RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
TMEM116-215ENST00000552374 KIAA0586Q9BVV6 1533 aa18.47■□□□□ 0.55
TMEM116-215ENST00000552374 CUL7Q14999 1698 aa18.46■□□□□ 0.55
TMEM116-215ENST00000552374 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
TMEM116-215ENST00000552374 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
TMEM116-215ENST00000552374 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
TMEM116-215ENST00000552374 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
TMEM116-215ENST00000552374 PTPRGP23470 1445 aa18.32■□□□□ 0.52
TMEM116-215ENST00000552374 CARMIL2Q6F5E8 1435 aa18.32■□□□□ 0.52
TMEM116-215ENST00000552374 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
TMEM116-215ENST00000552374 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
TMEM116-215ENST00000552374 TNIKQ9UKE5 1360 aa18.29■□□□□ 0.52
TMEM116-215ENST00000552374 IQGAP2Q13576 1575 aa18.26■□□□□ 0.51
TMEM116-215ENST00000552374 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
TMEM116-215ENST00000552374 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
TMEM116-215ENST00000552374 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
TMEM116-215ENST00000552374 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
TMEM116-215ENST00000552374 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
TMEM116-215ENST00000552374 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
TMEM116-215ENST00000552374 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
TMEM116-215ENST00000552374 EEA1Q15075 1411 aa18.16■□□□□ 0.5
TMEM116-215ENST00000552374 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
TMEM116-215ENST00000552374 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
TMEM116-215ENST00000552374 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
TMEM116-215ENST00000552374 ABCC10Q5T3U5 1492 aa18.11■□□□□ 0.49
TMEM116-215ENST00000552374 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
TMEM116-215ENST00000552374 ABCC2Q92887 1545 aa18.1■□□□□ 0.49
TMEM116-215ENST00000552374 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
TMEM116-215ENST00000552374 KIAA0556O60303 1618 aa18.08■□□□□ 0.48
TMEM116-215ENST00000552374 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
TMEM116-215ENST00000552374 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
TMEM116-215ENST00000552374 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
TMEM116-215ENST00000552374 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
TMEM116-215ENST00000552374 PLB1Q6P1J6 1458 aa18.04■□□□□ 0.48
TMEM116-215ENST00000552374 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
TMEM116-215ENST00000552374 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
TMEM116-215ENST00000552374 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
TMEM116-215ENST00000552374 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
TMEM116-215ENST00000552374 KIF13AQ9H1H9 1805 aa17.98■□□□□ 0.47
TMEM116-215ENST00000552374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
TMEM116-215ENST00000552374 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
TMEM116-215ENST00000552374 ABCA8O94911 1581 aa17.92■□□□□ 0.46
TMEM116-215ENST00000552374 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
TMEM116-215ENST00000552374 KIF21BO75037 1637 aa17.9■□□□□ 0.46
TMEM116-215ENST00000552374 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
TMEM116-215ENST00000552374 ZCCHC11Q5TAX3 1644 aaKnown RBP17.89■□□□□ 0.46
TMEM116-215ENST00000552374 ATP10BO94823 1461 aa17.87■□□□□ 0.45
TMEM116-215ENST00000552374 WDR7Q9Y4E6 1490 aa17.87■□□□□ 0.45
TMEM116-215ENST00000552374 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
TMEM116-215ENST00000552374 SAMD9Q5K651 1589 aa17.86■□□□□ 0.45
TMEM116-215ENST00000552374 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
TMEM116-215ENST00000552374 GLI2P10070 1586 aa17.85■□□□□ 0.45
TMEM116-215ENST00000552374 ATP1B4Q9UN42 357 aaPredicted RBP17.85■□□□□ 0.45
TMEM116-215ENST00000552374 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
TMEM116-215ENST00000552374 KDM6BO15054 1643 aa17.79■□□□□ 0.44
TMEM116-215ENST00000552374 PLEKHD1A6NEE1 506 aa17.79■□□□□ 0.44
TMEM116-215ENST00000552374 EFCAB5A4FU69 1503 aa17.77■□□□□ 0.44
TMEM116-215ENST00000552374 RAPGEF6Q8TEU7 1601 aa17.77■□□□□ 0.43
TMEM116-215ENST00000552374 NUP153P49790 1475 aaKnown RBP17.77■□□□□ 0.43
TMEM116-215ENST00000552374 TEX14Q8IWB6 1497 aa17.77■□□□□ 0.43
TMEM116-215ENST00000552374 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
TMEM116-215ENST00000552374 MAP3K4Q9Y6R4 1608 aa17.73■□□□□ 0.43
TMEM116-215ENST00000552374 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
TMEM116-215ENST00000552374 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
TMEM116-215ENST00000552374 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
TMEM116-215ENST00000552374 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
TMEM116-215ENST00000552374 CDK11AQ9UQ88 783 aaPredicted RBP17.66■□□□□ 0.42
TMEM116-215ENST00000552374 KDM4FA0A1W2PPD8 638 aa17.64■□□□□ 0.42
TMEM116-215ENST00000552374 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
TMEM116-215ENST00000552374 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
TMEM116-215ENST00000552374 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
TMEM116-215ENST00000552374 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
TMEM116-215ENST00000552374 CLIP1P30622 1438 aa17.6■□□□□ 0.41
TMEM116-215ENST00000552374 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
TMEM116-215ENST00000552374 ABCA9Q8IUA7 1624 aa17.59■□□□□ 0.41
TMEM116-215ENST00000552374 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
TMEM116-215ENST00000552374 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
TMEM116-215ENST00000552374 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
TMEM116-215ENST00000552374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
TMEM116-215ENST00000552374 NEO1Q92859 1461 aa17.53■□□□□ 0.4
TMEM116-215ENST00000552374 AKNAQ7Z591 1439 aa17.52■□□□□ 0.39
TMEM116-215ENST00000552374 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
TMEM116-215ENST00000552374 FANCAO15360 1455 aa17.5■□□□□ 0.39
TMEM116-215ENST00000552374 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
TMEM116-215ENST00000552374 PLCH2O75038 1416 aa17.49■□□□□ 0.39
TMEM116-215ENST00000552374 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
TMEM116-215ENST00000552374 ADGRL1O94910 1474 aa17.46■□□□□ 0.39
TMEM116-215ENST00000552374 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.38
TMEM116-215ENST00000552374 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
TMEM116-215ENST00000552374 ARID4BQ4LE39 1312 aaPredicted RBP17.45■□□□□ 0.38
TMEM116-215ENST00000552374 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
TMEM116-215ENST00000552374 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
TMEM116-215ENST00000552374 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
TMEM116-215ENST00000552374 FYCO1Q9BQS8 1478 aa17.43■□□□□ 0.38
TMEM116-215ENST00000552374 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
TMEM116-215ENST00000552374 KIF14Q15058 1648 aa17.4■□□□□ 0.38
TMEM116-215ENST00000552374 AFAP1Q8N556 730 aa17.39■□□□□ 0.38
TMEM116-215ENST00000552374 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
TMEM116-215ENST00000552374 LRRIQ1Q96JM4 1722 aa17.37■□□□□ 0.37
TMEM116-215ENST00000552374 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms