RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 RUSC2Q8N2Y8 1516 aa32.93■■■□□ 2.86
LETMD1-224ENST00000550446 NPM1P06748 294 aaKnown RBP eCLIP32.93■■■□□ 2.86
LETMD1-224ENST00000550446 KIAA0586Q9BVV6 1533 aa32.89■■■□□ 2.86
LETMD1-224ENST00000550446 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
LETMD1-224ENST00000550446 AEBP2Q6ZN18 517 aaPredicted RBP32.84■■■□□ 2.85
LETMD1-224ENST00000550446 CUL7Q14999 1698 aa32.81■■■□□ 2.84
LETMD1-224ENST00000550446 FAM69CQ0P6D2 419 aa32.8■■■□□ 2.84
LETMD1-224ENST00000550446 TTBK1Q5TCY1 1321 aaPredicted RBP32.77■■■□□ 2.84
LETMD1-224ENST00000550446 PTPRGP23470 1445 aa32.68■■■□□ 2.82
LETMD1-224ENST00000550446 ABCC10Q5T3U5 1492 aa32.67■■■□□ 2.82
LETMD1-224ENST00000550446 ADCY10Q96PN6 1610 aa32.66■■■□□ 2.82
LETMD1-224ENST00000550446 KIF13AQ9H1H9 1805 aa32.65■■■□□ 2.82
LETMD1-224ENST00000550446 CARMIL2Q6F5E8 1435 aa32.61■■■□□ 2.81
LETMD1-224ENST00000550446 MAPKBP1O60336 1514 aa32.61■■■□□ 2.81
LETMD1-224ENST00000550446 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
LETMD1-224ENST00000550446 IQGAP2Q13576 1575 aa32.5■■■□□ 2.79
LETMD1-224ENST00000550446 DIP2BQ9P265 1576 aa32.49■■■□□ 2.79
LETMD1-224ENST00000550446 RAPGEF2Q9Y4G8 1499 aa32.49■■■□□ 2.79
LETMD1-224ENST00000550446 ABCC2Q92887 1545 aa32.41■■■□□ 2.78
LETMD1-224ENST00000550446 DISP1Q96F81 1524 aa32.41■■■□□ 2.78
LETMD1-224ENST00000550446 UACAQ9BZF9 1416 aa32.38■■■□□ 2.77
LETMD1-224ENST00000550446 ASXL2Q76L83 1435 aa32.34■■■□□ 2.77
LETMD1-224ENST00000550446 UHRF1BP1LA0JNW5 1464 aa32.33■■■□□ 2.77
LETMD1-224ENST00000550446 UGGT2Q9NYU1 1516 aa32.31■■■□□ 2.76
LETMD1-224ENST00000550446 PLB1Q6P1J6 1458 aa32.3■■■□□ 2.76
LETMD1-224ENST00000550446 TSPOAP1O95153 1857 aa32.3■■■□□ 2.76
LETMD1-224ENST00000550446 KDM6BO15054 1643 aa32.25■■■□□ 2.75
LETMD1-224ENST00000550446 KIAA0556O60303 1618 aa32.19■■■□□ 2.74
LETMD1-224ENST00000550446 KDM5BQ9UGL1 1544 aa32.18■■■□□ 2.74
LETMD1-224ENST00000550446 GLI2P10070 1586 aa32.15■■■□□ 2.74
LETMD1-224ENST00000550446 PRXQ9BXM0 1461 aa32.13■■■□□ 2.73
LETMD1-224ENST00000550446 KDM4FA0A1W2PPD8 638 aa32.12■■■□□ 2.73
LETMD1-224ENST00000550446 EPRSP07814 1512 aaKnown RBP32.11■■■□□ 2.73
LETMD1-224ENST00000550446 GOLGA3Q08378 1498 aa32.1■■■□□ 2.73
LETMD1-224ENST00000550446 ZCCHC11Q5TAX3 1644 aaKnown RBP32.06■■■□□ 2.72
LETMD1-224ENST00000550446 P3H3Q8IVL6 736 aa32.04■■■□□ 2.72
LETMD1-224ENST00000550446 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
LETMD1-224ENST00000550446 KCNH8Q96L42 1107 aa32.04■■■□□ 2.72
LETMD1-224ENST00000550446 CTTNBP2Q8WZ74 1663 aa32.04■■■□□ 2.72
LETMD1-224ENST00000550446 FAM9AQ8IZU1 332 aaPredicted RBP32.01■■■□□ 2.71
LETMD1-224ENST00000550446 PPRC1Q5VV67 1664 aaKnown RBP32.01■■■□□ 2.71
LETMD1-224ENST00000550446 WDR7Q9Y4E6 1490 aa31.98■■■□□ 2.71
LETMD1-224ENST00000550446 COL17A1Q9UMD9 1497 aaPredicted RBP31.97■■■□□ 2.71
LETMD1-224ENST00000550446 ARID3CA6NKF2 412 aa31.94■■■□□ 2.7
LETMD1-224ENST00000550446 TEX14Q8IWB6 1497 aa31.94■■■□□ 2.7
LETMD1-224ENST00000550446 MAP3K4Q9Y6R4 1608 aa31.93■■■□□ 2.7
LETMD1-224ENST00000550446 ABCA8O94911 1581 aa31.92■■■□□ 2.7
LETMD1-224ENST00000550446 CD109Q6YHK3 1445 aa31.87■■■□□ 2.69
LETMD1-224ENST00000550446 RANGAP1P46060 587 aaPredicted RBP31.85■■■□□ 2.69
LETMD1-224ENST00000550446 ATP10BO94823 1461 aa31.77■■■□□ 2.68
LETMD1-224ENST00000550446 MAGI3Q5TCQ9 1506 aa31.75■■■□□ 2.67
LETMD1-224ENST00000550446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.75■■■□□ 2.67
LETMD1-224ENST00000550446 HNRNPUL2Q1KMD3 747 aaKnown RBP31.75■■■□□ 2.67
LETMD1-224ENST00000550446 ADGRL1O94910 1474 aa31.74■■■□□ 2.67
LETMD1-224ENST00000550446 EEA1Q15075 1411 aa31.73■■■□□ 2.67
LETMD1-224ENST00000550446 CFAP43Q8NDM7 1665 aa31.68■■■□□ 2.66
LETMD1-224ENST00000550446 SAMD9Q5K651 1589 aa31.65■■■□□ 2.66
LETMD1-224ENST00000550446 FHOD3Q2V2M9 1422 aa31.58■■■□□ 2.65
LETMD1-224ENST00000550446 EHMT2Q96KQ7 1210 aa31.57■■■□□ 2.64
LETMD1-224ENST00000550446 RAPGEF6Q8TEU7 1601 aa31.57■■■□□ 2.64
LETMD1-224ENST00000550446 PLEKHD1A6NEE1 506 aa31.52■■■□□ 2.64
LETMD1-224ENST00000550446 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
LETMD1-224ENST00000550446 ARAP3Q8WWN8 1544 aa31.51■■■□□ 2.63
LETMD1-224ENST00000550446 RAPGEF3O95398 923 aa31.5■■■□□ 2.63
LETMD1-224ENST00000550446 PHLDB1Q86UU1 1377 aa31.49■■■□□ 2.63
LETMD1-224ENST00000550446 ABCA9Q8IUA7 1624 aa31.47■■■□□ 2.63
LETMD1-224ENST00000550446 UBTFP17480 764 aaKnown RBP31.47■■■□□ 2.63
LETMD1-224ENST00000550446 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
LETMD1-224ENST00000550446 KIF21BO75037 1637 aa31.4■■■□□ 2.62
LETMD1-224ENST00000550446 NEO1Q92859 1461 aa31.38■■■□□ 2.61
LETMD1-224ENST00000550446 ATP1B4Q9UN42 357 aaPredicted RBP31.37■■■□□ 2.61
LETMD1-224ENST00000550446 EFCAB5A4FU69 1503 aa31.35■■■□□ 2.61
LETMD1-224ENST00000550446 ARID4BQ4LE39 1312 aaPredicted RBP31.29■■■□□ 2.6
LETMD1-224ENST00000550446 HECW2Q9P2P5 1572 aa31.26■■■□□ 2.59
LETMD1-224ENST00000550446 AKNAQ7Z591 1439 aa31.24■■■□□ 2.59
LETMD1-224ENST00000550446 FANCAO15360 1455 aa31.21■■■□□ 2.59
LETMD1-224ENST00000550446 DENND4BO75064 1496 aaPredicted RBP31.21■■■□□ 2.59
LETMD1-224ENST00000550446 CDK13Q14004 1512 aaKnown RBP31.21■■■□□ 2.59
LETMD1-224ENST00000550446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.21■■■□□ 2.59
LETMD1-224ENST00000550446 ILDR1Q86SU0 546 aaPredicted RBP31.18■■■□□ 2.58
LETMD1-224ENST00000550446 FMN1Q68DA7 1419 aa31.17■■■□□ 2.58
LETMD1-224ENST00000550446 FRMPD1Q5SYB0 1578 aa31.17■■■□□ 2.58
LETMD1-224ENST00000550446 ARHGAP35Q9NRY4 1499 aa31.16■■■□□ 2.58
LETMD1-224ENST00000550446 CDK11AQ9UQ88 783 aaPredicted RBP31.15■■■□□ 2.58
LETMD1-224ENST00000550446 PTPRMP28827 1452 aa31.12■■■□□ 2.57
LETMD1-224ENST00000550446 TTC37Q6PGP7 1564 aa31.12■■■□□ 2.57
LETMD1-224ENST00000550446 PLCH2O75038 1416 aa31.08■■■□□ 2.57
LETMD1-224ENST00000550446 ADAMTSL3P82987 1691 aa31.08■■■□□ 2.57
LETMD1-224ENST00000550446 EFCAB2Q5VUJ9 269 aa31.06■■■□□ 2.56
LETMD1-224ENST00000550446 CFAP74Q9C0B2 1584 aa31.05■■■□□ 2.56
LETMD1-224ENST00000550446 SCAPERQ9BY12 1400 aa31.05■■■□□ 2.56
LETMD1-224ENST00000550446 HECW1Q76N89 1606 aa31.03■■■□□ 2.56
LETMD1-224ENST00000550446 RICTORQ6R327 1708 aa31.03■■■□□ 2.56
LETMD1-224ENST00000550446 BCORL1Q5H9F3 1711 aa31.01■■■□□ 2.55
LETMD1-224ENST00000550446 YEATS2Q9ULM3 1422 aa31■■■□□ 2.55
LETMD1-224ENST00000550446 PLPPR3Q6T4P5 718 aa31■■■□□ 2.55
LETMD1-224ENST00000550446 ARHGEF40Q8TER5 1519 aa30.99■■■□□ 2.55
LETMD1-224ENST00000550446 MLECQ14165 292 aa30.98■■■□□ 2.55
LETMD1-224ENST00000550446 MADDQ8WXG6 1647 aa30.96■■■□□ 2.55
LETMD1-224ENST00000550446 ZFYVE16Q7Z3T8 1539 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms