RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
TMEM106C-218ENST00000552187 DIP2BQ9P265 1576 aa15.23■□□□□ 0.03
TMEM106C-218ENST00000552187 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
TMEM106C-218ENST00000552187 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
TMEM106C-218ENST00000552187 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
TMEM106C-218ENST00000552187 NUP160Q12769 1436 aa15.18■□□□□ 0.02
TMEM106C-218ENST00000552187 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
TMEM106C-218ENST00000552187 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
TMEM106C-218ENST00000552187 TSPOAP1O95153 1857 aa15.17■□□□□ 0.02
TMEM106C-218ENST00000552187 CUX1P39880 1505 aa15.16■□□□□ 0.02
TMEM106C-218ENST00000552187 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
TMEM106C-218ENST00000552187 ABCA5Q8WWZ7 1642 aa15.11■□□□□ 0.01
TMEM106C-218ENST00000552187 ADAMTS12P58397 1594 aa15.08■□□□□ 0
TMEM106C-218ENST00000552187 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
TMEM106C-218ENST00000552187 SOCS7O14512 581 aa15.07■□□□□ 0
TMEM106C-218ENST00000552187 MSH5O43196 834 aa15.06■□□□□ 0
TMEM106C-218ENST00000552187 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
TMEM106C-218ENST00000552187 ILDR2Q71H61 639 aa15.04■□□□□ -0
TMEM106C-218ENST00000552187 JPH4Q96JJ6 628 aa15.04■□□□□ -0
TMEM106C-218ENST00000552187 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
TMEM106C-218ENST00000552187 COL17A1Q9UMD9 1497 aaPredicted RBP14.96□□□□□ -0.01
TMEM106C-218ENST00000552187 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.02
TMEM106C-218ENST00000552187 PPRC1Q5VV67 1664 aaKnown RBP14.95□□□□□ -0.02
TMEM106C-218ENST00000552187 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
TMEM106C-218ENST00000552187 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
TMEM106C-218ENST00000552187 GLI2P10070 1586 aa14.86□□□□□ -0.03
TMEM106C-218ENST00000552187 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
TMEM106C-218ENST00000552187 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
TMEM106C-218ENST00000552187 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
TMEM106C-218ENST00000552187 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.03
TMEM106C-218ENST00000552187 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
TMEM106C-218ENST00000552187 TEX14Q8IWB6 1497 aa14.8□□□□□ -0.04
TMEM106C-218ENST00000552187 ABCC2Q92887 1545 aa14.8□□□□□ -0.04
TMEM106C-218ENST00000552187 PTPRGP23470 1445 aa14.78□□□□□ -0.04
TMEM106C-218ENST00000552187 MAP3K4Q9Y6R4 1608 aa14.75□□□□□ -0.05
TMEM106C-218ENST00000552187 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
TMEM106C-218ENST00000552187 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
TMEM106C-218ENST00000552187 PTPRMP28827 1452 aa14.72□□□□□ -0.05
TMEM106C-218ENST00000552187 KIF21BO75037 1637 aa14.72□□□□□ -0.05
TMEM106C-218ENST00000552187 PCF11O94913 1555 aaKnown RBP14.72□□□□□ -0.05
TMEM106C-218ENST00000552187 SPATA31D1Q6ZQQ2 1576 aa14.72□□□□□ -0.05
TMEM106C-218ENST00000552187 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
TMEM106C-218ENST00000552187 CUL7Q14999 1698 aa14.71□□□□□ -0.06
TMEM106C-218ENST00000552187 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
TMEM106C-218ENST00000552187 UHRF1BP1LA0JNW5 1464 aa14.65□□□□□ -0.06
TMEM106C-218ENST00000552187 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
TMEM106C-218ENST00000552187 HSPA2P54652 639 aa14.64□□□□□ -0.07
TMEM106C-218ENST00000552187 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
TMEM106C-218ENST00000552187 ADAMTSL3P82987 1691 aa14.62□□□□□ -0.07
TMEM106C-218ENST00000552187 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
TMEM106C-218ENST00000552187 KDM5BQ9UGL1 1544 aa14.6□□□□□ -0.07
TMEM106C-218ENST00000552187 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
TMEM106C-218ENST00000552187 MAGI3Q5TCQ9 1506 aa14.57□□□□□ -0.08
TMEM106C-218ENST00000552187 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
TMEM106C-218ENST00000552187 WDR7Q9Y4E6 1490 aa14.56□□□□□ -0.08
TMEM106C-218ENST00000552187 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
TMEM106C-218ENST00000552187 ARID4BQ4LE39 1312 aaPredicted RBP14.52□□□□□ -0.08
TMEM106C-218ENST00000552187 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
TMEM106C-218ENST00000552187 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
TMEM106C-218ENST00000552187 BCORL1Q5H9F3 1711 aa14.49□□□□□ -0.09
TMEM106C-218ENST00000552187 CFAP43Q8NDM7 1665 aa14.49□□□□□ -0.09
TMEM106C-218ENST00000552187 IGF1RP08069 1367 aa14.48□□□□□ -0.09
TMEM106C-218ENST00000552187 ARAP3Q8WWN8 1544 aa14.47□□□□□ -0.09
TMEM106C-218ENST00000552187 DISP1Q96F81 1524 aa14.46□□□□□ -0.09
TMEM106C-218ENST00000552187 RIMS1Q86UR5 1692 aaKnown RBP14.46□□□□□ -0.09
TMEM106C-218ENST00000552187 IQGAP2Q13576 1575 aa14.44□□□□□ -0.1
TMEM106C-218ENST00000552187 RAPGEF3O95398 923 aa14.42□□□□□ -0.1
TMEM106C-218ENST00000552187 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
TMEM106C-218ENST00000552187 CARMIL1Q5VZK9 1371 aa14.38□□□□□ -0.11
TMEM106C-218ENST00000552187 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
TMEM106C-218ENST00000552187 YEATS2Q9ULM3 1422 aa14.34□□□□□ -0.11
TMEM106C-218ENST00000552187 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
TMEM106C-218ENST00000552187 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
TMEM106C-218ENST00000552187 KIAA0556O60303 1618 aa14.33□□□□□ -0.11
TMEM106C-218ENST00000552187 UGGT2Q9NYU1 1516 aa14.32□□□□□ -0.12
TMEM106C-218ENST00000552187 FRMPD1Q5SYB0 1578 aa14.32□□□□□ -0.12
TMEM106C-218ENST00000552187 ARHGEF40Q8TER5 1519 aa14.3□□□□□ -0.12
TMEM106C-218ENST00000552187 POGZQ7Z3K3 1410 aa14.29□□□□□ -0.12
TMEM106C-218ENST00000552187 MLECQ14165 292 aa14.28□□□□□ -0.12
TMEM106C-218ENST00000552187 STRCQ7RTU9 1775 aa14.28□□□□□ -0.12
TMEM106C-218ENST00000552187 FANCAO15360 1455 aa14.26□□□□□ -0.13
TMEM106C-218ENST00000552187 NEO1Q92859 1461 aa14.26□□□□□ -0.13
TMEM106C-218ENST00000552187 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
TMEM106C-218ENST00000552187 ABCA8O94911 1581 aa14.26□□□□□ -0.13
TMEM106C-218ENST00000552187 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
TMEM106C-218ENST00000552187 LTBP4Q8N2S1 1624 aa14.24□□□□□ -0.13
TMEM106C-218ENST00000552187 TTC37Q6PGP7 1564 aa14.24□□□□□ -0.13
TMEM106C-218ENST00000552187 PREX1Q8TCU6 1659 aa14.23□□□□□ -0.13
TMEM106C-218ENST00000552187 PTPRTO14522 1441 aa14.23□□□□□ -0.13
TMEM106C-218ENST00000552187 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
TMEM106C-218ENST00000552187 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
TMEM106C-218ENST00000552187 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
TMEM106C-218ENST00000552187 UBAP1LF5GYI3 381 aa14.21□□□□□ -0.13
TMEM106C-218ENST00000552187 KCNA4P22459 653 aa14.21□□□□□ -0.13
TMEM106C-218ENST00000552187 CEBPAP49715 358 aaPredicted RBP14.21□□□□□ -0.13
TMEM106C-218ENST00000552187 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
TMEM106C-218ENST00000552187 MED1Q15648 1581 aaPredicted RBP14.2□□□□□ -0.14
TMEM106C-218ENST00000552187 SIGLEC1Q9BZZ2 1709 aa14.2□□□□□ -0.14
TMEM106C-218ENST00000552187 DENND4BO75064 1496 aaPredicted RBP14.19□□□□□ -0.14
TMEM106C-218ENST00000552187 UHRF1BP1Q6BDS2 1440 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms