RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
CALCOCO1-222ENST00000553154 EEA1Q15075 1411 aa17.15■□□□□ 0.34
CALCOCO1-222ENST00000553154 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
CALCOCO1-222ENST00000553154 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
CALCOCO1-222ENST00000553154 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO1-222ENST00000553154 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
CALCOCO1-222ENST00000553154 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
CALCOCO1-222ENST00000553154 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
CALCOCO1-222ENST00000553154 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
CALCOCO1-222ENST00000553154 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
CALCOCO1-222ENST00000553154 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
CALCOCO1-222ENST00000553154 KIF21BO75037 1637 aa17■□□□□ 0.31
CALCOCO1-222ENST00000553154 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
CALCOCO1-222ENST00000553154 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
CALCOCO1-222ENST00000553154 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
CALCOCO1-222ENST00000553154 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
CALCOCO1-222ENST00000553154 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-222ENST00000553154 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
CALCOCO1-222ENST00000553154 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
CALCOCO1-222ENST00000553154 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
CALCOCO1-222ENST00000553154 SAMD9Q5K651 1589 aa16.85■□□□□ 0.29
CALCOCO1-222ENST00000553154 ADCY10Q96PN6 1610 aa16.84■□□□□ 0.29
CALCOCO1-222ENST00000553154 PTPRGP23470 1445 aa16.82■□□□□ 0.28
CALCOCO1-222ENST00000553154 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
CALCOCO1-222ENST00000553154 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
CALCOCO1-222ENST00000553154 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
CALCOCO1-222ENST00000553154 ABCA8O94911 1581 aa16.75■□□□□ 0.27
CALCOCO1-222ENST00000553154 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
CALCOCO1-222ENST00000553154 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
CALCOCO1-222ENST00000553154 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
CALCOCO1-222ENST00000553154 KDM5BQ9UGL1 1544 aa16.71■□□□□ 0.27
CALCOCO1-222ENST00000553154 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
CALCOCO1-222ENST00000553154 FHOD3Q2V2M9 1422 aa16.67■□□□□ 0.26
CALCOCO1-222ENST00000553154 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
CALCOCO1-222ENST00000553154 ZCCHC11Q5TAX3 1644 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-222ENST00000553154 ABCC10Q5T3U5 1492 aa16.62■□□□□ 0.25
CALCOCO1-222ENST00000553154 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
CALCOCO1-222ENST00000553154 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-222ENST00000553154 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
CALCOCO1-222ENST00000553154 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
CALCOCO1-222ENST00000553154 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-222ENST00000553154 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
CALCOCO1-222ENST00000553154 ASXL2Q76L83 1435 aa16.59■□□□□ 0.25
CALCOCO1-222ENST00000553154 KIF13AQ9H1H9 1805 aa16.58■□□□□ 0.24
CALCOCO1-222ENST00000553154 ATP10BO94823 1461 aa16.57■□□□□ 0.24
CALCOCO1-222ENST00000553154 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
CALCOCO1-222ENST00000553154 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-222ENST00000553154 GLI2P10070 1586 aa16.55■□□□□ 0.24
CALCOCO1-222ENST00000553154 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
CALCOCO1-222ENST00000553154 WDR7Q9Y4E6 1490 aa16.54■□□□□ 0.24
CALCOCO1-222ENST00000553154 CLIP1P30622 1438 aa16.53■□□□□ 0.24
CALCOCO1-222ENST00000553154 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
CALCOCO1-222ENST00000553154 EPRSP07814 1512 aaKnown RBP16.52■□□□□ 0.24
CALCOCO1-222ENST00000553154 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
CALCOCO1-222ENST00000553154 PCF11O94913 1555 aaKnown RBP16.47■□□□□ 0.23
CALCOCO1-222ENST00000553154 HECW1Q76N89 1606 aa16.46■□□□□ 0.23
CALCOCO1-222ENST00000553154 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
CALCOCO1-222ENST00000553154 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
CALCOCO1-222ENST00000553154 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
CALCOCO1-222ENST00000553154 FAM69CQ0P6D2 419 aa16.45■□□□□ 0.22
CALCOCO1-222ENST00000553154 PPRC1Q5VV67 1664 aaKnown RBP16.45■□□□□ 0.22
CALCOCO1-222ENST00000553154 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
CALCOCO1-222ENST00000553154 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
CALCOCO1-222ENST00000553154 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
CALCOCO1-222ENST00000553154 ARID3CA6NKF2 412 aa16.41■□□□□ 0.22
CALCOCO1-222ENST00000553154 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
CALCOCO1-222ENST00000553154 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
CALCOCO1-222ENST00000553154 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
CALCOCO1-222ENST00000553154 CCDC18Q5T9S5 1454 aa16.35■□□□□ 0.21
CALCOCO1-222ENST00000553154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.33■□□□□ 0.2
CALCOCO1-222ENST00000553154 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
CALCOCO1-222ENST00000553154 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
CALCOCO1-222ENST00000553154 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
CALCOCO1-222ENST00000553154 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
CALCOCO1-222ENST00000553154 TEX14Q8IWB6 1497 aa16.3■□□□□ 0.2
CALCOCO1-222ENST00000553154 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO1-222ENST00000553154 PLEKHD1A6NEE1 506 aa16.29■□□□□ 0.2
CALCOCO1-222ENST00000553154 KCNH8Q96L42 1107 aa16.29■□□□□ 0.2
CALCOCO1-222ENST00000553154 KIF14Q15058 1648 aa16.28■□□□□ 0.2
CALCOCO1-222ENST00000553154 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
CALCOCO1-222ENST00000553154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
CALCOCO1-222ENST00000553154 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
CALCOCO1-222ENST00000553154 KDM6BO15054 1643 aa16.25■□□□□ 0.19
CALCOCO1-222ENST00000553154 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
CALCOCO1-222ENST00000553154 NEO1Q92859 1461 aa16.23■□□□□ 0.19
CALCOCO1-222ENST00000553154 KDM4FA0A1W2PPD8 638 aa16.23■□□□□ 0.19
CALCOCO1-222ENST00000553154 ATP1B4Q9UN42 357 aaPredicted RBP16.22■□□□□ 0.19
CALCOCO1-222ENST00000553154 PLCH2O75038 1416 aa16.21■□□□□ 0.19
CALCOCO1-222ENST00000553154 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
CALCOCO1-222ENST00000553154 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.19
CALCOCO1-222ENST00000553154 TIAM1Q13009 1591 aa16.21■□□□□ 0.18
CALCOCO1-222ENST00000553154 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
CALCOCO1-222ENST00000553154 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
CALCOCO1-222ENST00000553154 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
CALCOCO1-222ENST00000553154 FANCAO15360 1455 aa16.17■□□□□ 0.18
CALCOCO1-222ENST00000553154 PREX2Q70Z35 1606 aa16.16■□□□□ 0.18
CALCOCO1-222ENST00000553154 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
CALCOCO1-222ENST00000553154 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
CALCOCO1-222ENST00000553154 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
CALCOCO1-222ENST00000553154 LRRC9Q6ZRR7 1453 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms