RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
NRDE2-202ENST00000553409 FANCIQ9NVI1 1328 aa15.95■□□□□ 0.14
NRDE2-202ENST00000553409 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
NRDE2-202ENST00000553409 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
NRDE2-202ENST00000553409 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
NRDE2-202ENST00000553409 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
NRDE2-202ENST00000553409 ERICH6Q7L0X2 663 aa15.91■□□□□ 0.14
NRDE2-202ENST00000553409 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
NRDE2-202ENST00000553409 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
NRDE2-202ENST00000553409 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
NRDE2-202ENST00000553409 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
NRDE2-202ENST00000553409 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
NRDE2-202ENST00000553409 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
NRDE2-202ENST00000553409 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
NRDE2-202ENST00000553409 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
NRDE2-202ENST00000553409 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
NRDE2-202ENST00000553409 CUX1P39880 1505 aa15.77■□□□□ 0.11
NRDE2-202ENST00000553409 DEKP35659 375 aaKnown RBP15.77■□□□□ 0.11
NRDE2-202ENST00000553409 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
NRDE2-202ENST00000553409 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
NRDE2-202ENST00000553409 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
NRDE2-202ENST00000553409 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
NRDE2-202ENST00000553409 ERICH6BQ5W0A0 696 aa15.71■□□□□ 0.11
NRDE2-202ENST00000553409 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
NRDE2-202ENST00000553409 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
NRDE2-202ENST00000553409 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
NRDE2-202ENST00000553409 IGF1RP08069 1367 aa15.67■□□□□ 0.1
NRDE2-202ENST00000553409 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
NRDE2-202ENST00000553409 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
NRDE2-202ENST00000553409 NBR1Q14596 966 aa15.64■□□□□ 0.09
NRDE2-202ENST00000553409 WASHC2AQ641Q2 1341 aa15.64■□□□□ 0.09
NRDE2-202ENST00000553409 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
NRDE2-202ENST00000553409 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
NRDE2-202ENST00000553409 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
NRDE2-202ENST00000553409 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
NRDE2-202ENST00000553409 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
NRDE2-202ENST00000553409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.59■□□□□ 0.09
NRDE2-202ENST00000553409 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
NRDE2-202ENST00000553409 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
NRDE2-202ENST00000553409 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.09
NRDE2-202ENST00000553409 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
NRDE2-202ENST00000553409 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
NRDE2-202ENST00000553409 KDM5BQ9UGL1 1544 aa15.56■□□□□ 0.08
NRDE2-202ENST00000553409 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
NRDE2-202ENST00000553409 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
NRDE2-202ENST00000553409 HFM1A2PYH4 1435 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
NRDE2-202ENST00000553409 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.085e-6■■■□□ 16.9
NRDE2-202ENST00000553409 CFTRP13569 1480 aa15.52■□□□□ 0.08
NRDE2-202ENST00000553409 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
NRDE2-202ENST00000553409 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
NRDE2-202ENST00000553409 C11orf95C9JLR9 678 aaPredicted RBP15.51■□□□□ 0.07
NRDE2-202ENST00000553409 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
NRDE2-202ENST00000553409 NAIPQ13075 1403 aa15.49■□□□□ 0.07
NRDE2-202ENST00000553409 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
NRDE2-202ENST00000553409 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
NRDE2-202ENST00000553409 FYCO1Q9BQS8 1478 aa15.48■□□□□ 0.07
NRDE2-202ENST00000553409 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
NRDE2-202ENST00000553409 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
NRDE2-202ENST00000553409 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
NRDE2-202ENST00000553409 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
NRDE2-202ENST00000553409 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.06
NRDE2-202ENST00000553409 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
NRDE2-202ENST00000553409 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
NRDE2-202ENST00000553409 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
NRDE2-202ENST00000553409 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
NRDE2-202ENST00000553409 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
NRDE2-202ENST00000553409 NCOA1Q15788 1441 aa15.41■□□□□ 0.06
NRDE2-202ENST00000553409 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
NRDE2-202ENST00000553409 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
NRDE2-202ENST00000553409 IL27Q8NEV9 243 aa15.39■□□□□ 0.05
NRDE2-202ENST00000553409 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
NRDE2-202ENST00000553409 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
NRDE2-202ENST00000553409 DENND4BO75064 1496 aaPredicted RBP15.38■□□□□ 0.05
NRDE2-202ENST00000553409 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
NRDE2-202ENST00000553409 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
NRDE2-202ENST00000553409 MYOM3Q5VTT5 1437 aa15.36■□□□□ 0.05
NRDE2-202ENST00000553409 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
NRDE2-202ENST00000553409 CNGB1Q14028 1251 aaPredicted RBP15.36■□□□□ 0.05
NRDE2-202ENST00000553409 FOXD1Q16676 465 aa15.36■□□□□ 0.05
NRDE2-202ENST00000553409 EFCAB5A4FU69 1503 aa15.35■□□□□ 0.05
NRDE2-202ENST00000553409 KIF7Q2M1P5 1343 aa15.35■□□□□ 0.05
NRDE2-202ENST00000553409 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
NRDE2-202ENST00000553409 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
NRDE2-202ENST00000553409 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.05
NRDE2-202ENST00000553409 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
NRDE2-202ENST00000553409 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
NRDE2-202ENST00000553409 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
NRDE2-202ENST00000553409 SPATA31E1Q6ZUB1 1445 aa15.27■□□□□ 0.04
NRDE2-202ENST00000553409 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
NRDE2-202ENST00000553409 KDM6BO15054 1643 aa15.26■□□□□ 0.03
NRDE2-202ENST00000553409 NEFMP07197 916 aa15.26■□□□□ 0.03
NRDE2-202ENST00000553409 HECW1Q76N89 1606 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms