RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
PRKCH-206ENST00000553830 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
PRKCH-206ENST00000553830 NUP160Q12769 1436 aa22.74■■□□□ 1.23
PRKCH-206ENST00000553830 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
PRKCH-206ENST00000553830 KIAA0586Q9BVV6 1533 aa22.67■■□□□ 1.22
PRKCH-206ENST00000553830 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
PRKCH-206ENST00000553830 CLIP1P30622 1438 aa22.63■■□□□ 1.21
PRKCH-206ENST00000553830 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
PRKCH-206ENST00000553830 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
PRKCH-206ENST00000553830 P3H3Q8IVL6 736 aa22.57■■□□□ 1.2
PRKCH-206ENST00000553830 UGGT2Q9NYU1 1516 aa22.55■■□□□ 1.2
PRKCH-206ENST00000553830 JPH4Q96JJ6 628 aa22.54■■□□□ 1.2
PRKCH-206ENST00000553830 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
PRKCH-206ENST00000553830 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
PRKCH-206ENST00000553830 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
PRKCH-206ENST00000553830 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.19
PRKCH-206ENST00000553830 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
PRKCH-206ENST00000553830 FHOD3Q2V2M9 1422 aa22.49■■□□□ 1.19
PRKCH-206ENST00000553830 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
PRKCH-206ENST00000553830 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
PRKCH-206ENST00000553830 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
PRKCH-206ENST00000553830 DISP1Q96F81 1524 aa22.47■■□□□ 1.19
PRKCH-206ENST00000553830 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
PRKCH-206ENST00000553830 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
PRKCH-206ENST00000553830 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
PRKCH-206ENST00000553830 PCF11O94913 1555 aaKnown RBP22.31■■□□□ 1.16
PRKCH-206ENST00000553830 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
PRKCH-206ENST00000553830 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
PRKCH-206ENST00000553830 ARHGEF11O15085 1522 aa22.28■■□□□ 1.16
PRKCH-206ENST00000553830 PTPRGP23470 1445 aa22.27■■□□□ 1.16
PRKCH-206ENST00000553830 RIMBP3CA6NJZ7 1639 aa22.27■■□□□ 1.16
PRKCH-206ENST00000553830 RIMBP3BA6NNM3 1639 aa22.27■■□□□ 1.16
PRKCH-206ENST00000553830 RIMBP3Q9UFD9 1639 aa22.27■■□□□ 1.16
PRKCH-206ENST00000553830 RAPGEF6Q8TEU7 1601 aa22.24■■□□□ 1.15
PRKCH-206ENST00000553830 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
PRKCH-206ENST00000553830 ARID3CA6NKF2 412 aa22.21■■□□□ 1.15
PRKCH-206ENST00000553830 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
PRKCH-206ENST00000553830 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
PRKCH-206ENST00000553830 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
PRKCH-206ENST00000553830 FYCO1Q9BQS8 1478 aa22.19■■□□□ 1.14
PRKCH-206ENST00000553830 ABCA8O94911 1581 aa22.18■■□□□ 1.14
PRKCH-206ENST00000553830 APLP2Q06481 763 aa22.14■■□□□ 1.13
PRKCH-206ENST00000553830 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
PRKCH-206ENST00000553830 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
PRKCH-206ENST00000553830 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
PRKCH-206ENST00000553830 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
PRKCH-206ENST00000553830 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
PRKCH-206ENST00000553830 ABCC2Q92887 1545 aa22.1■■□□□ 1.13
PRKCH-206ENST00000553830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
PRKCH-206ENST00000553830 HNRNPUL2Q1KMD3 747 aaKnown RBP22.09■■□□□ 1.13
PRKCH-206ENST00000553830 ADCY10Q96PN6 1610 aa22.09■■□□□ 1.13
PRKCH-206ENST00000553830 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
PRKCH-206ENST00000553830 TIAM1Q13009 1591 aa22.08■■□□□ 1.12
PRKCH-206ENST00000553830 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
PRKCH-206ENST00000553830 CCDC18Q5T9S5 1454 aa22.04■■□□□ 1.12
PRKCH-206ENST00000553830 UHRF1BP1LA0JNW5 1464 aa22.03■■□□□ 1.12
PRKCH-206ENST00000553830 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.12
PRKCH-206ENST00000553830 ATP10BO94823 1461 aa21.99■■□□□ 1.11
PRKCH-206ENST00000553830 KANK4Q5T7N3 995 aaPredicted RBP21.97■■□□□ 1.11
PRKCH-206ENST00000553830 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
PRKCH-206ENST00000553830 MAP3K1Q13233 1512 aa21.96■■□□□ 1.11
PRKCH-206ENST00000553830 MAGI3Q5TCQ9 1506 aa21.94■■□□□ 1.1
PRKCH-206ENST00000553830 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
PRKCH-206ENST00000553830 LRRC9Q6ZRR7 1453 aa21.93■■□□□ 1.1
PRKCH-206ENST00000553830 KDM5BQ9UGL1 1544 aa21.93■■□□□ 1.1
PRKCH-206ENST00000553830 NPM1P06748 294 aaKnown RBP eCLIP21.91■■□□□ 1.1
PRKCH-206ENST00000553830 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
PRKCH-206ENST00000553830 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
PRKCH-206ENST00000553830 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
PRKCH-206ENST00000553830 SUPT6HQ7KZ85 1726 aaKnown RBP21.86■■□□□ 1.09
PRKCH-206ENST00000553830 KIF14Q15058 1648 aa21.84■■□□□ 1.09
PRKCH-206ENST00000553830 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
PRKCH-206ENST00000553830 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
PRKCH-206ENST00000553830 KCNH8Q96L42 1107 aa21.81■■□□□ 1.08
PRKCH-206ENST00000553830 WDR7Q9Y4E6 1490 aa21.79■■□□□ 1.08
PRKCH-206ENST00000553830 NCOA2Q15596 1464 aa21.77■■□□□ 1.08
PRKCH-206ENST00000553830 MAPKBP1O60336 1514 aa21.73■■□□□ 1.07
PRKCH-206ENST00000553830 TTC37Q6PGP7 1564 aa21.72■■□□□ 1.07
PRKCH-206ENST00000553830 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
PRKCH-206ENST00000553830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.7■■□□□ 1.06
PRKCH-206ENST00000553830 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
PRKCH-206ENST00000553830 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
PRKCH-206ENST00000553830 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
PRKCH-206ENST00000553830 MYO5CQ9NQX4 1742 aa21.68■■□□□ 1.06
PRKCH-206ENST00000553830 ABCC10Q5T3U5 1492 aa21.67■■□□□ 1.06
PRKCH-206ENST00000553830 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
PRKCH-206ENST00000553830 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
PRKCH-206ENST00000553830 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
PRKCH-206ENST00000553830 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
PRKCH-206ENST00000553830 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
PRKCH-206ENST00000553830 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
PRKCH-206ENST00000553830 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
PRKCH-206ENST00000553830 KIF13AQ9H1H9 1805 aa21.59■■□□□ 1.05
PRKCH-206ENST00000553830 FGD6Q6ZV73 1430 aa21.59■■□□□ 1.05
PRKCH-206ENST00000553830 PTPN23Q9H3S7 1636 aa21.58■■□□□ 1.05
PRKCH-206ENST00000553830 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.05
PRKCH-206ENST00000553830 ZNF777Q9ULD5 760 aaPredicted RBP21.58■■□□□ 1.05
PRKCH-206ENST00000553830 ARHGAP5Q13017 1502 aa21.58■■□□□ 1.04
PRKCH-206ENST00000553830 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
PRKCH-206ENST00000553830 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms