RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
XRCC3-204ENST00000553361 CARMIL1Q5VZK9 1371 aa28.55■■■□□ 2.16
XRCC3-204ENST00000553361 KIAA0586Q9BVV6 1533 aa28.53■■■□□ 2.16
XRCC3-204ENST00000553361 NPM1P06748 294 aaKnown RBP eCLIP28.49■■■□□ 2.15
XRCC3-204ENST00000553361 CUL7Q14999 1698 aa28.48■■■□□ 2.15
XRCC3-204ENST00000553361 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
XRCC3-204ENST00000553361 FAM69CQ0P6D2 419 aa28.36■■■□□ 2.13
XRCC3-204ENST00000553361 PTPRGP23470 1445 aa28.33■■■□□ 2.13
XRCC3-204ENST00000553361 CARMIL2Q6F5E8 1435 aa28.28■■■□□ 2.12
XRCC3-204ENST00000553361 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.12
XRCC3-204ENST00000553361 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.11
XRCC3-204ENST00000553361 ABCC10Q5T3U5 1492 aa28.24■■■□□ 2.11
XRCC3-204ENST00000553361 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
XRCC3-204ENST00000553361 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
XRCC3-204ENST00000553361 IQGAP2Q13576 1575 aa28.2■■■□□ 2.11
XRCC3-204ENST00000553361 MAPKBP1O60336 1514 aa28.2■■■□□ 2.1
XRCC3-204ENST00000553361 KIF13AQ9H1H9 1805 aa28.18■■■□□ 2.1
XRCC3-204ENST00000553361 DISP1Q96F81 1524 aa28.12■■■□□ 2.09
XRCC3-204ENST00000553361 DIP2BQ9P265 1576 aa28.09■■■□□ 2.09
XRCC3-204ENST00000553361 UACAQ9BZF9 1416 aa28.08■■■□□ 2.09
XRCC3-204ENST00000553361 ABCC2Q92887 1545 aa28.08■■■□□ 2.08
XRCC3-204ENST00000553361 UGGT2Q9NYU1 1516 aa28.05■■■□□ 2.08
XRCC3-204ENST00000553361 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
XRCC3-204ENST00000553361 ASXL2Q76L83 1435 aa28.01■■■□□ 2.08
XRCC3-204ENST00000553361 PLB1Q6P1J6 1458 aa27.97■■■□□ 2.07
XRCC3-204ENST00000553361 PRXQ9BXM0 1461 aa27.96■■■□□ 2.07
XRCC3-204ENST00000553361 KIAA0556O60303 1618 aa27.93■■■□□ 2.06
XRCC3-204ENST00000553361 CSRNP3Q8WYN3 585 aa27.91■■■□□ 2.06
XRCC3-204ENST00000553361 KDM5BQ9UGL1 1544 aa27.89■■■□□ 2.06
XRCC3-204ENST00000553361 TSPOAP1O95153 1857 aa27.88■■■□□ 2.05
XRCC3-204ENST00000553361 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
XRCC3-204ENST00000553361 KDM6BO15054 1643 aa27.85■■■□□ 2.05
XRCC3-204ENST00000553361 P3H3Q8IVL6 736 aa27.84■■■□□ 2.05
XRCC3-204ENST00000553361 GLI2P10070 1586 aa27.82■■■□□ 2.04
XRCC3-204ENST00000553361 EPRSP07814 1512 aaKnown RBP27.81■■■□□ 2.04
XRCC3-204ENST00000553361 CTTNBP2Q8WZ74 1663 aa27.81■■■□□ 2.04
XRCC3-204ENST00000553361 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
XRCC3-204ENST00000553361 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
XRCC3-204ENST00000553361 ZCCHC11Q5TAX3 1644 aaKnown RBP27.77■■■□□ 2.04
XRCC3-204ENST00000553361 ARID3CA6NKF2 412 aa27.74■■■□□ 2.03
XRCC3-204ENST00000553361 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
XRCC3-204ENST00000553361 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
XRCC3-204ENST00000553361 ABCA8O94911 1581 aa27.7■■■□□ 2.03
XRCC3-204ENST00000553361 KDM4FA0A1W2PPD8 638 aa27.69■■■□□ 2.02
XRCC3-204ENST00000553361 EEA1Q15075 1411 aa27.67■■■□□ 2.02
XRCC3-204ENST00000553361 PPRC1Q5VV67 1664 aaKnown RBP27.66■■■□□ 2.02
XRCC3-204ENST00000553361 COL17A1Q9UMD9 1497 aaPredicted RBP27.65■■■□□ 2.02
XRCC3-204ENST00000553361 TEX14Q8IWB6 1497 aa27.64■■■□□ 2.01
XRCC3-204ENST00000553361 MAP3K4Q9Y6R4 1608 aa27.62■■■□□ 2.01
XRCC3-204ENST00000553361 CD109Q6YHK3 1445 aa27.61■■■□□ 2.01
XRCC3-204ENST00000553361 ATP10BO94823 1461 aa27.57■■■□□ 2
XRCC3-204ENST00000553361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
XRCC3-204ENST00000553361 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
XRCC3-204ENST00000553361 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
XRCC3-204ENST00000553361 SAMD9Q5K651 1589 aa27.5■■□□□ 1.99
XRCC3-204ENST00000553361 MAGI3Q5TCQ9 1506 aa27.5■■□□□ 1.99
XRCC3-204ENST00000553361 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
XRCC3-204ENST00000553361 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
XRCC3-204ENST00000553361 UBTFP17480 764 aaKnown RBP27.43■■□□□ 1.98
XRCC3-204ENST00000553361 CFAP43Q8NDM7 1665 aa27.42■■□□□ 1.98
XRCC3-204ENST00000553361 RAPGEF6Q8TEU7 1601 aa27.4■■□□□ 1.98
XRCC3-204ENST00000553361 ADGRL1O94910 1474 aa27.39■■□□□ 1.98
XRCC3-204ENST00000553361 NUP153P49790 1475 aaKnown RBP27.37■■□□□ 1.97
XRCC3-204ENST00000553361 PLEKHD1A6NEE1 506 aa27.36■■□□□ 1.97
XRCC3-204ENST00000553361 KIF21BO75037 1637 aa27.35■■□□□ 1.97
XRCC3-204ENST00000553361 RAPGEF3O95398 923 aa27.29■■□□□ 1.96
XRCC3-204ENST00000553361 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
XRCC3-204ENST00000553361 EFCAB5A4FU69 1503 aa27.27■■□□□ 1.96
XRCC3-204ENST00000553361 ARAP3Q8WWN8 1544 aa27.27■■□□□ 1.96
XRCC3-204ENST00000553361 PHLDB1Q86UU1 1377 aa27.27■■□□□ 1.96
XRCC3-204ENST00000553361 ABCA9Q8IUA7 1624 aa27.26■■□□□ 1.95
XRCC3-204ENST00000553361 NEO1Q92859 1461 aa27.19■■□□□ 1.94
XRCC3-204ENST00000553361 ARHGAP35Q9NRY4 1499 aa27.13■■□□□ 1.93
XRCC3-204ENST00000553361 CDK13Q14004 1512 aaKnown RBP27.13■■□□□ 1.93
XRCC3-204ENST00000553361 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
XRCC3-204ENST00000553361 AKNAQ7Z591 1439 aa27.09■■□□□ 1.93
XRCC3-204ENST00000553361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.08■■□□□ 1.932e-6■■■■■ 51.7
XRCC3-204ENST00000553361 ARID4BQ4LE39 1312 aaPredicted RBP27.08■■□□□ 1.93
XRCC3-204ENST00000553361 CDK11AQ9UQ88 783 aaPredicted RBP27.07■■□□□ 1.92
XRCC3-204ENST00000553361 FANCAO15360 1455 aa27.06■■□□□ 1.92
XRCC3-204ENST00000553361 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
XRCC3-204ENST00000553361 TTC37Q6PGP7 1564 aa27■■□□□ 1.91
XRCC3-204ENST00000553361 FRMPD1Q5SYB0 1578 aa26.99■■□□□ 1.91
XRCC3-204ENST00000553361 PLCH2O75038 1416 aa26.98■■□□□ 1.91
XRCC3-204ENST00000553361 HECW1Q76N89 1606 aa26.97■■□□□ 1.91
XRCC3-204ENST00000553361 EFCAB2Q5VUJ9 269 aa26.96■■□□□ 1.91
XRCC3-204ENST00000553361 HECW2Q9P2P5 1572 aa26.93■■□□□ 1.9
XRCC3-204ENST00000553361 SCAPERQ9BY12 1400 aa26.93■■□□□ 1.9
XRCC3-204ENST00000553361 CFAP74Q9C0B2 1584 aa26.91■■□□□ 1.9
XRCC3-204ENST00000553361 TROQ12816 1431 aaPredicted RBP26.9■■□□□ 1.9
XRCC3-204ENST00000553361 PTPRMP28827 1452 aa26.88■■□□□ 1.89
XRCC3-204ENST00000553361 CLIP1P30622 1438 aa26.87■■□□□ 1.89
XRCC3-204ENST00000553361 YEATS2Q9ULM3 1422 aa26.87■■□□□ 1.89
XRCC3-204ENST00000553361 RICTORQ6R327 1708 aa26.85■■□□□ 1.89
XRCC3-204ENST00000553361 ADAMTSL3P82987 1691 aa26.85■■□□□ 1.89
XRCC3-204ENST00000553361 ARHGEF40Q8TER5 1519 aa26.85■■□□□ 1.89
XRCC3-204ENST00000553361 CASKIN1Q8WXD9 1431 aa26.84■■□□□ 1.89
XRCC3-204ENST00000553361 MLECQ14165 292 aa26.84■■□□□ 1.89
XRCC3-204ENST00000553361 PLPPR3Q6T4P5 718 aa26.83■■□□□ 1.89
XRCC3-204ENST00000553361 POGZQ7Z3K3 1410 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms