RNA–Protein interactions for RNA: ENST00000553332.5

XRCC3-203, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-203ENST00000553332 JPH4Q96JJ6 628 aa24.31■■□□□ 1.48
XRCC3-203ENST00000553332 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
XRCC3-203ENST00000553332 KIAA0586Q9BVV6 1533 aa24.27■■□□□ 1.48
XRCC3-203ENST00000553332 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
XRCC3-203ENST00000553332 IQGAP2Q13576 1575 aa24.14■■□□□ 1.45
XRCC3-203ENST00000553332 TRHP20396 242 aaPredicted RBP24.1■■□□□ 1.45
XRCC3-203ENST00000553332 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
XRCC3-203ENST00000553332 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
XRCC3-203ENST00000553332 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
XRCC3-203ENST00000553332 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
XRCC3-203ENST00000553332 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
XRCC3-203ENST00000553332 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
XRCC3-203ENST00000553332 CARMIL2Q6F5E8 1435 aa24.02■■□□□ 1.44
XRCC3-203ENST00000553332 EEA1Q15075 1411 aa24.01■■□□□ 1.43
XRCC3-203ENST00000553332 DISP1Q96F81 1524 aa23.98■■□□□ 1.43
XRCC3-203ENST00000553332 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
XRCC3-203ENST00000553332 PTPRGP23470 1445 aa23.97■■□□□ 1.43
XRCC3-203ENST00000553332 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
XRCC3-203ENST00000553332 ADCY10Q96PN6 1610 aa23.95■■□□□ 1.42
XRCC3-203ENST00000553332 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
XRCC3-203ENST00000553332 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
XRCC3-203ENST00000553332 GOLGA3Q08378 1498 aa23.84■■□□□ 1.41
XRCC3-203ENST00000553332 KIF21BO75037 1637 aa23.82■■□□□ 1.4
XRCC3-203ENST00000553332 UACAQ9BZF9 1416 aa23.8■■□□□ 1.4
XRCC3-203ENST00000553332 KIF13AQ9H1H9 1805 aa23.8■■□□□ 1.4
XRCC3-203ENST00000553332 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
XRCC3-203ENST00000553332 MAPKBP1O60336 1514 aa23.78■■□□□ 1.4
XRCC3-203ENST00000553332 ABCC2Q92887 1545 aa23.76■■□□□ 1.39
XRCC3-203ENST00000553332 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
XRCC3-203ENST00000553332 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
XRCC3-203ENST00000553332 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
XRCC3-203ENST00000553332 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
XRCC3-203ENST00000553332 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
XRCC3-203ENST00000553332 PLB1Q6P1J6 1458 aa23.7■■□□□ 1.38
XRCC3-203ENST00000553332 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
XRCC3-203ENST00000553332 DIP2BQ9P265 1576 aa23.69■■□□□ 1.38
XRCC3-203ENST00000553332 UBTFP17480 764 aaKnown RBP23.67■■□□□ 1.38
XRCC3-203ENST00000553332 ZCCHC11Q5TAX3 1644 aaKnown RBP23.66■■□□□ 1.38
XRCC3-203ENST00000553332 ABCA8O94911 1581 aa23.65■■□□□ 1.38
XRCC3-203ENST00000553332 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
XRCC3-203ENST00000553332 ASXL2Q76L83 1435 aa23.64■■□□□ 1.37
XRCC3-203ENST00000553332 TSPOAP1O95153 1857 aa23.59■■□□□ 1.37
XRCC3-203ENST00000553332 FHOD3Q2V2M9 1422 aa23.58■■□□□ 1.36
XRCC3-203ENST00000553332 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
XRCC3-203ENST00000553332 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
XRCC3-203ENST00000553332 RAPGEF6Q8TEU7 1601 aa23.53■■□□□ 1.36
XRCC3-203ENST00000553332 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
XRCC3-203ENST00000553332 GLI2P10070 1586 aa23.5■■□□□ 1.35
XRCC3-203ENST00000553332 WDR7Q9Y4E6 1490 aa23.49■■□□□ 1.35
XRCC3-203ENST00000553332 ATP10BO94823 1461 aa23.46■■□□□ 1.35
XRCC3-203ENST00000553332 KCNH8Q96L42 1107 aa23.44■■□□□ 1.34
XRCC3-203ENST00000553332 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
XRCC3-203ENST00000553332 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
XRCC3-203ENST00000553332 MAP3K4Q9Y6R4 1608 aa23.42■■□□□ 1.34
XRCC3-203ENST00000553332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
XRCC3-203ENST00000553332 HNRNPUL2Q1KMD3 747 aaKnown RBP23.42■■□□□ 1.34
XRCC3-203ENST00000553332 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
XRCC3-203ENST00000553332 KDM6BO15054 1643 aa23.37■■□□□ 1.33
XRCC3-203ENST00000553332 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
XRCC3-203ENST00000553332 FMN1Q68DA7 1419 aa23.33■■□□□ 1.32
XRCC3-203ENST00000553332 ATP1B4Q9UN42 357 aaPredicted RBP23.32■■□□□ 1.32
XRCC3-203ENST00000553332 CD109Q6YHK3 1445 aa23.3■■□□□ 1.32
XRCC3-203ENST00000553332 TEX14Q8IWB6 1497 aa23.29■■□□□ 1.32
XRCC3-203ENST00000553332 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
XRCC3-203ENST00000553332 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
XRCC3-203ENST00000553332 CLIP1P30622 1438 aa23.25■■□□□ 1.31
XRCC3-203ENST00000553332 PLEKHD1A6NEE1 506 aa23.25■■□□□ 1.31
XRCC3-203ENST00000553332 ABCA9Q8IUA7 1624 aa23.24■■□□□ 1.31
XRCC3-203ENST00000553332 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
XRCC3-203ENST00000553332 LRRIQ1Q96JM4 1722 aa23.21■■□□□ 1.31
XRCC3-203ENST00000553332 COL17A1Q9UMD9 1497 aaPredicted RBP23.19■■□□□ 1.3
XRCC3-203ENST00000553332 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
XRCC3-203ENST00000553332 LOC105371045A0A1W2PR82 267 aa23.16■■□□□ 1.3
XRCC3-203ENST00000553332 CASKIN1Q8WXD9 1431 aa23.14■■□□□ 1.29
XRCC3-203ENST00000553332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.292e-6■■■■■ 51.7
XRCC3-203ENST00000553332 CEP162Q5TB80 1403 aa23.11■■□□□ 1.29
XRCC3-203ENST00000553332 CDK11AQ9UQ88 783 aaPredicted RBP23.11■■□□□ 1.29
XRCC3-203ENST00000553332 TTC37Q6PGP7 1564 aa23.1■■□□□ 1.29
XRCC3-203ENST00000553332 FYCO1Q9BQS8 1478 aa23.08■■□□□ 1.29
XRCC3-203ENST00000553332 CCDC18Q5T9S5 1454 aa23.06■■□□□ 1.28
XRCC3-203ENST00000553332 KIF14Q15058 1648 aa23.04■■□□□ 1.28
XRCC3-203ENST00000553332 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
XRCC3-203ENST00000553332 NEO1Q92859 1461 aa23.04■■□□□ 1.28
XRCC3-203ENST00000553332 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
XRCC3-203ENST00000553332 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
XRCC3-203ENST00000553332 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
XRCC3-203ENST00000553332 FANCAO15360 1455 aa22.99■■□□□ 1.27
XRCC3-203ENST00000553332 CFAP74Q9C0B2 1584 aa22.98■■□□□ 1.27
XRCC3-203ENST00000553332 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
XRCC3-203ENST00000553332 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
XRCC3-203ENST00000553332 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
XRCC3-203ENST00000553332 PLCH2O75038 1416 aa22.96■■□□□ 1.27
XRCC3-203ENST00000553332 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
XRCC3-203ENST00000553332 DENND4BO75064 1496 aaPredicted RBP22.9■■□□□ 1.26
XRCC3-203ENST00000553332 RICTORQ6R327 1708 aa22.89■■□□□ 1.26
XRCC3-203ENST00000553332 CDC42BPBQ9Y5S2 1711 aa22.88■■□□□ 1.25
XRCC3-203ENST00000553332 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
XRCC3-203ENST00000553332 KDM4FA0A1W2PPD8 638 aa22.88■■□□□ 1.25
XRCC3-203ENST00000553332 EFCAB2Q5VUJ9 269 aa22.88■■□□□ 1.25
XRCC3-203ENST00000553332 ADGRL1O94910 1474 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms