RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 JPH4Q96JJ6 628 aa40.02■■■■■ 4
TDP1-205ENST00000553527 PRG4Q92954 1404 aaPredicted RBP39.93■■■■□ 3.98
TDP1-205ENST00000553527 KIAA0586Q9BVV6 1533 aa39.87■■■■□ 3.97
TDP1-205ENST00000553527 TRHP20396 242 aaPredicted RBP39.79■■■■□ 3.96
TDP1-205ENST00000553527 RAPGEF2Q9Y4G8 1499 aa39.79■■■■□ 3.96
TDP1-205ENST00000553527 IQGAP2Q13576 1575 aa39.63■■■■□ 3.94
TDP1-205ENST00000553527 TTBK1Q5TCY1 1321 aaPredicted RBP39.6■■■■□ 3.93
TDP1-205ENST00000553527 CSRNP3Q8WYN3 585 aa39.55■■■■□ 3.92
TDP1-205ENST00000553527 CHIC1Q5VXU3 224 aa39.54■■■■□ 3.92
TDP1-205ENST00000553527 FAM9AQ8IZU1 332 aaPredicted RBP39.54■■■■□ 3.92
TDP1-205ENST00000553527 PRXQ9BXM0 1461 aa39.52■■■■□ 3.92
TDP1-205ENST00000553527 CARMIL2Q6F5E8 1435 aa39.49■■■■□ 3.91
TDP1-205ENST00000553527 CTTNBP2Q8WZ74 1663 aa39.47■■■■□ 3.91
TDP1-205ENST00000553527 PTPRGP23470 1445 aa39.42■■■■□ 3.9
TDP1-205ENST00000553527 EEA1Q15075 1411 aa39.39■■■■□ 3.9
TDP1-205ENST00000553527 TNIKQ9UKE5 1360 aa39.38■■■■□ 3.89
TDP1-205ENST00000553527 NPM1P06748 294 aaKnown RBP eCLIP39.38■■■■□ 3.89
TDP1-205ENST00000553527 DISP1Q96F81 1524 aa39.36■■■■□ 3.89
TDP1-205ENST00000553527 UGGT2Q9NYU1 1516 aa39.36■■■■□ 3.89
TDP1-205ENST00000553527 ADCY10Q96PN6 1610 aa39.34■■■■□ 3.89
TDP1-205ENST00000553527 KIAA0556O60303 1618 aa39.25■■■■□ 3.87
TDP1-205ENST00000553527 EHMT2Q96KQ7 1210 aa39.16■■■■□ 3.86
TDP1-205ENST00000553527 GOLGA3Q08378 1498 aa39.14■■■■□ 3.86
TDP1-205ENST00000553527 RANGAP1P46060 587 aaPredicted RBP39.11■■■■□ 3.85
TDP1-205ENST00000553527 UACAQ9BZF9 1416 aa39.11■■■■□ 3.85
TDP1-205ENST00000553527 P3H3Q8IVL6 736 aa39.1■■■■□ 3.85
TDP1-205ENST00000553527 KIF13AQ9H1H9 1805 aa39.1■■■■□ 3.85
TDP1-205ENST00000553527 MAPKBP1O60336 1514 aa39.07■■■■□ 3.84
TDP1-205ENST00000553527 FAM69CQ0P6D2 419 aa39.05■■■■□ 3.84
TDP1-205ENST00000553527 KIF21BO75037 1637 aa39.04■■■■□ 3.84
TDP1-205ENST00000553527 ABCC2Q92887 1545 aa39.04■■■■□ 3.84
TDP1-205ENST00000553527 UHRF1BP1LA0JNW5 1464 aa39.02■■■■□ 3.84
TDP1-205ENST00000553527 ABCC10Q5T3U5 1492 aa38.98■■■■□ 3.83
TDP1-205ENST00000553527 PLB1Q6P1J6 1458 aa38.95■■■■□ 3.83
TDP1-205ENST00000553527 UBTFP17480 764 aaKnown RBP38.93■■■■□ 3.82
TDP1-205ENST00000553527 DIP2BQ9P265 1576 aa38.91■■■■□ 3.82
TDP1-205ENST00000553527 ASXL2Q76L83 1435 aa38.88■■■■□ 3.81
TDP1-205ENST00000553527 SAMD9Q5K651 1589 aa38.87■■■■□ 3.81
TDP1-205ENST00000553527 ZCCHC11Q5TAX3 1644 aaKnown RBP38.86■■■■□ 3.81
TDP1-205ENST00000553527 KDM5BQ9UGL1 1544 aa38.86■■■■□ 3.81
TDP1-205ENST00000553527 ABCA8O94911 1581 aa38.82■■■■□ 3.81
TDP1-205ENST00000553527 TSPOAP1O95153 1857 aa38.81■■■■□ 3.8
TDP1-205ENST00000553527 ARID3CA6NKF2 412 aa38.77■■■■□ 3.8
TDP1-205ENST00000553527 FHOD3Q2V2M9 1422 aa38.72■■■■□ 3.79
TDP1-205ENST00000553527 RAPGEF6Q8TEU7 1601 aa38.62■■■■□ 3.77
TDP1-205ENST00000553527 EFCAB5A4FU69 1503 aa38.62■■■■□ 3.77
TDP1-205ENST00000553527 KCNH8Q96L42 1107 aa38.61■■■■□ 3.77
TDP1-205ENST00000553527 EPRSP07814 1512 aaKnown RBP38.61■■■■□ 3.77
TDP1-205ENST00000553527 GLI2P10070 1586 aa38.6■■■■□ 3.77
TDP1-205ENST00000553527 WDR7Q9Y4E6 1490 aa38.6■■■■□ 3.77
TDP1-205ENST00000553527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.57■■■■□ 3.76
TDP1-205ENST00000553527 HNRNPUL2Q1KMD3 747 aaKnown RBP38.57■■■■□ 3.76
TDP1-205ENST00000553527 ATP10BO94823 1461 aa38.56■■■■□ 3.76
TDP1-205ENST00000553527 MAP3K4Q9Y6R4 1608 aa38.46■■■■□ 3.75
TDP1-205ENST00000553527 PPRC1Q5VV67 1664 aaKnown RBP38.46■■■■□ 3.75
TDP1-205ENST00000553527 ARHGAP35Q9NRY4 1499 aa38.45■■■■□ 3.75
TDP1-205ENST00000553527 NUP153P49790 1475 aaKnown RBP38.44■■■■□ 3.74
TDP1-205ENST00000553527 KDM6BO15054 1643 aa38.42■■■■□ 3.74
TDP1-205ENST00000553527 ATP1B4Q9UN42 357 aaPredicted RBP38.41■■■■□ 3.74
TDP1-205ENST00000553527 CD109Q6YHK3 1445 aa38.33■■■■□ 3.73
TDP1-205ENST00000553527 CFAP43Q8NDM7 1665 aa38.31■■■■□ 3.72
TDP1-205ENST00000553527 FMN1Q68DA7 1419 aa38.3■■■■□ 3.72
TDP1-205ENST00000553527 TEX14Q8IWB6 1497 aa38.29■■■■□ 3.72
TDP1-205ENST00000553527 PLEKHD1A6NEE1 506 aa38.27■■■■□ 3.72
TDP1-205ENST00000553527 CDK13Q14004 1512 aaKnown RBP38.21■■■■□ 3.71
TDP1-205ENST00000553527 MAGI3Q5TCQ9 1506 aa38.17■■■■□ 3.7
TDP1-205ENST00000553527 HECW1Q76N89 1606 aa38.17■■■■□ 3.7
TDP1-205ENST00000553527 COL17A1Q9UMD9 1497 aaPredicted RBP38.15■■■■□ 3.7
TDP1-205ENST00000553527 CLIP1P30622 1438 aa38.15■■■■□ 3.7
TDP1-205ENST00000553527 ABCA9Q8IUA7 1624 aa38.15■■■■□ 3.7
TDP1-205ENST00000553527 LOC105371045A0A1W2PR82 267 aa38.05■■■■□ 3.68
TDP1-205ENST00000553527 LRRIQ1Q96JM4 1722 aa38.04■■■■□ 3.68
TDP1-205ENST00000553527 CDK11AQ9UQ88 783 aaPredicted RBP38.02■■■■□ 3.68
TDP1-205ENST00000553527 PCF11O94913 1555 aaKnown RBP38.01■■■■□ 3.67
TDP1-205ENST00000553527 AEBP2Q6ZN18 517 aaPredicted RBP37.99■■■■□ 3.67
TDP1-205ENST00000553527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.97■■■■□ 3.67
TDP1-205ENST00000553527 CASKIN1Q8WXD9 1431 aa37.97■■■■□ 3.67
TDP1-205ENST00000553527 TTC37Q6PGP7 1564 aa37.92■■■■□ 3.66
TDP1-205ENST00000553527 CEP162Q5TB80 1403 aa37.9■■■■□ 3.66
TDP1-205ENST00000553527 ARAP3Q8WWN8 1544 aa37.86■■■■□ 3.65
TDP1-205ENST00000553527 NEO1Q92859 1461 aa37.85■■■■□ 3.65
TDP1-205ENST00000553527 FYCO1Q9BQS8 1478 aa37.85■■■■□ 3.65
TDP1-205ENST00000553527 PHLDB1Q86UU1 1377 aa37.85■■■■□ 3.65
TDP1-205ENST00000553527 CCDC18Q5T9S5 1454 aa37.84■■■■□ 3.65
TDP1-205ENST00000553527 TROQ12816 1431 aaPredicted RBP37.83■■■■□ 3.65
TDP1-205ENST00000553527 RAPGEF3O95398 923 aa37.82■■■■□ 3.64
TDP1-205ENST00000553527 KIF14Q15058 1648 aa37.82■■■■□ 3.64
TDP1-205ENST00000553527 FANCAO15360 1455 aa37.79■■■■□ 3.64
TDP1-205ENST00000553527 AKNAQ7Z591 1439 aa37.75■■■■□ 3.63
TDP1-205ENST00000553527 MYO5CQ9NQX4 1742 aa37.74■■■■□ 3.63
TDP1-205ENST00000553527 PLCH2O75038 1416 aa37.73■■■■□ 3.63
TDP1-205ENST00000553527 KDM4FA0A1W2PPD8 638 aa37.73■■■■□ 3.63
TDP1-205ENST00000553527 CFAP74Q9C0B2 1584 aa37.72■■■■□ 3.63
TDP1-205ENST00000553527 EFCAB2Q5VUJ9 269 aa37.65■■■■□ 3.62
TDP1-205ENST00000553527 DENND4BO75064 1496 aaPredicted RBP37.64■■■■□ 3.62
TDP1-205ENST00000553527 FRMPD1Q5SYB0 1578 aa37.62■■■■□ 3.61
TDP1-205ENST00000553527 ARHGAP5Q13017 1502 aa37.6■■■■□ 3.61
TDP1-205ENST00000553527 RICTORQ6R327 1708 aa37.58■■■■□ 3.61
TDP1-205ENST00000553527 ADGRL1O94910 1474 aa37.58■■■■□ 3.61
TDP1-205ENST00000553527 SCAPERQ9BY12 1400 aa37.57■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 332.3 ms