RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
RNF41-208ENST00000550379 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
RNF41-208ENST00000550379 IQGAP2Q13576 1575 aa12.42□□□□□ -0.42
RNF41-208ENST00000550379 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
RNF41-208ENST00000550379 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
RNF41-208ENST00000550379 SHROOM2Q13796 1616 aa12.4□□□□□ -0.42
RNF41-208ENST00000550379 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
RNF41-208ENST00000550379 SAMD9Q5K651 1589 aa12.37□□□□□ -0.43
RNF41-208ENST00000550379 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
RNF41-208ENST00000550379 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
RNF41-208ENST00000550379 FBLN2P98095 1184 aa12.35□□□□□ -0.43
RNF41-208ENST00000550379 CLIP1P30622 1438 aa12.35□□□□□ -0.43
RNF41-208ENST00000550379 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
RNF41-208ENST00000550379 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
RNF41-208ENST00000550379 CARMIL2Q6F5E8 1435 aa12.31□□□□□ -0.44
RNF41-208ENST00000550379 KIAA0556O60303 1618 aa12.28□□□□□ -0.44
RNF41-208ENST00000550379 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
RNF41-208ENST00000550379 ARAP1Q96P48 1450 aa12.27□□□□□ -0.44
RNF41-208ENST00000550379 PRG4Q92954 1404 aaPredicted RBP12.26□□□□□ -0.45
RNF41-208ENST00000550379 VPS8Q8N3P4 1428 aa12.25□□□□□ -0.45
RNF41-208ENST00000550379 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
RNF41-208ENST00000550379 CASKIN1Q8WXD9 1431 aa12.21□□□□□ -0.45
RNF41-208ENST00000550379 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
RNF41-208ENST00000550379 FYCO1Q9BQS8 1478 aa12.19□□□□□ -0.46
RNF41-208ENST00000550379 PTPRGP23470 1445 aa12.19□□□□□ -0.46
RNF41-208ENST00000550379 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
RNF41-208ENST00000550379 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
RNF41-208ENST00000550379 ABCA8O94911 1581 aa12.18□□□□□ -0.46
RNF41-208ENST00000550379 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
RNF41-208ENST00000550379 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
RNF41-208ENST00000550379 UACAQ9BZF9 1416 aa12.14□□□□□ -0.47
RNF41-208ENST00000550379 RAPGEF6Q8TEU7 1601 aa12.12□□□□□ -0.47
RNF41-208ENST00000550379 CCDC18Q5T9S5 1454 aa12.12□□□□□ -0.47
RNF41-208ENST00000550379 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
RNF41-208ENST00000550379 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
RNF41-208ENST00000550379 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
RNF41-208ENST00000550379 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
RNF41-208ENST00000550379 KDM5BQ9UGL1 1544 aa12.1□□□□□ -0.47
RNF41-208ENST00000550379 PLB1Q6P1J6 1458 aa12.09□□□□□ -0.47
RNF41-208ENST00000550379 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
RNF41-208ENST00000550379 EPRSP07814 1512 aaKnown RBP12.09□□□□□ -0.47
RNF41-208ENST00000550379 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
RNF41-208ENST00000550379 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
RNF41-208ENST00000550379 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
RNF41-208ENST00000550379 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
RNF41-208ENST00000550379 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
RNF41-208ENST00000550379 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
RNF41-208ENST00000550379 ATP10BO94823 1461 aa12.06□□□□□ -0.48
RNF41-208ENST00000550379 CFAP43Q8NDM7 1665 aa12.05□□□□□ -0.48
RNF41-208ENST00000550379 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
RNF41-208ENST00000550379 ADCY10Q96PN6 1610 aa12.03□□□□□ -0.48
RNF41-208ENST00000550379 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
RNF41-208ENST00000550379 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.48
RNF41-208ENST00000550379 APLP2Q06481 763 aa12.02□□□□□ -0.49
RNF41-208ENST00000550379 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
RNF41-208ENST00000550379 EHBP1L1Q8N3D4 1523 aa11.99□□□□□ -0.49
RNF41-208ENST00000550379 MAPKBP1O60336 1514 aa11.98□□□□□ -0.49
RNF41-208ENST00000550379 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
RNF41-208ENST00000550379 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
RNF41-208ENST00000550379 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.5
RNF41-208ENST00000550379 KANK4Q5T7N3 995 aaPredicted RBP11.95□□□□□ -0.5
RNF41-208ENST00000550379 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
RNF41-208ENST00000550379 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
RNF41-208ENST00000550379 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
RNF41-208ENST00000550379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF41-208ENST00000550379 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF41-208ENST00000550379 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
RNF41-208ENST00000550379 ARAP3Q8WWN8 1544 aa11.92□□□□□ -0.5
RNF41-208ENST00000550379 SUPT6HQ7KZ85 1726 aaKnown RBP11.91□□□□□ -0.5
RNF41-208ENST00000550379 ABCC10Q5T3U5 1492 aa11.91□□□□□ -0.5
RNF41-208ENST00000550379 ASXL2Q76L83 1435 aa11.91□□□□□ -0.5
RNF41-208ENST00000550379 MIA2Q96PC5 1412 aa11.91□□□□□ -0.5
RNF41-208ENST00000550379 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
RNF41-208ENST00000550379 GLI2P10070 1586 aa11.89□□□□□ -0.51
RNF41-208ENST00000550379 RRBP1Q9P2E9 1410 aaKnown RBP11.89□□□□□ -0.51
RNF41-208ENST00000550379 ATP1B4Q9UN42 357 aaPredicted RBP11.89□□□□□ -0.51
RNF41-208ENST00000550379 KIF14Q15058 1648 aa11.88□□□□□ -0.51
RNF41-208ENST00000550379 ABCA9Q8IUA7 1624 aa11.88□□□□□ -0.51
RNF41-208ENST00000550379 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
RNF41-208ENST00000550379 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
RNF41-208ENST00000550379 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
RNF41-208ENST00000550379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF41-208ENST00000550379 PLCH2O75038 1416 aa11.85□□□□□ -0.51
RNF41-208ENST00000550379 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
RNF41-208ENST00000550379 PHLDB1Q86UU1 1377 aa11.84□□□□□ -0.51
RNF41-208ENST00000550379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
RNF41-208ENST00000550379 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
RNF41-208ENST00000550379 ITSN2Q9NZM3 1697 aa11.83□□□□□ -0.52
RNF41-208ENST00000550379 FGD6Q6ZV73 1430 aa11.83□□□□□ -0.52
RNF41-208ENST00000550379 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
RNF41-208ENST00000550379 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
RNF41-208ENST00000550379 KIAA1107Q9UPP5 1409 aa11.81□□□□□ -0.52
RNF41-208ENST00000550379 TRIM26Q12899 539 aaPredicted RBP11.81□□□□□ -0.52
RNF41-208ENST00000550379 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
RNF41-208ENST00000550379 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
RNF41-208ENST00000550379 DIP2BQ9P265 1576 aa11.79□□□□□ -0.52
RNF41-208ENST00000550379 MAP3K4Q9Y6R4 1608 aa11.79□□□□□ -0.52
RNF41-208ENST00000550379 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
RNF41-208ENST00000550379 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
RNF41-208ENST00000550379 TTC37Q6PGP7 1564 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms