RNA–Protein interactions for RNA: ENST00000550551.5

MTA1-217, Transcript of metastasis associated 1, humanhuman

TSL 3

Gene MTA1, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-217ENST00000550551 IGF1RP08069 1367 aa35.68■■■■□ 3.3
MTA1-217ENST00000550551 CUL7Q14999 1698 aa35.6■■■■□ 3.29
MTA1-217ENST00000550551 KIAA0586Q9BVV6 1533 aa35.56■■■■□ 3.28
MTA1-217ENST00000550551 KIF13AQ9H1H9 1805 aa35.48■■■■□ 3.27
MTA1-217ENST00000550551 NPM1P06748 294 aaKnown RBP eCLIP35.46■■■■□ 3.27
MTA1-217ENST00000550551 CARMIL1Q5VZK9 1371 aa35.45■■■■□ 3.27
MTA1-217ENST00000550551 ADCY10Q96PN6 1610 aa35.38■■■■□ 3.25
MTA1-217ENST00000550551 AEBP2Q6ZN18 517 aaPredicted RBP35.35■■■■□ 3.25
MTA1-217ENST00000550551 MAPKBP1O60336 1514 aa35.33■■■■□ 3.25
MTA1-217ENST00000550551 FAM69CQ0P6D2 419 aa35.33■■■■□ 3.25
MTA1-217ENST00000550551 ABCC10Q5T3U5 1492 aa35.32■■■■□ 3.24
MTA1-217ENST00000550551 PTPRGP23470 1445 aa35.26■■■■□ 3.24
MTA1-217ENST00000550551 CARMIL2Q6F5E8 1435 aa35.23■■■■□ 3.23
MTA1-217ENST00000550551 TTBK1Q5TCY1 1321 aaPredicted RBP35.22■■■■□ 3.23
MTA1-217ENST00000550551 IQGAP2Q13576 1575 aa35.21■■■■□ 3.23
MTA1-217ENST00000550551 DIP2BQ9P265 1576 aa35.21■■■■□ 3.23
MTA1-217ENST00000550551 TNIKQ9UKE5 1360 aa35.18■■■■□ 3.22
MTA1-217ENST00000550551 RAPGEF2Q9Y4G8 1499 aa35.12■■■■□ 3.21
MTA1-217ENST00000550551 ABCC2Q92887 1545 aa35.05■■■■□ 3.2
MTA1-217ENST00000550551 DISP1Q96F81 1524 aa35.04■■■■□ 3.2
MTA1-217ENST00000550551 TSPOAP1O95153 1857 aa35.03■■■■□ 3.2
MTA1-217ENST00000550551 UHRF1BP1LA0JNW5 1464 aa34.98■■■■□ 3.19
MTA1-217ENST00000550551 UGGT2Q9NYU1 1516 aa34.98■■■■□ 3.19
MTA1-217ENST00000550551 UACAQ9BZF9 1416 aa34.98■■■■□ 3.19
MTA1-217ENST00000550551 ASXL2Q76L83 1435 aa34.94■■■■□ 3.18
MTA1-217ENST00000550551 KDM6BO15054 1643 aa34.93■■■■□ 3.18
MTA1-217ENST00000550551 PLB1Q6P1J6 1458 aa34.92■■■■□ 3.18
MTA1-217ENST00000550551 KIAA0556O60303 1618 aa34.88■■■■□ 3.17
MTA1-217ENST00000550551 GLI2P10070 1586 aa34.83■■■■□ 3.17
MTA1-217ENST00000550551 CTTNBP2Q8WZ74 1663 aa34.83■■■■□ 3.17
MTA1-217ENST00000550551 KDM5BQ9UGL1 1544 aa34.82■■■■□ 3.16
MTA1-217ENST00000550551 ZCCHC11Q5TAX3 1644 aaKnown RBP34.76■■■■□ 3.15
MTA1-217ENST00000550551 PPRC1Q5VV67 1664 aaKnown RBP34.74■■■■□ 3.15
MTA1-217ENST00000550551 PRXQ9BXM0 1461 aa34.73■■■■□ 3.15
MTA1-217ENST00000550551 EPRSP07814 1512 aaKnown RBP34.72■■■■□ 3.15
MTA1-217ENST00000550551 GOLGA3Q08378 1498 aa34.71■■■■□ 3.15
MTA1-217ENST00000550551 MAP3K4Q9Y6R4 1608 aa34.64■■■■□ 3.14
MTA1-217ENST00000550551 KDM4FA0A1W2PPD8 638 aa34.61■■■■□ 3.13
MTA1-217ENST00000550551 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
MTA1-217ENST00000550551 ABCA8O94911 1581 aa34.57■■■■□ 3.12
MTA1-217ENST00000550551 TEX14Q8IWB6 1497 aa34.56■■■■□ 3.12
MTA1-217ENST00000550551 COL17A1Q9UMD9 1497 aaPredicted RBP34.52■■■■□ 3.12
MTA1-217ENST00000550551 CSRNP3Q8WYN3 585 aa34.51■■■■□ 3.12
MTA1-217ENST00000550551 KCNH8Q96L42 1107 aa34.47■■■■□ 3.11
MTA1-217ENST00000550551 FAM9AQ8IZU1 332 aaPredicted RBP34.46■■■■□ 3.11
MTA1-217ENST00000550551 P3H3Q8IVL6 736 aa34.45■■■■□ 3.11
MTA1-217ENST00000550551 CD109Q6YHK3 1445 aa34.4■■■■□ 3.1
MTA1-217ENST00000550551 CFAP43Q8NDM7 1665 aa34.38■■■■□ 3.09
MTA1-217ENST00000550551 MAGI3Q5TCQ9 1506 aa34.35■■■■□ 3.09
MTA1-217ENST00000550551 ARID3CA6NKF2 412 aa34.35■■■■□ 3.09
MTA1-217ENST00000550551 EEA1Q15075 1411 aa34.32■■■■□ 3.08
MTA1-217ENST00000550551 ADGRL1O94910 1474 aa34.32■■■■□ 3.08
MTA1-217ENST00000550551 SAMD9Q5K651 1589 aa34.32■■■■□ 3.08
MTA1-217ENST00000550551 ATP10BO94823 1461 aa34.3■■■■□ 3.08
MTA1-217ENST00000550551 RANGAP1P46060 587 aaPredicted RBP34.21■■■■□ 3.07
MTA1-217ENST00000550551 RAPGEF6Q8TEU7 1601 aa34.21■■■■□ 3.07
MTA1-217ENST00000550551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.14■■■■□ 3.06
MTA1-217ENST00000550551 HNRNPUL2Q1KMD3 747 aaKnown RBP34.14■■■■□ 3.06
MTA1-217ENST00000550551 ABCA9Q8IUA7 1624 aa34.12■■■■□ 3.05
MTA1-217ENST00000550551 FHOD3Q2V2M9 1422 aa34.11■■■■□ 3.05
MTA1-217ENST00000550551 ARAP3Q8WWN8 1544 aa34.09■■■■□ 3.05
MTA1-217ENST00000550551 NUP153P49790 1475 aaKnown RBP34.07■■■■□ 3.05
MTA1-217ENST00000550551 KIF21BO75037 1637 aa34.05■■■■□ 3.04
MTA1-217ENST00000550551 PHLDB1Q86UU1 1377 aa34.03■■■■□ 3.04
MTA1-217ENST00000550551 EFCAB5A4FU69 1503 aa33.97■■■■□ 3.03
MTA1-217ENST00000550551 PLEKHD1A6NEE1 506 aa33.95■■■■□ 3.03
MTA1-217ENST00000550551 NEO1Q92859 1461 aa33.95■■■■□ 3.02
MTA1-217ENST00000550551 RAPGEF3O95398 923 aa33.92■■■■□ 3.02
MTA1-217ENST00000550551 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
MTA1-217ENST00000550551 UBTFP17480 764 aaKnown RBP33.86■■■■□ 3.01
MTA1-217ENST00000550551 HECW2Q9P2P5 1572 aa33.85■■■■□ 3.01
MTA1-217ENST00000550551 CHIC1Q5VXU3 224 aa33.84■■■■□ 3.01
MTA1-217ENST00000550551 FRMPD1Q5SYB0 1578 aa33.78■■■■□ 3
MTA1-217ENST00000550551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.78■■■■□ 3
MTA1-217ENST00000550551 CDK13Q14004 1512 aaKnown RBP33.74■■■□□ 2.99
MTA1-217ENST00000550551 AKNAQ7Z591 1439 aa33.73■■■□□ 2.99
MTA1-217ENST00000550551 FANCAO15360 1455 aa33.73■■■□□ 2.99
MTA1-217ENST00000550551 DENND4BO75064 1496 aaPredicted RBP33.72■■■□□ 2.99
MTA1-217ENST00000550551 TTC37Q6PGP7 1564 aa33.72■■■□□ 2.99
MTA1-217ENST00000550551 CFAP74Q9C0B2 1584 aa33.71■■■□□ 2.99
MTA1-217ENST00000550551 ATP1B4Q9UN42 357 aaPredicted RBP33.7■■■□□ 2.99
MTA1-217ENST00000550551 ADAMTSL3P82987 1691 aa33.7■■■□□ 2.99
MTA1-217ENST00000550551 FMN1Q68DA7 1419 aa33.7■■■□□ 2.98
MTA1-217ENST00000550551 ARID4BQ4LE39 1312 aaPredicted RBP33.68■■■□□ 2.98
MTA1-217ENST00000550551 ARHGAP35Q9NRY4 1499 aa33.68■■■□□ 2.98
MTA1-217ENST00000550551 RICTORQ6R327 1708 aa33.67■■■□□ 2.98
MTA1-217ENST00000550551 HECW1Q76N89 1606 aa33.64■■■□□ 2.98
MTA1-217ENST00000550551 BCORL1Q5H9F3 1711 aa33.63■■■□□ 2.97
MTA1-217ENST00000550551 PTPRMP28827 1452 aa33.63■■■□□ 2.97
MTA1-217ENST00000550551 ARHGEF40Q8TER5 1519 aa33.62■■■□□ 2.97
MTA1-217ENST00000550551 ILDR1Q86SU0 546 aaPredicted RBP33.59■■■□□ 2.97
MTA1-217ENST00000550551 PLCH2O75038 1416 aa33.57■■■□□ 2.96
MTA1-217ENST00000550551 CDK11AQ9UQ88 783 aaPredicted RBP33.57■■■□□ 2.96
MTA1-217ENST00000550551 ZMYM4Q5VZL5 1548 aa33.54■■■□□ 2.96
MTA1-217ENST00000550551 MADDQ8WXG6 1647 aa33.54■■■□□ 2.96
MTA1-217ENST00000550551 SCAPERQ9BY12 1400 aa33.51■■■□□ 2.95
MTA1-217ENST00000550551 ZFYVE16Q7Z3T8 1539 aa33.49■■■□□ 2.95
MTA1-217ENST00000550551 MYO5CQ9NQX4 1742 aa33.48■■■□□ 2.95
MTA1-217ENST00000550551 YEATS2Q9ULM3 1422 aa33.48■■■□□ 2.95
MTA1-217ENST00000550551 MAGI2Q86UL8 1455 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms