RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 ERCC6L2Q5T890 1561 aa17.31■□□□□ 0.36
HNRNPC-208ENST00000553753 KIAA0586Q9BVV6 1533 aa17.28■□□□□ 0.36
HNRNPC-208ENST00000553753 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
HNRNPC-208ENST00000553753 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
HNRNPC-208ENST00000553753 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
HNRNPC-208ENST00000553753 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
HNRNPC-208ENST00000553753 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
HNRNPC-208ENST00000553753 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
HNRNPC-208ENST00000553753 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
HNRNPC-208ENST00000553753 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
HNRNPC-208ENST00000553753 EEA1Q15075 1411 aa17.1■□□□□ 0.33
HNRNPC-208ENST00000553753 PTPRGP23470 1445 aa17.07■□□□□ 0.32
HNRNPC-208ENST00000553753 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
HNRNPC-208ENST00000553753 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
HNRNPC-208ENST00000553753 FAM9AQ8IZU1 332 aaPredicted RBP17.05■□□□□ 0.32
HNRNPC-208ENST00000553753 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
HNRNPC-208ENST00000553753 DISP1Q96F81 1524 aa17.05■□□□□ 0.32
HNRNPC-208ENST00000553753 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
HNRNPC-208ENST00000553753 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
HNRNPC-208ENST00000553753 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
HNRNPC-208ENST00000553753 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
HNRNPC-208ENST00000553753 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
HNRNPC-208ENST00000553753 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
HNRNPC-208ENST00000553753 MAPKBP1O60336 1514 aa16.94■□□□□ 0.3
HNRNPC-208ENST00000553753 UHRF1BP1LA0JNW5 1464 aa16.92■□□□□ 0.3
HNRNPC-208ENST00000553753 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
HNRNPC-208ENST00000553753 KIF21BO75037 1637 aa16.91■□□□□ 0.3
HNRNPC-208ENST00000553753 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
HNRNPC-208ENST00000553753 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
HNRNPC-208ENST00000553753 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
HNRNPC-208ENST00000553753 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
HNRNPC-208ENST00000553753 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
HNRNPC-208ENST00000553753 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
HNRNPC-208ENST00000553753 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
HNRNPC-208ENST00000553753 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
HNRNPC-208ENST00000553753 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
HNRNPC-208ENST00000553753 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
HNRNPC-208ENST00000553753 DIP2BQ9P265 1576 aa16.83■□□□□ 0.28
HNRNPC-208ENST00000553753 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
HNRNPC-208ENST00000553753 ABCA8O94911 1581 aa16.81■□□□□ 0.28
HNRNPC-208ENST00000553753 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
HNRNPC-208ENST00000553753 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
HNRNPC-208ENST00000553753 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
HNRNPC-208ENST00000553753 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
HNRNPC-208ENST00000553753 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
HNRNPC-208ENST00000553753 GLI2P10070 1586 aa16.72■□□□□ 0.27
HNRNPC-208ENST00000553753 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
HNRNPC-208ENST00000553753 WDR7Q9Y4E6 1490 aa16.71■□□□□ 0.27
HNRNPC-208ENST00000553753 TSPOAP1O95153 1857 aa16.71■□□□□ 0.26
HNRNPC-208ENST00000553753 ATP10BO94823 1461 aa16.7■□□□□ 0.26
HNRNPC-208ENST00000553753 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
HNRNPC-208ENST00000553753 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
HNRNPC-208ENST00000553753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
HNRNPC-208ENST00000553753 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
HNRNPC-208ENST00000553753 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
HNRNPC-208ENST00000553753 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
HNRNPC-208ENST00000553753 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
HNRNPC-208ENST00000553753 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
HNRNPC-208ENST00000553753 FMN1Q68DA7 1419 aa16.61■□□□□ 0.25
HNRNPC-208ENST00000553753 KDM6BO15054 1643 aa16.6■□□□□ 0.25
HNRNPC-208ENST00000553753 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
HNRNPC-208ENST00000553753 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
HNRNPC-208ENST00000553753 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
HNRNPC-208ENST00000553753 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
HNRNPC-208ENST00000553753 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-208ENST00000553753 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
HNRNPC-208ENST00000553753 CLIP1P30622 1438 aa16.52■□□□□ 0.24
HNRNPC-208ENST00000553753 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.23
HNRNPC-208ENST00000553753 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
HNRNPC-208ENST00000553753 ABCA9Q8IUA7 1624 aa16.51■□□□□ 0.23
HNRNPC-208ENST00000553753 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
HNRNPC-208ENST00000553753 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-208ENST00000553753 CASKIN1Q8WXD9 1431 aa16.46■□□□□ 0.23
HNRNPC-208ENST00000553753 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
HNRNPC-208ENST00000553753 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
HNRNPC-208ENST00000553753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.43■□□□□ 0.221e-13■■■□□ 15.2
HNRNPC-208ENST00000553753 PCF11O94913 1555 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-208ENST00000553753 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
HNRNPC-208ENST00000553753 ARAP3Q8WWN8 1544 aa16.41■□□□□ 0.22
HNRNPC-208ENST00000553753 LRRIQ1Q96JM4 1722 aa16.41■□□□□ 0.22
HNRNPC-208ENST00000553753 NEO1Q92859 1461 aa16.41■□□□□ 0.22
HNRNPC-208ENST00000553753 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
HNRNPC-208ENST00000553753 CCDC18Q5T9S5 1454 aa16.4■□□□□ 0.22
HNRNPC-208ENST00000553753 TTC37Q6PGP7 1564 aa16.39■□□□□ 0.21
HNRNPC-208ENST00000553753 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
HNRNPC-208ENST00000553753 FANCAO15360 1455 aa16.37■□□□□ 0.21
HNRNPC-208ENST00000553753 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
HNRNPC-208ENST00000553753 PLCH2O75038 1416 aa16.35■□□□□ 0.21
HNRNPC-208ENST00000553753 KIF14Q15058 1648 aa16.34■□□□□ 0.21
HNRNPC-208ENST00000553753 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
HNRNPC-208ENST00000553753 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
HNRNPC-208ENST00000553753 KDM4FA0A1W2PPD8 638 aa16.32■□□□□ 0.2
HNRNPC-208ENST00000553753 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
HNRNPC-208ENST00000553753 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
HNRNPC-208ENST00000553753 DENND4BO75064 1496 aaPredicted RBP16.3■□□□□ 0.2
HNRNPC-208ENST00000553753 ADGRL1O94910 1474 aa16.27■□□□□ 0.19
HNRNPC-208ENST00000553753 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
HNRNPC-208ENST00000553753 SCAPERQ9BY12 1400 aa16.26■□□□□ 0.19
HNRNPC-208ENST00000553753 ARHGAP5Q13017 1502 aa16.26■□□□□ 0.19
HNRNPC-208ENST00000553753 RICTORQ6R327 1708 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms