RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 NUP160Q12769 1436 aa14.29□□□□□ -0.12
ATXN2-220ENST00000550236 RUSC2Q8N2Y8 1516 aa14.27□□□□□ -0.12
ATXN2-220ENST00000550236 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
ATXN2-220ENST00000550236 CUL7Q14999 1698 aa14.24□□□□□ -0.13
ATXN2-220ENST00000550236 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
ATXN2-220ENST00000550236 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
ATXN2-220ENST00000550236 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
ATXN2-220ENST00000550236 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.13
ATXN2-220ENST00000550236 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
ATXN2-220ENST00000550236 FOXD1Q16676 465 aa14.15□□□□□ -0.14
ATXN2-220ENST00000550236 KIAA0586Q9BVV6 1533 aa14.14□□□□□ -0.15
ATXN2-220ENST00000550236 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
ATXN2-220ENST00000550236 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
ATXN2-220ENST00000550236 IQGAP2Q13576 1575 aa14.07□□□□□ -0.16
ATXN2-220ENST00000550236 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
ATXN2-220ENST00000550236 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
ATXN2-220ENST00000550236 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.16
ATXN2-220ENST00000550236 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
ATXN2-220ENST00000550236 PTPRGP23470 1445 aa14.01□□□□□ -0.17
ATXN2-220ENST00000550236 CARMIL2Q6F5E8 1435 aa14□□□□□ -0.17
ATXN2-220ENST00000550236 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
ATXN2-220ENST00000550236 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
ATXN2-220ENST00000550236 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
ATXN2-220ENST00000550236 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
ATXN2-220ENST00000550236 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
ATXN2-220ENST00000550236 TNIKQ9UKE5 1360 aa13.97□□□□□ -0.17
ATXN2-220ENST00000550236 P3H3Q8IVL6 736 aa13.96□□□□□ -0.17
ATXN2-220ENST00000550236 UGGT2Q9NYU1 1516 aa13.95□□□□□ -0.18
ATXN2-220ENST00000550236 KIAA0556O60303 1618 aa13.94□□□□□ -0.18
ATXN2-220ENST00000550236 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
ATXN2-220ENST00000550236 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
ATXN2-220ENST00000550236 UACAQ9BZF9 1416 aa13.89□□□□□ -0.19
ATXN2-220ENST00000550236 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
ATXN2-220ENST00000550236 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
ATXN2-220ENST00000550236 EEA1Q15075 1411 aa13.87□□□□□ -0.19
ATXN2-220ENST00000550236 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
ATXN2-220ENST00000550236 ABCC2Q92887 1545 aa13.86□□□□□ -0.19
ATXN2-220ENST00000550236 GOLGA3Q08378 1498 aa13.86□□□□□ -0.19
ATXN2-220ENST00000550236 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
ATXN2-220ENST00000550236 PLB1Q6P1J6 1458 aa13.86□□□□□ -0.19
ATXN2-220ENST00000550236 ZCCHC11Q5TAX3 1644 aaKnown RBP13.85□□□□□ -0.19
ATXN2-220ENST00000550236 ASXL2Q76L83 1435 aa13.83□□□□□ -0.2
ATXN2-220ENST00000550236 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
ATXN2-220ENST00000550236 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
ATXN2-220ENST00000550236 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
ATXN2-220ENST00000550236 KIF21BO75037 1637 aa13.81□□□□□ -0.2
ATXN2-220ENST00000550236 KCNH8Q96L42 1107 aa13.79□□□□□ -0.2
ATXN2-220ENST00000550236 KDM5BQ9UGL1 1544 aa13.79□□□□□ -0.2
ATXN2-220ENST00000550236 ABCA8O94911 1581 aa13.79□□□□□ -0.2
ATXN2-220ENST00000550236 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
ATXN2-220ENST00000550236 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
ATXN2-220ENST00000550236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
ATXN2-220ENST00000550236 ADRA2BP18089 450 aa13.75□□□□□ -0.21
ATXN2-220ENST00000550236 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
ATXN2-220ENST00000550236 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
ATXN2-220ENST00000550236 EPRSP07814 1512 aaKnown RBP13.73□□□□□ -0.21
ATXN2-220ENST00000550236 KDM6BO15054 1643 aa13.72□□□□□ -0.21
ATXN2-220ENST00000550236 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
ATXN2-220ENST00000550236 ATP1B4Q9UN42 357 aaPredicted RBP13.71□□□□□ -0.21
ATXN2-220ENST00000550236 GLI2P10070 1586 aa13.71□□□□□ -0.22
ATXN2-220ENST00000550236 ATP10BO94823 1461 aa13.7□□□□□ -0.22
ATXN2-220ENST00000550236 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
ATXN2-220ENST00000550236 MAP3K4Q9Y6R4 1608 aa13.69□□□□□ -0.22
ATXN2-220ENST00000550236 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
ATXN2-220ENST00000550236 NUP153P49790 1475 aaKnown RBP13.64□□□□□ -0.23
ATXN2-220ENST00000550236 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
ATXN2-220ENST00000550236 CFAP43Q8NDM7 1665 aa13.63□□□□□ -0.23
ATXN2-220ENST00000550236 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
ATXN2-220ENST00000550236 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
ATXN2-220ENST00000550236 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
ATXN2-220ENST00000550236 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
ATXN2-220ENST00000550236 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
ATXN2-220ENST00000550236 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
ATXN2-220ENST00000550236 ABCA9Q8IUA7 1624 aa13.55□□□□□ -0.24
ATXN2-220ENST00000550236 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
ATXN2-220ENST00000550236 FMN1Q68DA7 1419 aa13.54□□□□□ -0.24
ATXN2-220ENST00000550236 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
ATXN2-220ENST00000550236 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
ATXN2-220ENST00000550236 PCF11O94913 1555 aaKnown RBP13.5□□□□□ -0.25
ATXN2-220ENST00000550236 CLIP1P30622 1438 aa13.5□□□□□ -0.25
ATXN2-220ENST00000550236 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
ATXN2-220ENST00000550236 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
ATXN2-220ENST00000550236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATXN2-220ENST00000550236 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
ATXN2-220ENST00000550236 KIF14Q15058 1648 aa13.46□□□□□ -0.25
ATXN2-220ENST00000550236 CDK11AQ9UQ88 783 aaPredicted RBP13.45□□□□□ -0.26
ATXN2-220ENST00000550236 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
ATXN2-220ENST00000550236 CASKIN1Q8WXD9 1431 aa13.43□□□□□ -0.26
ATXN2-220ENST00000550236 MYO5CQ9NQX4 1742 aa13.43□□□□□ -0.26
ATXN2-220ENST00000550236 FANCAO15360 1455 aa13.42□□□□□ -0.26
ATXN2-220ENST00000550236 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
ATXN2-220ENST00000550236 NEO1Q92859 1461 aa13.42□□□□□ -0.26
ATXN2-220ENST00000550236 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
ATXN2-220ENST00000550236 AKNAQ7Z591 1439 aa13.41□□□□□ -0.26
ATXN2-220ENST00000550236 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
ATXN2-220ENST00000550236 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
ATXN2-220ENST00000550236 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
ATXN2-220ENST00000550236 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
ATXN2-220ENST00000550236 FYCO1Q9BQS8 1478 aa13.38□□□□□ -0.27
ATXN2-220ENST00000550236 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms