RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
CACNB3-216ENST00000550391 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
CACNB3-216ENST00000550391 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
CACNB3-216ENST00000550391 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
CACNB3-216ENST00000550391 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
CACNB3-216ENST00000550391 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
CACNB3-216ENST00000550391 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
CACNB3-216ENST00000550391 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
CACNB3-216ENST00000550391 GRIN2AQ12879 1464 aa22.87■■□□□ 1.25
CACNB3-216ENST00000550391 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
CACNB3-216ENST00000550391 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
CACNB3-216ENST00000550391 KDM4FA0A1W2PPD8 638 aa22.83■■□□□ 1.25
CACNB3-216ENST00000550391 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
CACNB3-216ENST00000550391 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
CACNB3-216ENST00000550391 CEP170Q5SW79 1584 aa22.75■■□□□ 1.23
CACNB3-216ENST00000550391 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
CACNB3-216ENST00000550391 NUP160Q12769 1436 aa22.74■■□□□ 1.23
CACNB3-216ENST00000550391 KIAA0586Q9BVV6 1533 aa22.68■■□□□ 1.22
CACNB3-216ENST00000550391 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
CACNB3-216ENST00000550391 IQGAP2Q13576 1575 aa22.66■■□□□ 1.22
CACNB3-216ENST00000550391 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
CACNB3-216ENST00000550391 FAM69CQ0P6D2 419 aa22.62■■□□□ 1.21
CACNB3-216ENST00000550391 CLIP1P30622 1438 aa22.6■■□□□ 1.21
CACNB3-216ENST00000550391 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.2
CACNB3-216ENST00000550391 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
CACNB3-216ENST00000550391 UGGT2Q9NYU1 1516 aa22.57■■□□□ 1.2
CACNB3-216ENST00000550391 KDM6BO15054 1643 aa22.55■■□□□ 1.2
CACNB3-216ENST00000550391 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
CACNB3-216ENST00000550391 SAMD9Q5K651 1589 aa22.54■■□□□ 1.2
CACNB3-216ENST00000550391 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
CACNB3-216ENST00000550391 NPM1P06748 294 aaKnown RBP eCLIP22.51■■□□□ 1.19
CACNB3-216ENST00000550391 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
CACNB3-216ENST00000550391 DISP1Q96F81 1524 aa22.47■■□□□ 1.19
CACNB3-216ENST00000550391 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
CACNB3-216ENST00000550391 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
CACNB3-216ENST00000550391 FBXO41Q8TF61 875 aa22.44■■□□□ 1.18
CACNB3-216ENST00000550391 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
CACNB3-216ENST00000550391 DIP2BQ9P265 1576 aa22.42■■□□□ 1.18
CACNB3-216ENST00000550391 P3H3Q8IVL6 736 aa22.41■■□□□ 1.18
CACNB3-216ENST00000550391 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
CACNB3-216ENST00000550391 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
CACNB3-216ENST00000550391 HECW2Q9P2P5 1572 aa22.39■■□□□ 1.18
CACNB3-216ENST00000550391 ADGRL1O94910 1474 aa22.35■■□□□ 1.17
CACNB3-216ENST00000550391 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
CACNB3-216ENST00000550391 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
CACNB3-216ENST00000550391 TSPOAP1O95153 1857 aa22.28■■□□□ 1.16
CACNB3-216ENST00000550391 ADCY10Q96PN6 1610 aa22.28■■□□□ 1.16
CACNB3-216ENST00000550391 PCF11O94913 1555 aaKnown RBP22.24■■□□□ 1.15
CACNB3-216ENST00000550391 PTPRGP23470 1445 aa22.22■■□□□ 1.15
CACNB3-216ENST00000550391 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
CACNB3-216ENST00000550391 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
CACNB3-216ENST00000550391 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
CACNB3-216ENST00000550391 RAPGEF6Q8TEU7 1601 aa22.17■■□□□ 1.14
CACNB3-216ENST00000550391 ABCA8O94911 1581 aa22.16■■□□□ 1.14
CACNB3-216ENST00000550391 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
CACNB3-216ENST00000550391 HECW1Q76N89 1606 aa22.14■■□□□ 1.14
CACNB3-216ENST00000550391 LMTK3Q96Q04 1460 aa22.14■■□□□ 1.13
CACNB3-216ENST00000550391 LRRIQ1Q96JM4 1722 aa22.12■■□□□ 1.13
CACNB3-216ENST00000550391 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
CACNB3-216ENST00000550391 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
CACNB3-216ENST00000550391 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
CACNB3-216ENST00000550391 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
CACNB3-216ENST00000550391 APLP2Q06481 763 aa22.07■■□□□ 1.12
CACNB3-216ENST00000550391 CFAP43Q8NDM7 1665 aa22.07■■□□□ 1.12
CACNB3-216ENST00000550391 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
CACNB3-216ENST00000550391 EPRSP07814 1512 aaKnown RBP22.06■■□□□ 1.12
CACNB3-216ENST00000550391 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
CACNB3-216ENST00000550391 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
CACNB3-216ENST00000550391 CCDC18Q5T9S5 1454 aa22.05■■□□□ 1.12
CACNB3-216ENST00000550391 GLI2P10070 1586 aa22.01■■□□□ 1.11
CACNB3-216ENST00000550391 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
CACNB3-216ENST00000550391 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
CACNB3-216ENST00000550391 SOCS7O14512 581 aa22■■□□□ 1.11
CACNB3-216ENST00000550391 ATP10BO94823 1461 aa21.97■■□□□ 1.11
CACNB3-216ENST00000550391 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
CACNB3-216ENST00000550391 ARID3CA6NKF2 412 aa21.95■■□□□ 1.1
CACNB3-216ENST00000550391 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
CACNB3-216ENST00000550391 LRRC9Q6ZRR7 1453 aa21.95■■□□□ 1.1
CACNB3-216ENST00000550391 KDM5BQ9UGL1 1544 aa21.95■■□□□ 1.1
CACNB3-216ENST00000550391 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
CACNB3-216ENST00000550391 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
CACNB3-216ENST00000550391 ZCCHC11Q5TAX3 1644 aaKnown RBP21.92■■□□□ 1.1
CACNB3-216ENST00000550391 MAGI3Q5TCQ9 1506 aa21.91■■□□□ 1.1
CACNB3-216ENST00000550391 TEX14Q8IWB6 1497 aa21.91■■□□□ 1.1
CACNB3-216ENST00000550391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.89■■□□□ 1.09
CACNB3-216ENST00000550391 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.09
CACNB3-216ENST00000550391 EHBP1L1Q8N3D4 1523 aa21.89■■□□□ 1.09
CACNB3-216ENST00000550391 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
CACNB3-216ENST00000550391 CDK11AQ9UQ88 783 aaPredicted RBP21.86■■□□□ 1.09
CACNB3-216ENST00000550391 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
CACNB3-216ENST00000550391 TROQ12816 1431 aaPredicted RBP21.83■■□□□ 1.09
CACNB3-216ENST00000550391 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
CACNB3-216ENST00000550391 ILDR2Q71H61 639 aa21.82■■□□□ 1.08
CACNB3-216ENST00000550391 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
CACNB3-216ENST00000550391 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
CACNB3-216ENST00000550391 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
CACNB3-216ENST00000550391 KIF14Q15058 1648 aa21.75■■□□□ 1.07
CACNB3-216ENST00000550391 WDR7Q9Y4E6 1490 aa21.73■■□□□ 1.07
CACNB3-216ENST00000550391 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
CACNB3-216ENST00000550391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms