RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
PPFIA2-227ENST00000552948 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
PPFIA2-227ENST00000552948 PPP1R15AO75807 674 aaPredicted RBP16.03■□□□□ 0.16
PPFIA2-227ENST00000552948 NBR1Q14596 966 aa16.02■□□□□ 0.16
PPFIA2-227ENST00000552948 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
PPFIA2-227ENST00000552948 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
PPFIA2-227ENST00000552948 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
PPFIA2-227ENST00000552948 CHIC2Q9UKJ5 165 aa15.98■□□□□ 0.15
PPFIA2-227ENST00000552948 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.15
PPFIA2-227ENST00000552948 MSH5O43196 834 aa15.95■□□□□ 0.14
PPFIA2-227ENST00000552948 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
PPFIA2-227ENST00000552948 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
PPFIA2-227ENST00000552948 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
PPFIA2-227ENST00000552948 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
PPFIA2-227ENST00000552948 TIMELESSQ9UNS1 1208 aa15.91■□□□□ 0.14
PPFIA2-227ENST00000552948 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
PPFIA2-227ENST00000552948 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
PPFIA2-227ENST00000552948 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
PPFIA2-227ENST00000552948 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
PPFIA2-227ENST00000552948 ZNF326Q5BKZ1 582 aaKnown RBP15.88■□□□□ 0.13
PPFIA2-227ENST00000552948 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
PPFIA2-227ENST00000552948 CUX2O14529 1486 aa15.88■□□□□ 0.13
PPFIA2-227ENST00000552948 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
PPFIA2-227ENST00000552948 EIF4G2P78344 907 aaKnown RBP eCLIP15.86■□□□□ 0.13
PPFIA2-227ENST00000552948 DEKP35659 375 aaKnown RBP15.86■□□□□ 0.13
PPFIA2-227ENST00000552948 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
PPFIA2-227ENST00000552948 HSPA5P11021 654 aaKnown RBP15.85■□□□□ 0.13
PPFIA2-227ENST00000552948 NPM2Q86SE8 214 aaKnown RBP15.85■□□□□ 0.13
PPFIA2-227ENST00000552948 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
PPFIA2-227ENST00000552948 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
PPFIA2-227ENST00000552948 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
PPFIA2-227ENST00000552948 MAPKBP1O60336 1514 aa15.81■□□□□ 0.12
PPFIA2-227ENST00000552948 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
PPFIA2-227ENST00000552948 FOXD1Q16676 465 aa15.79■□□□□ 0.12
PPFIA2-227ENST00000552948 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
PPFIA2-227ENST00000552948 NOP58Q9Y2X3 529 aaKnown RBP15.78■□□□□ 0.12
PPFIA2-227ENST00000552948 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
PPFIA2-227ENST00000552948 CCDC184Q52MB2 194 aa15.77■□□□□ 0.12
PPFIA2-227ENST00000552948 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.12
PPFIA2-227ENST00000552948 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
PPFIA2-227ENST00000552948 IGF1RP08069 1367 aa15.76■□□□□ 0.11
PPFIA2-227ENST00000552948 LRRC9Q6ZRR7 1453 aa15.76■□□□□ 0.11
PPFIA2-227ENST00000552948 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
PPFIA2-227ENST00000552948 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
PPFIA2-227ENST00000552948 WASHC2AQ641Q2 1341 aa15.71■□□□□ 0.11
PPFIA2-227ENST00000552948 CUX1P39880 1505 aa15.7■□□□□ 0.1
PPFIA2-227ENST00000552948 L3MBTL2Q969R5 705 aa15.68■□□□□ 0.1
PPFIA2-227ENST00000552948 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
PPFIA2-227ENST00000552948 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
PPFIA2-227ENST00000552948 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
PPFIA2-227ENST00000552948 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
PPFIA2-227ENST00000552948 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
PPFIA2-227ENST00000552948 ERICH6BQ5W0A0 696 aa15.67■□□□□ 0.1
PPFIA2-227ENST00000552948 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
PPFIA2-227ENST00000552948 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
PPFIA2-227ENST00000552948 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
PPFIA2-227ENST00000552948 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
PPFIA2-227ENST00000552948 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
PPFIA2-227ENST00000552948 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
PPFIA2-227ENST00000552948 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
PPFIA2-227ENST00000552948 MPHOSPH9Q99550 1183 aa15.61■□□□□ 0.09
PPFIA2-227ENST00000552948 FGD6Q6ZV73 1430 aa15.59■□□□□ 0.09
PPFIA2-227ENST00000552948 C11orf95C9JLR9 678 aaPredicted RBP15.59■□□□□ 0.09
PPFIA2-227ENST00000552948 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.09
PPFIA2-227ENST00000552948 UACAQ9BZF9 1416 aa15.58■□□□□ 0.09
PPFIA2-227ENST00000552948 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.09
PPFIA2-227ENST00000552948 FMN1Q68DA7 1419 aa15.58■□□□□ 0.08
PPFIA2-227ENST00000552948 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
PPFIA2-227ENST00000552948 KDM2AQ9Y2K7 1162 aa15.55■□□□□ 0.08
PPFIA2-227ENST00000552948 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
PPFIA2-227ENST00000552948 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
PPFIA2-227ENST00000552948 NEFMP07197 916 aa15.53■□□□□ 0.08
PPFIA2-227ENST00000552948 NUDCQ9Y266 331 aa15.53■□□□□ 0.08
PPFIA2-227ENST00000552948 CCDC7Q96M83 1385 aa15.52■□□□□ 0.08
PPFIA2-227ENST00000552948 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.07
PPFIA2-227ENST00000552948 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
PPFIA2-227ENST00000552948 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
PPFIA2-227ENST00000552948 CFTRP13569 1480 aa15.49■□□□□ 0.07
PPFIA2-227ENST00000552948 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
PPFIA2-227ENST00000552948 PCF11O94913 1555 aaKnown RBP15.49■□□□□ 0.07
PPFIA2-227ENST00000552948 PTPRKQ15262 1439 aa15.49■□□□□ 0.07
PPFIA2-227ENST00000552948 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
PPFIA2-227ENST00000552948 HFM1A2PYH4 1435 aa15.48■□□□□ 0.07
PPFIA2-227ENST00000552948 NAIPQ13075 1403 aa15.47■□□□□ 0.07
PPFIA2-227ENST00000552948 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
PPFIA2-227ENST00000552948 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
PPFIA2-227ENST00000552948 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
PPFIA2-227ENST00000552948 CASKIN1Q8WXD9 1431 aa15.46■□□□□ 0.07
PPFIA2-227ENST00000552948 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.07
PPFIA2-227ENST00000552948 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
PPFIA2-227ENST00000552948 EIF5BO60841 1220 aaKnown RBP15.45■□□□□ 0.06
PPFIA2-227ENST00000552948 ANO8Q9HCE9 1232 aaPredicted RBP15.45■□□□□ 0.06
PPFIA2-227ENST00000552948 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
PPFIA2-227ENST00000552948 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
PPFIA2-227ENST00000552948 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
PPFIA2-227ENST00000552948 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
PPFIA2-227ENST00000552948 IL27Q8NEV9 243 aa15.43■□□□□ 0.06
PPFIA2-227ENST00000552948 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
PPFIA2-227ENST00000552948 FYCO1Q9BQS8 1478 aa15.42■□□□□ 0.06
PPFIA2-227ENST00000552948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms