RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 CUL7Q14999 1698 aa10.92□□□□□ -0.66
TMEM106C-215ENST00000550552 ERCC6L2Q5T890 1561 aa10.92□□□□□ -0.66
TMEM106C-215ENST00000550552 KIAA0586Q9BVV6 1533 aa10.91□□□□□ -0.66
TMEM106C-215ENST00000550552 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
TMEM106C-215ENST00000550552 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
TMEM106C-215ENST00000550552 RAPGEF2Q9Y4G8 1499 aa10.9□□□□□ -0.66
TMEM106C-215ENST00000550552 SHROOM2Q13796 1616 aa10.89□□□□□ -0.67
TMEM106C-215ENST00000550552 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
TMEM106C-215ENST00000550552 PRXQ9BXM0 1461 aa10.88□□□□□ -0.67
TMEM106C-215ENST00000550552 EEA1Q15075 1411 aa10.83□□□□□ -0.68
TMEM106C-215ENST00000550552 IQGAP2Q13576 1575 aa10.8□□□□□ -0.68
TMEM106C-215ENST00000550552 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
TMEM106C-215ENST00000550552 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
TMEM106C-215ENST00000550552 PTPRGP23470 1445 aa10.78□□□□□ -0.68
TMEM106C-215ENST00000550552 CARMIL2Q6F5E8 1435 aa10.77□□□□□ -0.68
TMEM106C-215ENST00000550552 UGGT2Q9NYU1 1516 aa10.77□□□□□ -0.69
TMEM106C-215ENST00000550552 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
TMEM106C-215ENST00000550552 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
TMEM106C-215ENST00000550552 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
TMEM106C-215ENST00000550552 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
TMEM106C-215ENST00000550552 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
TMEM106C-215ENST00000550552 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
TMEM106C-215ENST00000550552 UBTFP17480 764 aaKnown RBP10.7□□□□□ -0.7
TMEM106C-215ENST00000550552 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
TMEM106C-215ENST00000550552 KIAA0556O60303 1618 aa10.69□□□□□ -0.7
TMEM106C-215ENST00000550552 KIF21BO75037 1637 aa10.69□□□□□ -0.7
TMEM106C-215ENST00000550552 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
TMEM106C-215ENST00000550552 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
TMEM106C-215ENST00000550552 UACAQ9BZF9 1416 aa10.68□□□□□ -0.7
TMEM106C-215ENST00000550552 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
TMEM106C-215ENST00000550552 PLB1Q6P1J6 1458 aa10.66□□□□□ -0.7
TMEM106C-215ENST00000550552 ABCC2Q92887 1545 aa10.65□□□□□ -0.7
TMEM106C-215ENST00000550552 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
TMEM106C-215ENST00000550552 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
TMEM106C-215ENST00000550552 SAMD9Q5K651 1589 aa10.62□□□□□ -0.71
TMEM106C-215ENST00000550552 MAPKBP1O60336 1514 aa10.62□□□□□ -0.71
TMEM106C-215ENST00000550552 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
TMEM106C-215ENST00000550552 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
TMEM106C-215ENST00000550552 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
TMEM106C-215ENST00000550552 ABCA8O94911 1581 aa10.6□□□□□ -0.71
TMEM106C-215ENST00000550552 ASXL2Q76L83 1435 aa10.6□□□□□ -0.71
TMEM106C-215ENST00000550552 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
TMEM106C-215ENST00000550552 ATP10BO94823 1461 aa10.57□□□□□ -0.72
TMEM106C-215ENST00000550552 ARHGAP35Q9NRY4 1499 aa10.57□□□□□ -0.72
TMEM106C-215ENST00000550552 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
TMEM106C-215ENST00000550552 EFCAB5A4FU69 1503 aa10.55□□□□□ -0.72
TMEM106C-215ENST00000550552 DIP2BQ9P265 1576 aa10.55□□□□□ -0.72
TMEM106C-215ENST00000550552 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
TMEM106C-215ENST00000550552 KIF13AQ9H1H9 1805 aa10.54□□□□□ -0.72
TMEM106C-215ENST00000550552 NUP153P49790 1475 aaKnown RBP10.54□□□□□ -0.72
TMEM106C-215ENST00000550552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
TMEM106C-215ENST00000550552 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
TMEM106C-215ENST00000550552 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
TMEM106C-215ENST00000550552 WDR7Q9Y4E6 1490 aa10.52□□□□□ -0.73
TMEM106C-215ENST00000550552 RAPGEF6Q8TEU7 1601 aa10.51□□□□□ -0.73
TMEM106C-215ENST00000550552 ATP1B4Q9UN42 357 aaPredicted RBP10.51□□□□□ -0.73
TMEM106C-215ENST00000550552 GLI2P10070 1586 aa10.5□□□□□ -0.73
TMEM106C-215ENST00000550552 CLIP1P30622 1438 aa10.5□□□□□ -0.73
TMEM106C-215ENST00000550552 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
TMEM106C-215ENST00000550552 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
TMEM106C-215ENST00000550552 CD109Q6YHK3 1445 aa10.46□□□□□ -0.74
TMEM106C-215ENST00000550552 CDK13Q14004 1512 aaKnown RBP10.45□□□□□ -0.74
TMEM106C-215ENST00000550552 CEP162Q5TB80 1403 aa10.44□□□□□ -0.74
TMEM106C-215ENST00000550552 CASKIN1Q8WXD9 1431 aa10.44□□□□□ -0.74
TMEM106C-215ENST00000550552 MAP3K4Q9Y6R4 1608 aa10.44□□□□□ -0.74
TMEM106C-215ENST00000550552 COL17A1Q9UMD9 1497 aaPredicted RBP10.43□□□□□ -0.74
TMEM106C-215ENST00000550552 TSPOAP1O95153 1857 aa10.43□□□□□ -0.74
TMEM106C-215ENST00000550552 PPRC1Q5VV67 1664 aaKnown RBP10.43□□□□□ -0.74
TMEM106C-215ENST00000550552 CDK11AQ9UQ88 783 aaPredicted RBP10.41□□□□□ -0.74
TMEM106C-215ENST00000550552 MAGI3Q5TCQ9 1506 aa10.41□□□□□ -0.74
TMEM106C-215ENST00000550552 HECW1Q76N89 1606 aa10.4□□□□□ -0.75
TMEM106C-215ENST00000550552 TEX14Q8IWB6 1497 aa10.39□□□□□ -0.75
TMEM106C-215ENST00000550552 ABCA9Q8IUA7 1624 aa10.38□□□□□ -0.75
TMEM106C-215ENST00000550552 PCF11O94913 1555 aaKnown RBP10.38□□□□□ -0.75
TMEM106C-215ENST00000550552 FYCO1Q9BQS8 1478 aa10.37□□□□□ -0.75
TMEM106C-215ENST00000550552 KDM6BO15054 1643 aa10.37□□□□□ -0.75
TMEM106C-215ENST00000550552 CFAP43Q8NDM7 1665 aa10.37□□□□□ -0.75
TMEM106C-215ENST00000550552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM106C-215ENST00000550552 LRRIQ1Q96JM4 1722 aa10.36□□□□□ -0.75
TMEM106C-215ENST00000550552 TROQ12816 1431 aaPredicted RBP10.36□□□□□ -0.75
TMEM106C-215ENST00000550552 RAPGEF3O95398 923 aa10.35□□□□□ -0.75
TMEM106C-215ENST00000550552 CCDC18Q5T9S5 1454 aa10.35□□□□□ -0.75
TMEM106C-215ENST00000550552 PLCH2O75038 1416 aa10.33□□□□□ -0.76
TMEM106C-215ENST00000550552 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
TMEM106C-215ENST00000550552 PHLDB1Q86UU1 1377 aa10.33□□□□□ -0.76
TMEM106C-215ENST00000550552 TTC37Q6PGP7 1564 aa10.33□□□□□ -0.76
TMEM106C-215ENST00000550552 NEO1Q92859 1461 aa10.32□□□□□ -0.76
TMEM106C-215ENST00000550552 KIF14Q15058 1648 aa10.32□□□□□ -0.76
TMEM106C-215ENST00000550552 AKNAQ7Z591 1439 aa10.32□□□□□ -0.76
TMEM106C-215ENST00000550552 FANCAO15360 1455 aa10.31□□□□□ -0.76
TMEM106C-215ENST00000550552 EFCAB2Q5VUJ9 269 aa10.31□□□□□ -0.76
TMEM106C-215ENST00000550552 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
TMEM106C-215ENST00000550552 MTUS2Q5JR59 1369 aa10.28□□□□□ -0.76
TMEM106C-215ENST00000550552 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
TMEM106C-215ENST00000550552 SCAPERQ9BY12 1400 aa10.27□□□□□ -0.77
TMEM106C-215ENST00000550552 KDM4FA0A1W2PPD8 638 aa10.27□□□□□ -0.77
TMEM106C-215ENST00000550552 DENND4BO75064 1496 aaPredicted RBP10.27□□□□□ -0.77
TMEM106C-215ENST00000550552 AFAP1Q8N556 730 aa10.26□□□□□ -0.77
TMEM106C-215ENST00000550552 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
TMEM106C-215ENST00000550552 GPATCH8Q9UKJ3 1502 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms