RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
CHD8-204ENST00000553622 TNIKQ9UKE5 1360 aa15.74■□□□□ 0.11
CHD8-204ENST00000553622 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
CHD8-204ENST00000553622 NUP160Q12769 1436 aa15.7■□□□□ 0.1
CHD8-204ENST00000553622 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
CHD8-204ENST00000553622 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
CHD8-204ENST00000553622 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
CHD8-204ENST00000553622 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
CHD8-204ENST00000553622 CLIP1P30622 1438 aa15.63■□□□□ 0.09
CHD8-204ENST00000553622 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
CHD8-204ENST00000553622 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
CHD8-204ENST00000553622 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.09
CHD8-204ENST00000553622 SHROOM2Q13796 1616 aa15.58■□□□□ 0.09
CHD8-204ENST00000553622 SAMD9Q5K651 1589 aa15.58■□□□□ 0.08
CHD8-204ENST00000553622 JPH4Q96JJ6 628 aa15.57■□□□□ 0.08
CHD8-204ENST00000553622 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
CHD8-204ENST00000553622 KIAA0556O60303 1618 aa15.56■□□□□ 0.08
CHD8-204ENST00000553622 PRG4Q92954 1404 aaPredicted RBP15.54■□□□□ 0.08
CHD8-204ENST00000553622 TTBK1Q5TCY1 1321 aaPredicted RBP15.54■□□□□ 0.08
CHD8-204ENST00000553622 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
CHD8-204ENST00000553622 CARMIL2Q6F5E8 1435 aa15.52■□□□□ 0.08
CHD8-204ENST00000553622 DISP1Q96F81 1524 aa15.52■□□□□ 0.07
CHD8-204ENST00000553622 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
CHD8-204ENST00000553622 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
CHD8-204ENST00000553622 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
CHD8-204ENST00000553622 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
CHD8-204ENST00000553622 ATP1B4Q9UN42 357 aaPredicted RBP15.42■□□□□ 0.06
CHD8-204ENST00000553622 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
CHD8-204ENST00000553622 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
CHD8-204ENST00000553622 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
CHD8-204ENST00000553622 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
CHD8-204ENST00000553622 ARHGEF11O15085 1522 aa15.4■□□□□ 0.06
CHD8-204ENST00000553622 PTPRGP23470 1445 aa15.4■□□□□ 0.06
CHD8-204ENST00000553622 RAPGEF6Q8TEU7 1601 aa15.39■□□□□ 0.05
CHD8-204ENST00000553622 HECW1Q76N89 1606 aa15.36■□□□□ 0.05
CHD8-204ENST00000553622 LRRIQ1Q96JM4 1722 aa15.36■□□□□ 0.05
CHD8-204ENST00000553622 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
CHD8-204ENST00000553622 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
CHD8-204ENST00000553622 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
CHD8-204ENST00000553622 ARID3CA6NKF2 412 aa15.33■□□□□ 0.04
CHD8-204ENST00000553622 APLP2Q06481 763 aa15.33■□□□□ 0.04
CHD8-204ENST00000553622 ABCA8O94911 1581 aa15.32■□□□□ 0.04
CHD8-204ENST00000553622 CFAP43Q8NDM7 1665 aa15.3■□□□□ 0.04
CHD8-204ENST00000553622 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
CHD8-204ENST00000553622 ABCC2Q92887 1545 aa15.28■□□□□ 0.04
CHD8-204ENST00000553622 ADCY10Q96PN6 1610 aa15.28■□□□□ 0.04
CHD8-204ENST00000553622 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.04
CHD8-204ENST00000553622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
CHD8-204ENST00000553622 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
CHD8-204ENST00000553622 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.03
CHD8-204ENST00000553622 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
CHD8-204ENST00000553622 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
CHD8-204ENST00000553622 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
CHD8-204ENST00000553622 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
CHD8-204ENST00000553622 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
CHD8-204ENST00000553622 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
CHD8-204ENST00000553622 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
CHD8-204ENST00000553622 ATP10BO94823 1461 aa15.2■□□□□ 0.02
CHD8-204ENST00000553622 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
CHD8-204ENST00000553622 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
CHD8-204ENST00000553622 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD8-204ENST00000553622 MTUS2Q5JR59 1369 aa15.16■□□□□ 0.02
CHD8-204ENST00000553622 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
CHD8-204ENST00000553622 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
CHD8-204ENST00000553622 KDM5BQ9UGL1 1544 aa15.16■□□□□ 0.02
CHD8-204ENST00000553622 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
CHD8-204ENST00000553622 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
CHD8-204ENST00000553622 MAGI3Q5TCQ9 1506 aa15.14■□□□□ 0.01
CHD8-204ENST00000553622 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
CHD8-204ENST00000553622 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
CHD8-204ENST00000553622 KIF14Q15058 1648 aa15.1■□□□□ 0.01
CHD8-204ENST00000553622 TROQ12816 1431 aaPredicted RBP15.09■□□□□ 0.01
CHD8-204ENST00000553622 ASXL2Q76L83 1435 aa15.08■□□□□ 0
CHD8-204ENST00000553622 KCNH8Q96L42 1107 aa15.07■□□□□ 0
CHD8-204ENST00000553622 WDR7Q9Y4E6 1490 aa15.07■□□□□ 0
CHD8-204ENST00000553622 NCOA2Q15596 1464 aa15.05■□□□□ -0
CHD8-204ENST00000553622 MAPKBP1O60336 1514 aa15.03■□□□□ -0
CHD8-204ENST00000553622 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
CHD8-204ENST00000553622 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
CHD8-204ENST00000553622 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
CHD8-204ENST00000553622 TTC37Q6PGP7 1564 aa15.02□□□□□ -0.01
CHD8-204ENST00000553622 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
CHD8-204ENST00000553622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHD8-204ENST00000553622 PHLDB1Q86UU1 1377 aa14.98□□□□□ -0.01
CHD8-204ENST00000553622 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
CHD8-204ENST00000553622 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
CHD8-204ENST00000553622 KIF13AQ9H1H9 1805 aa14.96□□□□□ -0.01
CHD8-204ENST00000553622 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
CHD8-204ENST00000553622 PREX2Q70Z35 1606 aa14.96□□□□□ -0.01
CHD8-204ENST00000553622 ABCA9Q8IUA7 1624 aa14.96□□□□□ -0.01
CHD8-204ENST00000553622 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
CHD8-204ENST00000553622 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
CHD8-204ENST00000553622 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
CHD8-204ENST00000553622 PTPN23Q9H3S7 1636 aa14.93□□□□□ -0.02
CHD8-204ENST00000553622 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
CHD8-204ENST00000553622 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
CHD8-204ENST00000553622 FAM69CQ0P6D2 419 aa14.91□□□□□ -0.02
CHD8-204ENST00000553622 FAM50AQ14320 339 aaKnown RBP14.91□□□□□ -0.02
CHD8-204ENST00000553622 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
CHD8-204ENST00000553622 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms