RNA–Protein interactions for RNA: ENST00000551174.1

LINC02401-202, Transcript of long intergenic non-protein coding RNA 2401, humanhuman

TSL 5

Gene LINC02401, Length 713 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02401-202ENST00000551174 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
LINC02401-202ENST00000551174 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
LINC02401-202ENST00000551174 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
LINC02401-202ENST00000551174 MROH2BQ7Z745 1585 aa12.28□□□□□ -0.44
LINC02401-202ENST00000551174 FBLN2P98095 1184 aa12.28□□□□□ -0.44
LINC02401-202ENST00000551174 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
LINC02401-202ENST00000551174 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
LINC02401-202ENST00000551174 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
LINC02401-202ENST00000551174 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
LINC02401-202ENST00000551174 ATAD2BQ9ULI0 1458 aa12.22□□□□□ -0.45
LINC02401-202ENST00000551174 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
LINC02401-202ENST00000551174 BAZ1AQ9NRL2 1556 aaPredicted RBP12.21□□□□□ -0.46
LINC02401-202ENST00000551174 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
LINC02401-202ENST00000551174 WIZO95785 1651 aa12.16□□□□□ -0.46
LINC02401-202ENST00000551174 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
LINC02401-202ENST00000551174 C7P10643 843 aa12.14□□□□□ -0.47
LINC02401-202ENST00000551174 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
LINC02401-202ENST00000551174 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
LINC02401-202ENST00000551174 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
LINC02401-202ENST00000551174 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
LINC02401-202ENST00000551174 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
LINC02401-202ENST00000551174 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
LINC02401-202ENST00000551174 NESP48681 1621 aa12.05□□□□□ -0.48
LINC02401-202ENST00000551174 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
LINC02401-202ENST00000551174 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
LINC02401-202ENST00000551174 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
LINC02401-202ENST00000551174 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
LINC02401-202ENST00000551174 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
LINC02401-202ENST00000551174 PHF12Q96QT6 1004 aa12□□□□□ -0.49
LINC02401-202ENST00000551174 ATMINO43313 823 aaPredicted RBP11.97□□□□□ -0.49
LINC02401-202ENST00000551174 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
LINC02401-202ENST00000551174 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
LINC02401-202ENST00000551174 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
LINC02401-202ENST00000551174 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
LINC02401-202ENST00000551174 ST18O60284 1047 aa11.88□□□□□ -0.51
LINC02401-202ENST00000551174 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
LINC02401-202ENST00000551174 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
LINC02401-202ENST00000551174 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
LINC02401-202ENST00000551174 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
LINC02401-202ENST00000551174 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
LINC02401-202ENST00000551174 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
LINC02401-202ENST00000551174 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
LINC02401-202ENST00000551174 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
LINC02401-202ENST00000551174 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
LINC02401-202ENST00000551174 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
LINC02401-202ENST00000551174 CFTRP13569 1480 aa11.75□□□□□ -0.53
LINC02401-202ENST00000551174 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
LINC02401-202ENST00000551174 ZBTB22O15209 634 aa11.71□□□□□ -0.53
LINC02401-202ENST00000551174 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
LINC02401-202ENST00000551174 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
LINC02401-202ENST00000551174 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
LINC02401-202ENST00000551174 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
LINC02401-202ENST00000551174 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
LINC02401-202ENST00000551174 CUX2O14529 1486 aa11.64□□□□□ -0.55
LINC02401-202ENST00000551174 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
LINC02401-202ENST00000551174 SEC24BO95487 1268 aa11.6□□□□□ -0.55
LINC02401-202ENST00000551174 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
LINC02401-202ENST00000551174 WDR62O43379 1518 aa11.59□□□□□ -0.55
LINC02401-202ENST00000551174 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC02401-202ENST00000551174 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
LINC02401-202ENST00000551174 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
LINC02401-202ENST00000551174 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
LINC02401-202ENST00000551174 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
LINC02401-202ENST00000551174 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
LINC02401-202ENST00000551174 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
LINC02401-202ENST00000551174 BMP2KQ9NSY1 1161 aaPredicted RBP11.5□□□□□ -0.57
LINC02401-202ENST00000551174 CUX1P39880 1505 aa11.5□□□□□ -0.57
LINC02401-202ENST00000551174 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
LINC02401-202ENST00000551174 AQRO60306 1485 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC02401-202ENST00000551174 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
LINC02401-202ENST00000551174 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
LINC02401-202ENST00000551174 TDRD9Q8NDG6 1382 aaKnown RBP11.45□□□□□ -0.58
LINC02401-202ENST00000551174 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
LINC02401-202ENST00000551174 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
LINC02401-202ENST00000551174 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
LINC02401-202ENST00000551174 SOGA1O94964 1423 aa11.43□□□□□ -0.58
LINC02401-202ENST00000551174 SNPHO15079 494 aa11.43□□□□□ -0.58
LINC02401-202ENST00000551174 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
LINC02401-202ENST00000551174 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
LINC02401-202ENST00000551174 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
LINC02401-202ENST00000551174 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
LINC02401-202ENST00000551174 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
LINC02401-202ENST00000551174 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
LINC02401-202ENST00000551174 TIE1P35590 1138 aa11.37□□□□□ -0.59
LINC02401-202ENST00000551174 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
LINC02401-202ENST00000551174 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
LINC02401-202ENST00000551174 EMP3P54852 163 aa11.33□□□□□ -0.6
LINC02401-202ENST00000551174 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
LINC02401-202ENST00000551174 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
LINC02401-202ENST00000551174 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
LINC02401-202ENST00000551174 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
LINC02401-202ENST00000551174 IER5LQ5T953 404 aa11.3□□□□□ -0.6
LINC02401-202ENST00000551174 HS3ST6Q96QI5 342 aa11.3□□□□□ -0.6
LINC02401-202ENST00000551174 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
LINC02401-202ENST00000551174 SNAPC4Q5SXM2 1469 aa11.29□□□□□ -0.6
LINC02401-202ENST00000551174 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
LINC02401-202ENST00000551174 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
LINC02401-202ENST00000551174 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
LINC02401-202ENST00000551174 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
LINC02401-202ENST00000551174 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms