RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 KIF27Q86VH2 1401 aa38.06■■■■□ 3.68
SMARCC2-210ENST00000550519 KIAA0586Q9BVV6 1533 aa37.97■■■■□ 3.67
SMARCC2-210ENST00000550519 CUL7Q14999 1698 aa37.92■■■■□ 3.66
SMARCC2-210ENST00000550519 CARMIL1Q5VZK9 1371 aa37.82■■■■□ 3.65
SMARCC2-210ENST00000550519 KIF13AQ9H1H9 1805 aa37.8■■■■□ 3.64
SMARCC2-210ENST00000550519 NPM1P06748 294 aaKnown RBP eCLIP37.8■■■■□ 3.64
SMARCC2-210ENST00000550519 MAPKBP1O60336 1514 aa37.74■■■■□ 3.63
SMARCC2-210ENST00000550519 ABCC10Q5T3U5 1492 aa37.74■■■■□ 3.63
SMARCC2-210ENST00000550519 ADCY10Q96PN6 1610 aa37.74■■■■□ 3.63
SMARCC2-210ENST00000550519 AEBP2Q6ZN18 517 aaPredicted RBP37.73■■■■□ 3.63
SMARCC2-210ENST00000550519 FAM69CQ0P6D2 419 aa37.71■■■■□ 3.63
SMARCC2-210ENST00000550519 PTPRGP23470 1445 aa37.62■■■■□ 3.61
SMARCC2-210ENST00000550519 DIP2BQ9P265 1576 aa37.59■■■■□ 3.61
SMARCC2-210ENST00000550519 CARMIL2Q6F5E8 1435 aa37.57■■■■□ 3.6
SMARCC2-210ENST00000550519 TNIKQ9UKE5 1360 aa37.55■■■■□ 3.6
SMARCC2-210ENST00000550519 IQGAP2Q13576 1575 aa37.54■■■■□ 3.6
SMARCC2-210ENST00000550519 TTBK1Q5TCY1 1321 aaPredicted RBP37.48■■■■□ 3.59
SMARCC2-210ENST00000550519 RAPGEF2Q9Y4G8 1499 aa37.45■■■■□ 3.59
SMARCC2-210ENST00000550519 ABCC2Q92887 1545 aa37.42■■■■□ 3.58
SMARCC2-210ENST00000550519 DISP1Q96F81 1524 aa37.41■■■■□ 3.58
SMARCC2-210ENST00000550519 UHRF1BP1LA0JNW5 1464 aa37.37■■■■□ 3.57
SMARCC2-210ENST00000550519 UGGT2Q9NYU1 1516 aa37.34■■■■□ 3.57
SMARCC2-210ENST00000550519 UACAQ9BZF9 1416 aa37.33■■■■□ 3.57
SMARCC2-210ENST00000550519 ASXL2Q76L83 1435 aa37.3■■■■□ 3.56
SMARCC2-210ENST00000550519 PLB1Q6P1J6 1458 aa37.28■■■■□ 3.56
SMARCC2-210ENST00000550519 KDM6BO15054 1643 aa37.26■■■■□ 3.56
SMARCC2-210ENST00000550519 TSPOAP1O95153 1857 aa37.24■■■■□ 3.55
SMARCC2-210ENST00000550519 KIAA0556O60303 1618 aa37.2■■■■□ 3.55
SMARCC2-210ENST00000550519 GLI2P10070 1586 aa37.2■■■■□ 3.55
SMARCC2-210ENST00000550519 KDM5BQ9UGL1 1544 aa37.2■■■■□ 3.55
SMARCC2-210ENST00000550519 PRXQ9BXM0 1461 aa37.07■■■■□ 3.53
SMARCC2-210ENST00000550519 EPRSP07814 1512 aaKnown RBP37.07■■■■□ 3.53
SMARCC2-210ENST00000550519 PPRC1Q5VV67 1664 aaKnown RBP37.06■■■■□ 3.52
SMARCC2-210ENST00000550519 ZCCHC11Q5TAX3 1644 aaKnown RBP37.03■■■■□ 3.52
SMARCC2-210ENST00000550519 CTTNBP2Q8WZ74 1663 aa37.03■■■■□ 3.52
SMARCC2-210ENST00000550519 KDM4FA0A1W2PPD8 638 aa37.02■■■■□ 3.52
SMARCC2-210ENST00000550519 GOLGA3Q08378 1498 aa37.01■■■■□ 3.52
SMARCC2-210ENST00000550519 MAP3K4Q9Y6R4 1608 aa36.96■■■■□ 3.51
SMARCC2-210ENST00000550519 WDR7Q9Y4E6 1490 aa36.92■■■■□ 3.5
SMARCC2-210ENST00000550519 COL17A1Q9UMD9 1497 aaPredicted RBP36.9■■■■□ 3.5
SMARCC2-210ENST00000550519 ABCA8O94911 1581 aa36.89■■■■□ 3.5
SMARCC2-210ENST00000550519 TEX14Q8IWB6 1497 aa36.88■■■■□ 3.5
SMARCC2-210ENST00000550519 CSRNP3Q8WYN3 585 aa36.78■■■■□ 3.48
SMARCC2-210ENST00000550519 KCNH8Q96L42 1107 aa36.73■■■■□ 3.47
SMARCC2-210ENST00000550519 CD109Q6YHK3 1445 aa36.71■■■■□ 3.47
SMARCC2-210ENST00000550519 MAGI3Q5TCQ9 1506 aa36.69■■■■□ 3.46
SMARCC2-210ENST00000550519 P3H3Q8IVL6 736 aa36.69■■■■□ 3.46
SMARCC2-210ENST00000550519 FAM9AQ8IZU1 332 aaPredicted RBP36.67■■■■□ 3.46
SMARCC2-210ENST00000550519 CFAP43Q8NDM7 1665 aa36.65■■■■□ 3.46
SMARCC2-210ENST00000550519 ADGRL1O94910 1474 aa36.64■■■■□ 3.46
SMARCC2-210ENST00000550519 ATP10BO94823 1461 aa36.62■■■■□ 3.45
SMARCC2-210ENST00000550519 EEA1Q15075 1411 aa36.59■■■■□ 3.45
SMARCC2-210ENST00000550519 SAMD9Q5K651 1589 aa36.58■■■■□ 3.45
SMARCC2-210ENST00000550519 ARID3CA6NKF2 412 aa36.58■■■■□ 3.45
SMARCC2-210ENST00000550519 RAPGEF6Q8TEU7 1601 aa36.44■■■■□ 3.42
SMARCC2-210ENST00000550519 ARAP3Q8WWN8 1544 aa36.42■■■■□ 3.42
SMARCC2-210ENST00000550519 ABCA9Q8IUA7 1624 aa36.39■■■■□ 3.42
SMARCC2-210ENST00000550519 RANGAP1P46060 587 aaPredicted RBP36.37■■■■□ 3.41
SMARCC2-210ENST00000550519 NUP153P49790 1475 aaKnown RBP36.37■■■■□ 3.41
SMARCC2-210ENST00000550519 FHOD3Q2V2M9 1422 aa36.36■■■■□ 3.41
SMARCC2-210ENST00000550519 PHLDB1Q86UU1 1377 aa36.35■■■■□ 3.41
SMARCC2-210ENST00000550519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.34■■■■□ 3.41
SMARCC2-210ENST00000550519 HNRNPUL2Q1KMD3 747 aaKnown RBP36.34■■■■□ 3.41
SMARCC2-210ENST00000550519 KIF21BO75037 1637 aa36.26■■■■□ 3.39
SMARCC2-210ENST00000550519 NEO1Q92859 1461 aa36.25■■■■□ 3.39
SMARCC2-210ENST00000550519 EFCAB5A4FU69 1503 aa36.21■■■■□ 3.39
SMARCC2-210ENST00000550519 RAPGEF3O95398 923 aa36.2■■■■□ 3.39
SMARCC2-210ENST00000550519 PLEKHD1A6NEE1 506 aa36.19■■■■□ 3.38
SMARCC2-210ENST00000550519 HECW2Q9P2P5 1572 aa36.15■■■■□ 3.38
SMARCC2-210ENST00000550519 FRMPD1Q5SYB0 1578 aa36.06■■■■□ 3.36
SMARCC2-210ENST00000550519 CHIC1Q5VXU3 224 aa36.03■■■■□ 3.36
SMARCC2-210ENST00000550519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.03■■■■□ 3.366e-6■■□□□ 13.3
SMARCC2-210ENST00000550519 UBTFP17480 764 aaKnown RBP36.02■■■■□ 3.36
SMARCC2-210ENST00000550519 AKNAQ7Z591 1439 aa36■■■■□ 3.35
SMARCC2-210ENST00000550519 FANCAO15360 1455 aa35.99■■■■□ 3.35
SMARCC2-210ENST00000550519 DENND4BO75064 1496 aaPredicted RBP35.99■■■■□ 3.35
SMARCC2-210ENST00000550519 EHMT2Q96KQ7 1210 aa35.98■■■■□ 3.35
SMARCC2-210ENST00000550519 CDK13Q14004 1512 aaKnown RBP35.97■■■■□ 3.35
SMARCC2-210ENST00000550519 ADAMTSL3P82987 1691 aa35.97■■■■□ 3.35
SMARCC2-210ENST00000550519 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
SMARCC2-210ENST00000550519 PTPRMP28827 1452 aa35.92■■■■□ 3.34
SMARCC2-210ENST00000550519 FMN1Q68DA7 1419 aa35.92■■■■□ 3.34
SMARCC2-210ENST00000550519 ILDR1Q86SU0 546 aaPredicted RBP35.92■■■■□ 3.34
SMARCC2-210ENST00000550519 CFAP74Q9C0B2 1584 aa35.91■■■■□ 3.34
SMARCC2-210ENST00000550519 ARHGAP35Q9NRY4 1499 aa35.91■■■■□ 3.34
SMARCC2-210ENST00000550519 RICTORQ6R327 1708 aa35.89■■■■□ 3.34
SMARCC2-210ENST00000550519 ARID4BQ4LE39 1312 aaPredicted RBP35.88■■■■□ 3.33
SMARCC2-210ENST00000550519 ARHGEF40Q8TER5 1519 aa35.87■■■■□ 3.33
SMARCC2-210ENST00000550519 BCORL1Q5H9F3 1711 aa35.86■■■■□ 3.33
SMARCC2-210ENST00000550519 PLCH2O75038 1416 aa35.83■■■■□ 3.33
SMARCC2-210ENST00000550519 ATP1B4Q9UN42 357 aaPredicted RBP35.83■■■■□ 3.33
SMARCC2-210ENST00000550519 HECW1Q76N89 1606 aa35.82■■■■□ 3.32
SMARCC2-210ENST00000550519 ZMYM4Q5VZL5 1548 aa35.81■■■■□ 3.32
SMARCC2-210ENST00000550519 CDK11AQ9UQ88 783 aaPredicted RBP35.78■■■■□ 3.32
SMARCC2-210ENST00000550519 MADDQ8WXG6 1647 aa35.78■■■■□ 3.32
SMARCC2-210ENST00000550519 MAGI2Q86UL8 1455 aa35.75■■■■□ 3.31
SMARCC2-210ENST00000550519 SCAPERQ9BY12 1400 aa35.74■■■■□ 3.31
SMARCC2-210ENST00000550519 YEATS2Q9ULM3 1422 aa35.74■■■■□ 3.31
SMARCC2-210ENST00000550519 ZFYVE16Q7Z3T8 1539 aa35.73■■■■□ 3.31
SMARCC2-210ENST00000550519 POGZQ7Z3K3 1410 aa35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms