RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 SHROOM2Q13796 1616 aa13.02□□□□□ -0.32
ERBB3-218ENST00000551176 CUL7Q14999 1698 aa13.02□□□□□ -0.32
ERBB3-218ENST00000551176 JPH4Q96JJ6 628 aa13.01□□□□□ -0.33
ERBB3-218ENST00000551176 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
ERBB3-218ENST00000551176 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
ERBB3-218ENST00000551176 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
ERBB3-218ENST00000551176 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
ERBB3-218ENST00000551176 IQGAP2Q13576 1575 aa12.87□□□□□ -0.35
ERBB3-218ENST00000551176 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
ERBB3-218ENST00000551176 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
ERBB3-218ENST00000551176 DISP1Q96F81 1524 aa12.84□□□□□ -0.35
ERBB3-218ENST00000551176 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
ERBB3-218ENST00000551176 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
ERBB3-218ENST00000551176 PTPRGP23470 1445 aa12.81□□□□□ -0.36
ERBB3-218ENST00000551176 CARMIL2Q6F5E8 1435 aa12.81□□□□□ -0.36
ERBB3-218ENST00000551176 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
ERBB3-218ENST00000551176 EEA1Q15075 1411 aa12.8□□□□□ -0.36
ERBB3-218ENST00000551176 TTBK1Q5TCY1 1321 aaPredicted RBP12.8□□□□□ -0.36
ERBB3-218ENST00000551176 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
ERBB3-218ENST00000551176 KIAA0556O60303 1618 aa12.76□□□□□ -0.37
ERBB3-218ENST00000551176 CTTNBP2Q8WZ74 1663 aa12.74□□□□□ -0.37
ERBB3-218ENST00000551176 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
ERBB3-218ENST00000551176 NPM1P06748 294 aaKnown RBP eCLIP12.72□□□□□ -0.37
ERBB3-218ENST00000551176 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
ERBB3-218ENST00000551176 UHRF1BP1LA0JNW5 1464 aa12.72□□□□□ -0.37
ERBB3-218ENST00000551176 ABCC2Q92887 1545 aa12.71□□□□□ -0.38
ERBB3-218ENST00000551176 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
ERBB3-218ENST00000551176 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-218ENST00000551176 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
ERBB3-218ENST00000551176 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-218ENST00000551176 PLB1Q6P1J6 1458 aa12.69□□□□□ -0.38
ERBB3-218ENST00000551176 KIF21BO75037 1637 aa12.69□□□□□ -0.38
ERBB3-218ENST00000551176 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
ERBB3-218ENST00000551176 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
ERBB3-218ENST00000551176 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
ERBB3-218ENST00000551176 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
ERBB3-218ENST00000551176 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
ERBB3-218ENST00000551176 SAMD9Q5K651 1589 aa12.65□□□□□ -0.38
ERBB3-218ENST00000551176 ASXL2Q76L83 1435 aa12.65□□□□□ -0.38
ERBB3-218ENST00000551176 ABCA8O94911 1581 aa12.64□□□□□ -0.39
ERBB3-218ENST00000551176 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
ERBB3-218ENST00000551176 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
ERBB3-218ENST00000551176 FHOD3Q2V2M9 1422 aa12.61□□□□□ -0.39
ERBB3-218ENST00000551176 ZCCHC11Q5TAX3 1644 aaKnown RBP12.6□□□□□ -0.39
ERBB3-218ENST00000551176 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
ERBB3-218ENST00000551176 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
ERBB3-218ENST00000551176 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
ERBB3-218ENST00000551176 ATP10BO94823 1461 aa12.56□□□□□ -0.4
ERBB3-218ENST00000551176 GLI2P10070 1586 aa12.56□□□□□ -0.4
ERBB3-218ENST00000551176 WDR7Q9Y4E6 1490 aa12.55□□□□□ -0.4
ERBB3-218ENST00000551176 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
ERBB3-218ENST00000551176 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
ERBB3-218ENST00000551176 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
ERBB3-218ENST00000551176 RAPGEF6Q8TEU7 1601 aa12.52□□□□□ -0.4
ERBB3-218ENST00000551176 KCNH8Q96L42 1107 aa12.5□□□□□ -0.41
ERBB3-218ENST00000551176 PPRC1Q5VV67 1664 aaKnown RBP12.49□□□□□ -0.41
ERBB3-218ENST00000551176 MAP3K4Q9Y6R4 1608 aa12.48□□□□□ -0.41
ERBB3-218ENST00000551176 TSPOAP1O95153 1857 aa12.46□□□□□ -0.41
ERBB3-218ENST00000551176 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.42
ERBB3-218ENST00000551176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
ERBB3-218ENST00000551176 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
ERBB3-218ENST00000551176 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
ERBB3-218ENST00000551176 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
ERBB3-218ENST00000551176 KDM6BO15054 1643 aa12.44□□□□□ -0.42
ERBB3-218ENST00000551176 CDK13Q14004 1512 aaKnown RBP12.43□□□□□ -0.42
ERBB3-218ENST00000551176 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
ERBB3-218ENST00000551176 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
ERBB3-218ENST00000551176 CLIP1P30622 1438 aa12.41□□□□□ -0.42
ERBB3-218ENST00000551176 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
ERBB3-218ENST00000551176 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
ERBB3-218ENST00000551176 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
ERBB3-218ENST00000551176 ABCA9Q8IUA7 1624 aa12.39□□□□□ -0.43
ERBB3-218ENST00000551176 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
ERBB3-218ENST00000551176 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
ERBB3-218ENST00000551176 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
ERBB3-218ENST00000551176 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
ERBB3-218ENST00000551176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERBB3-218ENST00000551176 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
ERBB3-218ENST00000551176 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
ERBB3-218ENST00000551176 LRRIQ1Q96JM4 1722 aa12.33□□□□□ -0.44
ERBB3-218ENST00000551176 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
ERBB3-218ENST00000551176 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
ERBB3-218ENST00000551176 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
ERBB3-218ENST00000551176 NEO1Q92859 1461 aa12.3□□□□□ -0.44
ERBB3-218ENST00000551176 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
ERBB3-218ENST00000551176 PHLDB1Q86UU1 1377 aa12.3□□□□□ -0.44
ERBB3-218ENST00000551176 KIF14Q15058 1648 aa12.29□□□□□ -0.44
ERBB3-218ENST00000551176 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
ERBB3-218ENST00000551176 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
ERBB3-218ENST00000551176 RAPGEF3O95398 923 aa12.29□□□□□ -0.44
ERBB3-218ENST00000551176 FANCAO15360 1455 aa12.28□□□□□ -0.44
ERBB3-218ENST00000551176 PLCH2O75038 1416 aa12.28□□□□□ -0.44
ERBB3-218ENST00000551176 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
ERBB3-218ENST00000551176 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
ERBB3-218ENST00000551176 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-218ENST00000551176 ADGRL1O94910 1474 aa12.21□□□□□ -0.45
ERBB3-218ENST00000551176 EFCAB2Q5VUJ9 269 aa12.21□□□□□ -0.45
ERBB3-218ENST00000551176 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
ERBB3-218ENST00000551176 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
ERBB3-218ENST00000551176 ARHGAP5Q13017 1502 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms