RNA–Protein interactions for RNA: ENST00000550641.5

CNOT2-225, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-225ENST00000550641 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
CNOT2-225ENST00000550641 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
CNOT2-225ENST00000550641 EEA1Q15075 1411 aa13.8□□□□□ -0.2
CNOT2-225ENST00000550641 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
CNOT2-225ENST00000550641 CUL7Q14999 1698 aa13.79□□□□□ -0.2
CNOT2-225ENST00000550641 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
CNOT2-225ENST00000550641 CARMIL1Q5VZK9 1371 aa13.76□□□□□ -0.21
CNOT2-225ENST00000550641 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
CNOT2-225ENST00000550641 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
CNOT2-225ENST00000550641 KIF21BO75037 1637 aa13.71□□□□□ -0.22
CNOT2-225ENST00000550641 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
CNOT2-225ENST00000550641 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
CNOT2-225ENST00000550641 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
CNOT2-225ENST00000550641 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
CNOT2-225ENST00000550641 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
CNOT2-225ENST00000550641 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
CNOT2-225ENST00000550641 DISP1Q96F81 1524 aa13.63□□□□□ -0.23
CNOT2-225ENST00000550641 TNIKQ9UKE5 1360 aa13.62□□□□□ -0.23
CNOT2-225ENST00000550641 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
CNOT2-225ENST00000550641 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
CNOT2-225ENST00000550641 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
CNOT2-225ENST00000550641 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
CNOT2-225ENST00000550641 PTPRGP23470 1445 aa13.57□□□□□ -0.24
CNOT2-225ENST00000550641 MAPKBP1O60336 1514 aa13.57□□□□□ -0.24
CNOT2-225ENST00000550641 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
CNOT2-225ENST00000550641 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
CNOT2-225ENST00000550641 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
CNOT2-225ENST00000550641 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
CNOT2-225ENST00000550641 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
CNOT2-225ENST00000550641 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
CNOT2-225ENST00000550641 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
CNOT2-225ENST00000550641 ABCC2Q92887 1545 aa13.5□□□□□ -0.25
CNOT2-225ENST00000550641 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
CNOT2-225ENST00000550641 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
CNOT2-225ENST00000550641 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
CNOT2-225ENST00000550641 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
CNOT2-225ENST00000550641 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-225ENST00000550641 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
CNOT2-225ENST00000550641 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
CNOT2-225ENST00000550641 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
CNOT2-225ENST00000550641 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
CNOT2-225ENST00000550641 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
CNOT2-225ENST00000550641 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
CNOT2-225ENST00000550641 ABCA8O94911 1581 aa13.43□□□□□ -0.26
CNOT2-225ENST00000550641 CLIP1P30622 1438 aa13.42□□□□□ -0.26
CNOT2-225ENST00000550641 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
CNOT2-225ENST00000550641 GLI2P10070 1586 aa13.4□□□□□ -0.26
CNOT2-225ENST00000550641 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
CNOT2-225ENST00000550641 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
CNOT2-225ENST00000550641 HRCP23327 699 aa13.39□□□□□ -0.27
CNOT2-225ENST00000550641 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
CNOT2-225ENST00000550641 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
CNOT2-225ENST00000550641 VPS8Q8N3P4 1428 aa13.35□□□□□ -0.27
CNOT2-225ENST00000550641 MAP3K4Q9Y6R4 1608 aa13.35□□□□□ -0.27
CNOT2-225ENST00000550641 COL17A1Q9UMD9 1497 aaPredicted RBP13.34□□□□□ -0.27
CNOT2-225ENST00000550641 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.28
CNOT2-225ENST00000550641 KDM6BO15054 1643 aa13.32□□□□□ -0.28
CNOT2-225ENST00000550641 ATP10BO94823 1461 aa13.31□□□□□ -0.28
CNOT2-225ENST00000550641 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
CNOT2-225ENST00000550641 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
CNOT2-225ENST00000550641 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
CNOT2-225ENST00000550641 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
CNOT2-225ENST00000550641 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
CNOT2-225ENST00000550641 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.29
CNOT2-225ENST00000550641 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
CNOT2-225ENST00000550641 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
CNOT2-225ENST00000550641 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
CNOT2-225ENST00000550641 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
CNOT2-225ENST00000550641 CFAP43Q8NDM7 1665 aa13.22□□□□□ -0.29
CNOT2-225ENST00000550641 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
CNOT2-225ENST00000550641 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
CNOT2-225ENST00000550641 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
CNOT2-225ENST00000550641 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-225ENST00000550641 ABCA9Q8IUA7 1624 aa13.19□□□□□ -0.3
CNOT2-225ENST00000550641 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
CNOT2-225ENST00000550641 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
CNOT2-225ENST00000550641 ARAP3Q8WWN8 1544 aa13.12□□□□□ -0.31
CNOT2-225ENST00000550641 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
CNOT2-225ENST00000550641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-225ENST00000550641 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
CNOT2-225ENST00000550641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.313e-8■■■□□ 17.7
CNOT2-225ENST00000550641 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
CNOT2-225ENST00000550641 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
CNOT2-225ENST00000550641 MAP3K1Q13233 1512 aa13.09□□□□□ -0.31
CNOT2-225ENST00000550641 FRMPD1Q5SYB0 1578 aa13.09□□□□□ -0.31
CNOT2-225ENST00000550641 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
CNOT2-225ENST00000550641 FMN1Q68DA7 1419 aa13.07□□□□□ -0.32
CNOT2-225ENST00000550641 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
CNOT2-225ENST00000550641 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
CNOT2-225ENST00000550641 NEO1Q92859 1461 aa13.06□□□□□ -0.32
CNOT2-225ENST00000550641 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
CNOT2-225ENST00000550641 APLP2Q06481 763 aa13.06□□□□□ -0.32
CNOT2-225ENST00000550641 KIF14Q15058 1648 aa13.04□□□□□ -0.32
CNOT2-225ENST00000550641 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
CNOT2-225ENST00000550641 PHLDB1Q86UU1 1377 aa13.03□□□□□ -0.32
CNOT2-225ENST00000550641 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
CNOT2-225ENST00000550641 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
CNOT2-225ENST00000550641 ATP1B4Q9UN42 357 aaPredicted RBP13.02□□□□□ -0.33
CNOT2-225ENST00000550641 FANCAO15360 1455 aa13.02□□□□□ -0.33
CNOT2-225ENST00000550641 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms