RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
ACTN1-207ENST00000553290 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
ACTN1-207ENST00000553290 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
ACTN1-207ENST00000553290 KIAA0586Q9BVV6 1533 aa22.18■■□□□ 1.14
ACTN1-207ENST00000553290 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
ACTN1-207ENST00000553290 IQGAP2Q13576 1575 aa21.99■■□□□ 1.11
ACTN1-207ENST00000553290 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
ACTN1-207ENST00000553290 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
ACTN1-207ENST00000553290 PTPRGP23470 1445 aa21.91■■□□□ 1.1
ACTN1-207ENST00000553290 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
ACTN1-207ENST00000553290 ADCY10Q96PN6 1610 aa21.9■■□□□ 1.1
ACTN1-207ENST00000553290 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
ACTN1-207ENST00000553290 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
ACTN1-207ENST00000553290 DISP1Q96F81 1524 aa21.85■■□□□ 1.09
ACTN1-207ENST00000553290 CTTNBP2Q8WZ74 1663 aa21.84■■□□□ 1.09
ACTN1-207ENST00000553290 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
ACTN1-207ENST00000553290 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
ACTN1-207ENST00000553290 KIF13AQ9H1H9 1805 aa21.81■■□□□ 1.08
ACTN1-207ENST00000553290 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
ACTN1-207ENST00000553290 ABCC10Q5T3U5 1492 aa21.78■■□□□ 1.08
ACTN1-207ENST00000553290 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
ACTN1-207ENST00000553290 EEA1Q15075 1411 aa21.78■■□□□ 1.08
ACTN1-207ENST00000553290 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
ACTN1-207ENST00000553290 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
ACTN1-207ENST00000553290 UACAQ9BZF9 1416 aa21.75■■□□□ 1.07
ACTN1-207ENST00000553290 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
ACTN1-207ENST00000553290 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
ACTN1-207ENST00000553290 DIP2BQ9P265 1576 aa21.72■■□□□ 1.07
ACTN1-207ENST00000553290 PLB1Q6P1J6 1458 aa21.65■■□□□ 1.06
ACTN1-207ENST00000553290 KDM5BQ9UGL1 1544 aa21.65■■□□□ 1.06
ACTN1-207ENST00000553290 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
ACTN1-207ENST00000553290 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
ACTN1-207ENST00000553290 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
ACTN1-207ENST00000553290 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.05
ACTN1-207ENST00000553290 ABCA8O94911 1581 aa21.57■■□□□ 1.04
ACTN1-207ENST00000553290 GLI2P10070 1586 aa21.57■■□□□ 1.04
ACTN1-207ENST00000553290 KIF21BO75037 1637 aa21.55■■□□□ 1.04
ACTN1-207ENST00000553290 TSPOAP1O95153 1857 aa21.55■■□□□ 1.04
ACTN1-207ENST00000553290 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
ACTN1-207ENST00000553290 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
ACTN1-207ENST00000553290 EPRSP07814 1512 aaKnown RBP21.51■■□□□ 1.03
ACTN1-207ENST00000553290 WDR7Q9Y4E6 1490 aa21.48■■□□□ 1.03
ACTN1-207ENST00000553290 KDM6BO15054 1643 aa21.47■■□□□ 1.03
ACTN1-207ENST00000553290 MAP3K4Q9Y6R4 1608 aa21.44■■□□□ 1.02
ACTN1-207ENST00000553290 PPRC1Q5VV67 1664 aaKnown RBP21.44■■□□□ 1.02
ACTN1-207ENST00000553290 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
ACTN1-207ENST00000553290 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
ACTN1-207ENST00000553290 EFCAB5A4FU69 1503 aa21.39■■□□□ 1.02
ACTN1-207ENST00000553290 ATP10BO94823 1461 aa21.39■■□□□ 1.02
ACTN1-207ENST00000553290 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
ACTN1-207ENST00000553290 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
ACTN1-207ENST00000553290 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
ACTN1-207ENST00000553290 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
ACTN1-207ENST00000553290 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
ACTN1-207ENST00000553290 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
ACTN1-207ENST00000553290 CFAP43Q8NDM7 1665 aa21.34■■□□□ 1.01
ACTN1-207ENST00000553290 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
ACTN1-207ENST00000553290 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
ACTN1-207ENST00000553290 NUP153P49790 1475 aaKnown RBP21.32■■□□□ 1
ACTN1-207ENST00000553290 MAGI3Q5TCQ9 1506 aa21.3■■□□□ 1
ACTN1-207ENST00000553290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
ACTN1-207ENST00000553290 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
ACTN1-207ENST00000553290 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
ACTN1-207ENST00000553290 ABCA9Q8IUA7 1624 aa21.23■□□□□ 0.99
ACTN1-207ENST00000553290 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
ACTN1-207ENST00000553290 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
ACTN1-207ENST00000553290 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
ACTN1-207ENST00000553290 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
ACTN1-207ENST00000553290 HECW1Q76N89 1606 aa21.14■□□□□ 0.97
ACTN1-207ENST00000553290 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.97
ACTN1-207ENST00000553290 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
ACTN1-207ENST00000553290 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
ACTN1-207ENST00000553290 NEO1Q92859 1461 aa21.1■□□□□ 0.97
ACTN1-207ENST00000553290 KDM4FA0A1W2PPD8 638 aa21.1■□□□□ 0.97
ACTN1-207ENST00000553290 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
ACTN1-207ENST00000553290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.06■□□□□ 0.96
ACTN1-207ENST00000553290 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.95
ACTN1-207ENST00000553290 ADGRL1O94910 1474 aa21.01■□□□□ 0.95
ACTN1-207ENST00000553290 CLIP1P30622 1438 aa21.01■□□□□ 0.95
ACTN1-207ENST00000553290 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
ACTN1-207ENST00000553290 CFAP74Q9C0B2 1584 aa21.01■□□□□ 0.95
ACTN1-207ENST00000553290 FANCAO15360 1455 aa21■□□□□ 0.95
ACTN1-207ENST00000553290 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
ACTN1-207ENST00000553290 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
ACTN1-207ENST00000553290 LRRIQ1Q96JM4 1722 aa20.98■□□□□ 0.95
ACTN1-207ENST00000553290 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
ACTN1-207ENST00000553290 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
ACTN1-207ENST00000553290 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
ACTN1-207ENST00000553290 PLCH2O75038 1416 aa20.95■□□□□ 0.95
ACTN1-207ENST00000553290 KIF14Q15058 1648 aa20.95■□□□□ 0.94
ACTN1-207ENST00000553290 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
ACTN1-207ENST00000553290 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
ACTN1-207ENST00000553290 FRMPD1Q5SYB0 1578 aa20.93■□□□□ 0.94
ACTN1-207ENST00000553290 MYO5CQ9NQX4 1742 aa20.92■□□□□ 0.94
ACTN1-207ENST00000553290 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
ACTN1-207ENST00000553290 EFCAB2Q5VUJ9 269 aa20.89■□□□□ 0.93
ACTN1-207ENST00000553290 SCAPERQ9BY12 1400 aa20.85■□□□□ 0.93
ACTN1-207ENST00000553290 ZMYM4Q5VZL5 1548 aa20.84■□□□□ 0.93
ACTN1-207ENST00000553290 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
ACTN1-207ENST00000553290 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms