RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 ERCC6L2Q5T890 1561 aa34.26■■■■□ 3.07
GCN1-207ENST00000550471 RUSC2Q8N2Y8 1516 aa34.25■■■■□ 3.07
GCN1-207ENST00000550471 KIAA0586Q9BVV6 1533 aa34.24■■■■□ 3.07
GCN1-207ENST00000550471 CARMIL1Q5VZK9 1371 aa34.22■■■■□ 3.07
GCN1-207ENST00000550471 NPM1P06748 294 aaKnown RBP eCLIP33.97■■■■□ 3.03
GCN1-207ENST00000550471 RAPGEF2Q9Y4G8 1499 aa33.96■■■■□ 3.03
GCN1-207ENST00000550471 CARMIL2Q6F5E8 1435 aa33.96■■■■□ 3.03
GCN1-207ENST00000550471 IQGAP2Q13576 1575 aa33.89■■■■□ 3.02
GCN1-207ENST00000550471 PTPRGP23470 1445 aa33.85■■■■□ 3.01
GCN1-207ENST00000550471 TNIKQ9UKE5 1360 aa33.84■■■■□ 3.01
GCN1-207ENST00000550471 MAPKBP1O60336 1514 aa33.79■■■■□ 3
GCN1-207ENST00000550471 ADCY10Q96PN6 1610 aa33.75■■■□□ 2.99
GCN1-207ENST00000550471 UGGT2Q9NYU1 1516 aa33.73■■■□□ 2.99
GCN1-207ENST00000550471 ABCC10Q5T3U5 1492 aa33.69■■■□□ 2.98
GCN1-207ENST00000550471 PRXQ9BXM0 1461 aa33.67■■■□□ 2.98
GCN1-207ENST00000550471 DISP1Q96F81 1524 aa33.66■■■□□ 2.98
GCN1-207ENST00000550471 UHRF1BP1LA0JNW5 1464 aa33.63■■■□□ 2.97
GCN1-207ENST00000550471 FAM69CQ0P6D2 419 aa33.63■■■□□ 2.97
GCN1-207ENST00000550471 KIF13AQ9H1H9 1805 aa33.63■■■□□ 2.97
GCN1-207ENST00000550471 ABCC2Q92887 1545 aa33.61■■■□□ 2.97
GCN1-207ENST00000550471 GOLGA3Q08378 1498 aa33.6■■■□□ 2.97
GCN1-207ENST00000550471 UACAQ9BZF9 1416 aa33.6■■■□□ 2.97
GCN1-207ENST00000550471 EEA1Q15075 1411 aa33.59■■■□□ 2.97
GCN1-207ENST00000550471 CTTNBP2Q8WZ74 1663 aa33.57■■■□□ 2.96
GCN1-207ENST00000550471 TTBK1Q5TCY1 1321 aaPredicted RBP33.55■■■□□ 2.96
GCN1-207ENST00000550471 KIAA0556O60303 1618 aa33.55■■■□□ 2.96
GCN1-207ENST00000550471 CSRNP3Q8WYN3 585 aa33.54■■■□□ 2.96
GCN1-207ENST00000550471 DIP2BQ9P265 1576 aa33.54■■■□□ 2.96
GCN1-207ENST00000550471 PLB1Q6P1J6 1458 aa33.5■■■□□ 2.95
GCN1-207ENST00000550471 FAM9AQ8IZU1 332 aaPredicted RBP33.5■■■□□ 2.95
GCN1-207ENST00000550471 KDM5BQ9UGL1 1544 aa33.43■■■□□ 2.94
GCN1-207ENST00000550471 ASXL2Q76L83 1435 aa33.42■■■□□ 2.94
GCN1-207ENST00000550471 GLI2P10070 1586 aa33.34■■■□□ 2.93
GCN1-207ENST00000550471 ZCCHC11Q5TAX3 1644 aaKnown RBP33.25■■■□□ 2.91
GCN1-207ENST00000550471 ABCA8O94911 1581 aa33.24■■■□□ 2.91
GCN1-207ENST00000550471 EPRSP07814 1512 aaKnown RBP33.22■■■□□ 2.91
GCN1-207ENST00000550471 AEBP2Q6ZN18 517 aaPredicted RBP33.19■■■□□ 2.9
GCN1-207ENST00000550471 KDM6BO15054 1643 aa33.19■■■□□ 2.9
GCN1-207ENST00000550471 WDR7Q9Y4E6 1490 aa33.18■■■□□ 2.9
GCN1-207ENST00000550471 TSPOAP1O95153 1857 aa33.16■■■□□ 2.9
GCN1-207ENST00000550471 TEX14Q8IWB6 1497 aa33.14■■■□□ 2.9
GCN1-207ENST00000550471 SAMD9Q5K651 1589 aa33.13■■■□□ 2.89
GCN1-207ENST00000550471 KIF21BO75037 1637 aa33.13■■■□□ 2.89
GCN1-207ENST00000550471 CHIC1Q5VXU3 224 aa33.11■■■□□ 2.89
GCN1-207ENST00000550471 MAP3K4Q9Y6R4 1608 aa33.09■■■□□ 2.89
GCN1-207ENST00000550471 P3H3Q8IVL6 736 aa33.06■■■□□ 2.88
GCN1-207ENST00000550471 PPRC1Q5VV67 1664 aaKnown RBP33.03■■■□□ 2.88
GCN1-207ENST00000550471 EFCAB5A4FU69 1503 aa32.99■■■□□ 2.87
GCN1-207ENST00000550471 ATP10BO94823 1461 aa32.96■■■□□ 2.87
GCN1-207ENST00000550471 CD109Q6YHK3 1445 aa32.95■■■□□ 2.87
GCN1-207ENST00000550471 CFAP43Q8NDM7 1665 aa32.95■■■□□ 2.87
GCN1-207ENST00000550471 KCNH8Q96L42 1107 aa32.95■■■□□ 2.87
GCN1-207ENST00000550471 MAGI3Q5TCQ9 1506 aa32.95■■■□□ 2.87
GCN1-207ENST00000550471 RAPGEF6Q8TEU7 1601 aa32.95■■■□□ 2.86
GCN1-207ENST00000550471 UBTFP17480 764 aaKnown RBP32.88■■■□□ 2.85
GCN1-207ENST00000550471 FHOD3Q2V2M9 1422 aa32.86■■■□□ 2.85
GCN1-207ENST00000550471 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
GCN1-207ENST00000550471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.83■■■□□ 2.85
GCN1-207ENST00000550471 HNRNPUL2Q1KMD3 747 aaKnown RBP32.83■■■□□ 2.85
GCN1-207ENST00000550471 PHLDB1Q86UU1 1377 aa32.82■■■□□ 2.84
GCN1-207ENST00000550471 NUP153P49790 1475 aaKnown RBP32.8■■■□□ 2.84
GCN1-207ENST00000550471 ARID3CA6NKF2 412 aa32.79■■■□□ 2.84
GCN1-207ENST00000550471 COL17A1Q9UMD9 1497 aaPredicted RBP32.79■■■□□ 2.84
GCN1-207ENST00000550471 PLEKHD1A6NEE1 506 aa32.76■■■□□ 2.83
GCN1-207ENST00000550471 ABCA9Q8IUA7 1624 aa32.74■■■□□ 2.83
GCN1-207ENST00000550471 FMN1Q68DA7 1419 aa32.73■■■□□ 2.83
GCN1-207ENST00000550471 ARAP3Q8WWN8 1544 aa32.68■■■□□ 2.82
GCN1-207ENST00000550471 KDM4FA0A1W2PPD8 638 aa32.64■■■□□ 2.82
GCN1-207ENST00000550471 NEO1Q92859 1461 aa32.64■■■□□ 2.82
GCN1-207ENST00000550471 ARHGAP35Q9NRY4 1499 aa32.61■■■□□ 2.81
GCN1-207ENST00000550471 EHMT2Q96KQ7 1210 aa32.59■■■□□ 2.81
GCN1-207ENST00000550471 CDK11AQ9UQ88 783 aaPredicted RBP32.58■■■□□ 2.81
GCN1-207ENST00000550471 HECW1Q76N89 1606 aa32.55■■■□□ 2.8
GCN1-207ENST00000550471 ADGRL1O94910 1474 aa32.5■■■□□ 2.79
GCN1-207ENST00000550471 CFAP74Q9C0B2 1584 aa32.46■■■□□ 2.79
GCN1-207ENST00000550471 ATP1B4Q9UN42 357 aaPredicted RBP32.46■■■□□ 2.79
GCN1-207ENST00000550471 CDK13Q14004 1512 aaKnown RBP32.44■■■□□ 2.78
GCN1-207ENST00000550471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.44■■■□□ 2.78
GCN1-207ENST00000550471 FANCAO15360 1455 aa32.4■■■□□ 2.78
GCN1-207ENST00000550471 AKNAQ7Z591 1439 aa32.38■■■□□ 2.77
GCN1-207ENST00000550471 DENND4BO75064 1496 aaPredicted RBP32.36■■■□□ 2.77
GCN1-207ENST00000550471 CLIP1P30622 1438 aa32.36■■■□□ 2.77
GCN1-207ENST00000550471 RAPGEF3O95398 923 aa32.36■■■□□ 2.77
GCN1-207ENST00000550471 PLCH2O75038 1416 aa32.34■■■□□ 2.77
GCN1-207ENST00000550471 CASKIN1Q8WXD9 1431 aa32.34■■■□□ 2.77
GCN1-207ENST00000550471 TTC37Q6PGP7 1564 aa32.33■■■□□ 2.77
GCN1-207ENST00000550471 CCDC18Q5T9S5 1454 aa32.33■■■□□ 2.77
GCN1-207ENST00000550471 TROQ12816 1431 aaPredicted RBP32.33■■■□□ 2.77
GCN1-207ENST00000550471 KIF14Q15058 1648 aa32.27■■■□□ 2.76
GCN1-207ENST00000550471 EFCAB2Q5VUJ9 269 aa32.27■■■□□ 2.76
GCN1-207ENST00000550471 FRMPD1Q5SYB0 1578 aa32.25■■■□□ 2.75
GCN1-207ENST00000550471 MAGI2Q86UL8 1455 aa32.23■■■□□ 2.75
GCN1-207ENST00000550471 FYCO1Q9BQS8 1478 aa32.23■■■□□ 2.75
GCN1-207ENST00000550471 RICTORQ6R327 1708 aa32.2■■■□□ 2.75
GCN1-207ENST00000550471 ZMYM4Q5VZL5 1548 aa32.2■■■□□ 2.74
GCN1-207ENST00000550471 MYO5CQ9NQX4 1742 aa32.2■■■□□ 2.74
GCN1-207ENST00000550471 PCF11O94913 1555 aaKnown RBP32.19■■■□□ 2.74
GCN1-207ENST00000550471 SCAPERQ9BY12 1400 aa32.17■■■□□ 2.74
GCN1-207ENST00000550471 ARHGEF40Q8TER5 1519 aa32.16■■■□□ 2.74
GCN1-207ENST00000550471 POGZQ7Z3K3 1410 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms