RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
PRKCH-208ENST00000553846 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-208ENST00000553846 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
PRKCH-208ENST00000553846 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
PRKCH-208ENST00000553846 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
PRKCH-208ENST00000553846 KDM6BO15054 1643 aa16.69■□□□□ 0.26
PRKCH-208ENST00000553846 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
PRKCH-208ENST00000553846 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
PRKCH-208ENST00000553846 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
PRKCH-208ENST00000553846 TSPOAP1O95153 1857 aa16.6■□□□□ 0.25
PRKCH-208ENST00000553846 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
PRKCH-208ENST00000553846 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
PRKCH-208ENST00000553846 GLI2P10070 1586 aa16.54■□□□□ 0.24
PRKCH-208ENST00000553846 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRKCH-208ENST00000553846 CUL7Q14999 1698 aa16.53■□□□□ 0.24
PRKCH-208ENST00000553846 IGF1RP08069 1367 aa16.51■□□□□ 0.23
PRKCH-208ENST00000553846 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
PRKCH-208ENST00000553846 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
PRKCH-208ENST00000553846 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-208ENST00000553846 ASXL2Q76L83 1435 aa16.46■□□□□ 0.23
PRKCH-208ENST00000553846 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
PRKCH-208ENST00000553846 PTPRGP23470 1445 aa16.45■□□□□ 0.22
PRKCH-208ENST00000553846 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
PRKCH-208ENST00000553846 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
PRKCH-208ENST00000553846 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
PRKCH-208ENST00000553846 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
PRKCH-208ENST00000553846 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
PRKCH-208ENST00000553846 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
PRKCH-208ENST00000553846 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
PRKCH-208ENST00000553846 DISP1Q96F81 1524 aa16.4■□□□□ 0.22
PRKCH-208ENST00000553846 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
PRKCH-208ENST00000553846 KDM5BQ9UGL1 1544 aa16.39■□□□□ 0.21
PRKCH-208ENST00000553846 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
PRKCH-208ENST00000553846 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
PRKCH-208ENST00000553846 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
PRKCH-208ENST00000553846 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
PRKCH-208ENST00000553846 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
PRKCH-208ENST00000553846 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
PRKCH-208ENST00000553846 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
PRKCH-208ENST00000553846 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
PRKCH-208ENST00000553846 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
PRKCH-208ENST00000553846 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-208ENST00000553846 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
PRKCH-208ENST00000553846 ABCA8O94911 1581 aa16.17■□□□□ 0.18
PRKCH-208ENST00000553846 KIF21BO75037 1637 aa16.17■□□□□ 0.18
PRKCH-208ENST00000553846 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
PRKCH-208ENST00000553846 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
PRKCH-208ENST00000553846 ADAMTSL3P82987 1691 aa16.12■□□□□ 0.17
PRKCH-208ENST00000553846 ARAP3Q8WWN8 1544 aa16.12■□□□□ 0.17
PRKCH-208ENST00000553846 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
PRKCH-208ENST00000553846 FBXO41Q8TF61 875 aa16.09■□□□□ 0.17
PRKCH-208ENST00000553846 PTPRMP28827 1452 aa16.06■□□□□ 0.16
PRKCH-208ENST00000553846 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
PRKCH-208ENST00000553846 FRMPD1Q5SYB0 1578 aa16.04■□□□□ 0.16
PRKCH-208ENST00000553846 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
PRKCH-208ENST00000553846 BCORL1Q5H9F3 1711 aa16.01■□□□□ 0.15
PRKCH-208ENST00000553846 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
PRKCH-208ENST00000553846 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
PRKCH-208ENST00000553846 ATP10BO94823 1461 aa15.98■□□□□ 0.15
PRKCH-208ENST00000553846 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
PRKCH-208ENST00000553846 MADDQ8WXG6 1647 aa15.98■□□□□ 0.15
PRKCH-208ENST00000553846 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
PRKCH-208ENST00000553846 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
PRKCH-208ENST00000553846 NEO1Q92859 1461 aa15.95■□□□□ 0.14
PRKCH-208ENST00000553846 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
PRKCH-208ENST00000553846 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
PRKCH-208ENST00000553846 RICTORQ6R327 1708 aa15.9■□□□□ 0.14
PRKCH-208ENST00000553846 SIGLEC1Q9BZZ2 1709 aa15.9■□□□□ 0.14
PRKCH-208ENST00000553846 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
PRKCH-208ENST00000553846 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
PRKCH-208ENST00000553846 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
PRKCH-208ENST00000553846 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
PRKCH-208ENST00000553846 NUP153P49790 1475 aaKnown RBP15.84■□□□□ 0.13
PRKCH-208ENST00000553846 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.12
PRKCH-208ENST00000553846 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
PRKCH-208ENST00000553846 TTC37Q6PGP7 1564 aa15.79■□□□□ 0.12
PRKCH-208ENST00000553846 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
PRKCH-208ENST00000553846 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.11
PRKCH-208ENST00000553846 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
PRKCH-208ENST00000553846 HSPA2P54652 639 aa15.76■□□□□ 0.11
PRKCH-208ENST00000553846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
PRKCH-208ENST00000553846 AKNAQ7Z591 1439 aa15.76■□□□□ 0.11
PRKCH-208ENST00000553846 FANCAO15360 1455 aa15.75■□□□□ 0.11
PRKCH-208ENST00000553846 ZFYVE16Q7Z3T8 1539 aa15.74■□□□□ 0.11
PRKCH-208ENST00000553846 P3H3Q8IVL6 736 aa15.74■□□□□ 0.11
PRKCH-208ENST00000553846 EFCAB5A4FU69 1503 aa15.73■□□□□ 0.11
PRKCH-208ENST00000553846 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
PRKCH-208ENST00000553846 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
PRKCH-208ENST00000553846 MAGI2Q86UL8 1455 aa15.72■□□□□ 0.11
PRKCH-208ENST00000553846 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
PRKCH-208ENST00000553846 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
PRKCH-208ENST00000553846 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
PRKCH-208ENST00000553846 STRCQ7RTU9 1775 aa15.7■□□□□ 0.1
PRKCH-208ENST00000553846 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
PRKCH-208ENST00000553846 PREX1Q8TCU6 1659 aa15.69■□□□□ 0.1
PRKCH-208ENST00000553846 ILDR2Q71H61 639 aa15.66■□□□□ 0.1
PRKCH-208ENST00000553846 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
PRKCH-208ENST00000553846 PLCH2O75038 1416 aa15.61■□□□□ 0.09
PRKCH-208ENST00000553846 ATP10AO60312 1499 aa15.61■□□□□ 0.09
PRKCH-208ENST00000553846 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms