RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
GPN3-207ENST00000550228 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
GPN3-207ENST00000550228 NUP160Q12769 1436 aa13.12□□□□□ -0.31
GPN3-207ENST00000550228 IQGAP2Q13576 1575 aa13.11□□□□□ -0.31
GPN3-207ENST00000550228 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
GPN3-207ENST00000550228 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.31
GPN3-207ENST00000550228 CLIP1P30622 1438 aa13.06□□□□□ -0.32
GPN3-207ENST00000550228 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
GPN3-207ENST00000550228 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
GPN3-207ENST00000550228 UGGT2Q9NYU1 1516 aa13.02□□□□□ -0.33
GPN3-207ENST00000550228 ARHGAP35Q9NRY4 1499 aa13.01□□□□□ -0.33
GPN3-207ENST00000550228 SAMD9Q5K651 1589 aa13□□□□□ -0.33
GPN3-207ENST00000550228 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
GPN3-207ENST00000550228 P3H3Q8IVL6 736 aa13□□□□□ -0.33
GPN3-207ENST00000550228 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
GPN3-207ENST00000550228 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
GPN3-207ENST00000550228 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
GPN3-207ENST00000550228 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
GPN3-207ENST00000550228 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
GPN3-207ENST00000550228 DISP1Q96F81 1524 aa12.97□□□□□ -0.33
GPN3-207ENST00000550228 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.33
GPN3-207ENST00000550228 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
GPN3-207ENST00000550228 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
GPN3-207ENST00000550228 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
GPN3-207ENST00000550228 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
GPN3-207ENST00000550228 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
GPN3-207ENST00000550228 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
GPN3-207ENST00000550228 ARHGEF11O15085 1522 aa12.84□□□□□ -0.35
GPN3-207ENST00000550228 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
GPN3-207ENST00000550228 PTPRGP23470 1445 aa12.84□□□□□ -0.35
GPN3-207ENST00000550228 RIMBP3CA6NJZ7 1639 aa12.83□□□□□ -0.36
GPN3-207ENST00000550228 RIMBP3BA6NNM3 1639 aa12.83□□□□□ -0.36
GPN3-207ENST00000550228 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
GPN3-207ENST00000550228 RIMBP3Q9UFD9 1639 aa12.83□□□□□ -0.36
GPN3-207ENST00000550228 HECW1Q76N89 1606 aa12.81□□□□□ -0.36
GPN3-207ENST00000550228 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
GPN3-207ENST00000550228 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
GPN3-207ENST00000550228 FYCO1Q9BQS8 1478 aa12.81□□□□□ -0.36
GPN3-207ENST00000550228 ABCA8O94911 1581 aa12.8□□□□□ -0.36
GPN3-207ENST00000550228 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
GPN3-207ENST00000550228 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
GPN3-207ENST00000550228 APLP2Q06481 763 aa12.77□□□□□ -0.37
GPN3-207ENST00000550228 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
GPN3-207ENST00000550228 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
GPN3-207ENST00000550228 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
GPN3-207ENST00000550228 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
GPN3-207ENST00000550228 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
GPN3-207ENST00000550228 TIAM1Q13009 1591 aa12.74□□□□□ -0.37
GPN3-207ENST00000550228 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
GPN3-207ENST00000550228 EPRSP07814 1512 aaKnown RBP12.73□□□□□ -0.37
GPN3-207ENST00000550228 CCDC18Q5T9S5 1454 aa12.73□□□□□ -0.37
GPN3-207ENST00000550228 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
GPN3-207ENST00000550228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
GPN3-207ENST00000550228 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
GPN3-207ENST00000550228 UHRF1BP1LA0JNW5 1464 aa12.71□□□□□ -0.38
GPN3-207ENST00000550228 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
GPN3-207ENST00000550228 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
GPN3-207ENST00000550228 MAP3K1Q13233 1512 aa12.69□□□□□ -0.38
GPN3-207ENST00000550228 ATP10BO94823 1461 aa12.68□□□□□ -0.38
GPN3-207ENST00000550228 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
GPN3-207ENST00000550228 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
GPN3-207ENST00000550228 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
GPN3-207ENST00000550228 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
GPN3-207ENST00000550228 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
GPN3-207ENST00000550228 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
GPN3-207ENST00000550228 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
GPN3-207ENST00000550228 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
GPN3-207ENST00000550228 CDK11AQ9UQ88 783 aaPredicted RBP12.62□□□□□ -0.39
GPN3-207ENST00000550228 SUPT6HQ7KZ85 1726 aaKnown RBP12.61□□□□□ -0.39
GPN3-207ENST00000550228 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
GPN3-207ENST00000550228 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
GPN3-207ENST00000550228 KIF14Q15058 1648 aa12.59□□□□□ -0.39
GPN3-207ENST00000550228 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
GPN3-207ENST00000550228 NCOA2Q15596 1464 aa12.57□□□□□ -0.4
GPN3-207ENST00000550228 WDR7Q9Y4E6 1490 aa12.57□□□□□ -0.4
GPN3-207ENST00000550228 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
GPN3-207ENST00000550228 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
GPN3-207ENST00000550228 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
GPN3-207ENST00000550228 PHLDB1Q86UU1 1377 aa12.53□□□□□ -0.4
GPN3-207ENST00000550228 CCNB3Q8WWL7 1395 aa12.51□□□□□ -0.41
GPN3-207ENST00000550228 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
GPN3-207ENST00000550228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.51□□□□□ -0.41
GPN3-207ENST00000550228 ITSN2Q9NZM3 1697 aa12.51□□□□□ -0.41
GPN3-207ENST00000550228 MYOM3Q5VTT5 1437 aa12.5□□□□□ -0.41
GPN3-207ENST00000550228 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
GPN3-207ENST00000550228 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
GPN3-207ENST00000550228 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
GPN3-207ENST00000550228 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
GPN3-207ENST00000550228 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
GPN3-207ENST00000550228 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.41
GPN3-207ENST00000550228 CDC42BPBQ9Y5S2 1711 aa12.46□□□□□ -0.41
GPN3-207ENST00000550228 DIP2BQ9P265 1576 aa12.46□□□□□ -0.42
GPN3-207ENST00000550228 PTPN23Q9H3S7 1636 aa12.45□□□□□ -0.42
GPN3-207ENST00000550228 RRBP1Q9P2E9 1410 aaKnown RBP12.45□□□□□ -0.42
GPN3-207ENST00000550228 ARHGAP5Q13017 1502 aa12.44□□□□□ -0.42
GPN3-207ENST00000550228 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
GPN3-207ENST00000550228 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
GPN3-207ENST00000550228 CFDP1Q9UEE9 299 aaPredicted RBP12.43□□□□□ -0.42
GPN3-207ENST00000550228 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
GPN3-207ENST00000550228 KIF13AQ9H1H9 1805 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms