP1O60336 1514 aa33.93■■■■□ 3.02
PRAF2-202ENST00000553851 CTTNBP2Q8WZ74 1663 aa33.93■■■■□ 3.02
PRAF2-202ENST00000553851 FAM69CQ0P6D2 419 aa33.91■■■■□ 3.02
PRAF2-202ENST00000553851 KIF13AQ9H1H9 1805 aa33.89■■■■□ 3.02
PRAF2-202ENST00000553851 ABCC10Q5T3U5 1492 aa33.89■■■■□ 3.02
PRAF2-202ENST00000553851 KIAA0556O60303 1618 aa33.88■■■■□ 3.01
PRAF2-202ENST00000553851 EEA1Q15075 1411 aa33.87■■■■□ 3.01
PRAF2-202ENST00000553851 UACAQ9BZF9 1416 aa33.87■■■■□ 3.01
PRAF2-202ENST00000553851 ABCC2Q92887 1545 aa33.85■■■■□ 3.01
PRAF2-202ENST00000553851 FAM9AQ8IZU1 332 aaPredicted RBP33.83■■■■□ 3.01
PRAF2-202ENST00000553851 UHRF1BP1LA0JNW5 1464 aa33.83■■■■□ 3.01
PRAF2-202ENST00000553851 GOLGA3Q08378 1498 aa33.81■■■■□ 3
PRAF2-202ENST00000553851 CHIC1Q5VXU3 224 aa33.8■■■■□ 3
PRAF2-202ENST00000553851 DIP2BQ9P265 1576 aa33.77■■■■□ 3
PRAF2-202ENST00000553851 ASXL2Q76L83 1435 aa33.71■■■□□ 2.99
PRAF2-202ENST00000553851 PLB1Q6P1J6 1458 aa33.68■■■□□ 2.98
PRAF2-202ENST00000553851 KDM5BQ9UGL1 1544 aa33.68■■■□□ 2.98
PRAF2-202ENST00000553851 P3H3Q8IVL6 736 aa33.65■■■□□ 2.98
PRAF2-202ENST00000553851 ZCCHC11Q5TAX3 1644 aaKnown RBP33.58■■■□□ 2.97
PRAF2-202ENST00000553851 ABCA8O94911 1581 aa33.57■■■□□ 2.96
PRAF2-202ENST00000553851 RANGAP1P46060 587 aaPredicted RBP33.54■■■□□ 2.96
PRAF2-202ENST00000553851 TSPOAP1O95153 1857 aa33.53■■■□□ 2.96
PRAF2-202ENST00000553851 KIF21BO75037 1637 aa33.52■■■□□ 2.96
PRAF2-202ENST00000553851 GLI2P10070 1586 aa33.5■■■□□ 2.95
PRAF2-202ENST00000553851 SAMD9Q5K651 1589 aa33.5■■■□□ 2.95
PRAF2-202ENST00000553851 EPRSP07814 1512 aaKnown RBP33.48■■■□□ 2.95
PRAF2-202ENST00000553851 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
PRAF2-202ENST00000553851 WDR7Q9Y4E6 1490 aa33.43■■■□□ 2.94
PRAF2-202ENST00000553851 ARID3CA6NKF2 412 aa33.4■■■□□ 2.94
PRAF2-202ENST00000553851 UBTFP17480 764 aaKnown RBP33.4■■■□□ 2.94
PRAF2-202ENST00000553851 KCNH8Q96L42 1107 aa33.37■■■□□ 2.93
PRAF2-202ENST00000553851 KDM6BO15054 1643 aa33.36■■■□□ 2.93
PRAF2-202ENST00000553851 FHOD3Q2V2M9 1422 aa33.35■■■□□ 2.93
PRAF2-202ENST00000553851 ATP10BO94823 1461 aa33.34■■■□□ 2.93
PRAF2-202ENST00000553851 PPRC1Q5VV67 1664 aaKnown RBP33.33■■■□□ 2.93
PRAF2-202ENST00000553851 MAP3K4Q9Y6R4 1608 aa33.32■■■□□ 2.92
PRAF2-202ENST00000553851 RAPGEF6Q8TEU7 1601 aa33.29■■■□□ 2.92
PRAF2-202ENST00000553851 EFCAB5A4FU69 1503 aa33.27■■■□□ 2.92
PRAF2-202ENST00000553851 TEX14Q8IWB6 1497 aa33.24■■■□□ 2.91
PRAF2-202ENST00000553851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.24■■■□□ 2.91
PRAF2-202ENST00000553851 HNRNPUL2Q1KMD3 747 aaKnown RBP33.24■■■□□ 2.91
PRAF2-202ENST00000553851 AEBP2Q6ZN18 517 aaPredicted RBP33.23■■■□□ 2.91
PRAF2-202ENST00000553851 CD109Q6YHK3 1445 aa33.22■■■□□ 2.91
PRAF2-202ENST00000553851 NUP153P49790 1475 aaKnown RBP33.19■■■□□ 2.9
PRAF2-202ENST00000553851 COL17A1Q9UMD9 1497 aaPredicted RBP33.15■■■□□ 2.9
PRAF2-202ENST00000553851 CFAP43Q8NDM7 1665 aa33.14■■■□□ 2.9
PRAF2-202ENST00000553851 MAGI3Q5TCQ9 1506 aa33.13■■■□□ 2.89
PRAF2-202ENST00000553851 ARHGAP35Q9NRY4 1499 aa33.08■■■□□ 2.89
PRAF2-202ENST00000553851 PLEKHD1A6NEE1 506 aa33.05■■■□□ 2.88
PRAF2-202ENST00000553851 FMN1Q68DA7 1419 aa33.01■■■□□ 2.87
PRAF2-202ENST00000553851 ATP1B4Q9UN42 357 aaPredicted RBP33■■■□□ 2.87
PRAF2-202ENST00000553851 ABCA9Q8IUA7 1624 aa32.99■■■□□ 2.87
PRAF2-202ENST00000553851 CDK13Q14004 1512 aaKnown RBP32.92■■■□□ 2.86
PRAF2-202ENST00000553851 KDM4FA0A1W2PPD8 638 aa32.91■■■□□ 2.86
PRAF2-202ENST00000553851 HECW1Q76N89 1606 aa32.87■■■□□ 2.85
PRAF2-202ENST00000553851 PHLDB1Q86UU1 1377 aa32.86■■■□□ 2.85
PRAF2-202ENST00000553851 ARAP3Q8WWN8 1544 aa32.86■■■□□ 2.85
PRAF2-202ENST00000553851 NEO1Q92859 1461 aa32.81■■■□□ 2.84
PRAF2-202ENST00000553851 CDK11AQ9UQ88 783 aaPredicted RBP32.8■■■□□ 2.84
PRAF2-202ENST00000553851 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.79■■■□□ 2.84
PRAF2-202ENST00000553851 RAPGEF3O95398 923 aa32.76■■■□□ 2.83
PRAF2-202ENST00000553851 CLIP1P30622 1438 aa32.75■■■□□ 2.83
PRAF2-202ENST00000553851 TTC37Q6PGP7 1564 aa32.72■■■□□ 2.83
PRAF2-202ENST00000553851 CASKIN1Q8WXD9 1431 aa32.71■■■□□ 2.83
PRAF2-202ENST00000553851 ADGRL1O94910 1474 aa32.71■■■□□ 2.83
PRAF2-202ENST00000553851 FANCAO15360 1455 aa32.68■■■□□ 2.82
PRAF2-202ENST00000553851 AKNAQ7Z591 1439 aa32.67■■■□□ 2.82
PRAF2-202ENST00000553851 PCF11O94913 1555 aaKnown RBP32.65■■■□□ 2.82
PRAF2-202ENST00000553851 LRRIQ1Q96JM4 1722 aa32.65■■■□□ 2.82
PRAF2-202ENST00000553851 TROQ12816 1431 aaPredicted RBP32.65■■■□□ 2.82
PRAF2-202ENST00000553851 PLCH2O75038 1416 aa32.63■■■□□ 2.81
PRAF2-202ENST00000553851 CFAP74Q9C0B2 1584 aa32.61■■■□□ 2.81
PRAF2-202ENST00000553851 DENND4BO75064 1496 aaPredicted RBP32.61■■■□□ 2.81
PRAF2-202ENST00000553851 CCDC18Q5T9S5 1454 aa32.6■■■□□ 2.81
PRAF2-202ENST00000553851 FRMPD1Q5SYB0 1578 aa32.58■■■□□ 2.81
PRAF2-202ENST00000553851 FYCO1Q9BQS8 1478 aa32.57■■■□□ 2.8
PRAF2-202ENST00000553851 KIF14Q15058 1648 aa32.57■■■□□ 2.8
PRAF2-202ENST00000553851 EFCAB2Q5VUJ9 269 aa32.55■■■□□ 2.8
PRAF2-202ENST00000553851 MYO5CQ9NQX4 1742 aa32.5■■■□□ 2.79
PRAF2-202ENST00000553851 RICTORQ6R327 1708 aa32.5■■■□□ 2.79
PRAF2-202ENST00000553851 SCAPERQ9BY12 1400 aa32.49■■■□□ 2.79
PRAF2-202ENST00000553851 CEP162Q5TB80 1403 aa32.48■■■□□ 2.79
PRAF2-202ENST00000553851 LOC105371045A0A1W2PR82 267 aa32.48■■■□□ 2.79
PRAF2-202ENST00000553851 ARHGAP5Q13017 1502 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms