RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
CHMP1A-208ENST00000550102 PRG4Q92954 1404 aaPredicted RBP29.26■■■□□ 2.27
CHMP1A-208ENST00000550102 RAPGEF2Q9Y4G8 1499 aa29.23■■■□□ 2.27
CHMP1A-208ENST00000550102 JPH4Q96JJ6 628 aa29.21■■■□□ 2.27
CHMP1A-208ENST00000550102 IQGAP2Q13576 1575 aa29.2■■■□□ 2.26
CHMP1A-208ENST00000550102 CTTNBP2Q8WZ74 1663 aa29.15■■■□□ 2.26
CHMP1A-208ENST00000550102 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
CHMP1A-208ENST00000550102 EEA1Q15075 1411 aa29.03■■■□□ 2.24
CHMP1A-208ENST00000550102 CARMIL2Q6F5E8 1435 aa29■■■□□ 2.23
CHMP1A-208ENST00000550102 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
CHMP1A-208ENST00000550102 ADCY10Q96PN6 1610 aa28.95■■■□□ 2.23
CHMP1A-208ENST00000550102 DISP1Q96F81 1524 aa28.93■■■□□ 2.22
CHMP1A-208ENST00000550102 KIAA0556O60303 1618 aa28.92■■■□□ 2.22
CHMP1A-208ENST00000550102 TRHP20396 242 aaPredicted RBP28.92■■■□□ 2.22
CHMP1A-208ENST00000550102 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
CHMP1A-208ENST00000550102 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
CHMP1A-208ENST00000550102 TNIKQ9UKE5 1360 aa28.88■■■□□ 2.21
CHMP1A-208ENST00000550102 PTPRGP23470 1445 aa28.86■■■□□ 2.21
CHMP1A-208ENST00000550102 KIF21BO75037 1637 aa28.83■■■□□ 2.21
CHMP1A-208ENST00000550102 GOLGA3Q08378 1498 aa28.81■■■□□ 2.2
CHMP1A-208ENST00000550102 MAPKBP1O60336 1514 aa28.79■■■□□ 2.2
CHMP1A-208ENST00000550102 KIF13AQ9H1H9 1805 aa28.78■■■□□ 2.2
CHMP1A-208ENST00000550102 FAM9AQ8IZU1 332 aaPredicted RBP28.74■■■□□ 2.19
CHMP1A-208ENST00000550102 TTBK1Q5TCY1 1321 aaPredicted RBP28.73■■■□□ 2.19
CHMP1A-208ENST00000550102 UHRF1BP1LA0JNW5 1464 aa28.72■■■□□ 2.19
CHMP1A-208ENST00000550102 NPM1P06748 294 aaKnown RBP eCLIP28.72■■■□□ 2.19
CHMP1A-208ENST00000550102 ABCC2Q92887 1545 aa28.72■■■□□ 2.19
CHMP1A-208ENST00000550102 UACAQ9BZF9 1416 aa28.69■■■□□ 2.18
CHMP1A-208ENST00000550102 SAMD9Q5K651 1589 aa28.67■■■□□ 2.18
CHMP1A-208ENST00000550102 DIP2BQ9P265 1576 aa28.65■■■□□ 2.18
CHMP1A-208ENST00000550102 ABCC10Q5T3U5 1492 aa28.61■■■□□ 2.17
CHMP1A-208ENST00000550102 ZCCHC11Q5TAX3 1644 aaKnown RBP28.6■■■□□ 2.17
CHMP1A-208ENST00000550102 ABCA8O94911 1581 aa28.58■■■□□ 2.17
CHMP1A-208ENST00000550102 KDM5BQ9UGL1 1544 aa28.58■■■□□ 2.17
CHMP1A-208ENST00000550102 PLB1Q6P1J6 1458 aa28.57■■■□□ 2.16
CHMP1A-208ENST00000550102 EFCAB5A4FU69 1503 aa28.52■■■□□ 2.16
CHMP1A-208ENST00000550102 ASXL2Q76L83 1435 aa28.51■■■□□ 2.15
CHMP1A-208ENST00000550102 FAM69CQ0P6D2 419 aa28.46■■■□□ 2.15
CHMP1A-208ENST00000550102 TSPOAP1O95153 1857 aa28.44■■■□□ 2.14
CHMP1A-208ENST00000550102 P3H3Q8IVL6 736 aa28.44■■■□□ 2.14
CHMP1A-208ENST00000550102 RAPGEF6Q8TEU7 1601 aa28.43■■■□□ 2.14
CHMP1A-208ENST00000550102 GLI2P10070 1586 aa28.42■■■□□ 2.14
CHMP1A-208ENST00000550102 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
CHMP1A-208ENST00000550102 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
CHMP1A-208ENST00000550102 RANGAP1P46060 587 aaPredicted RBP28.39■■■□□ 2.14
CHMP1A-208ENST00000550102 WDR7Q9Y4E6 1490 aa28.38■■■□□ 2.13
CHMP1A-208ENST00000550102 EHMT2Q96KQ7 1210 aa28.37■■■□□ 2.13
CHMP1A-208ENST00000550102 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
CHMP1A-208ENST00000550102 MAP3K4Q9Y6R4 1608 aa28.33■■■□□ 2.13
CHMP1A-208ENST00000550102 PPRC1Q5VV67 1664 aaKnown RBP28.32■■■□□ 2.12
CHMP1A-208ENST00000550102 ATP10BO94823 1461 aa28.26■■■□□ 2.11
CHMP1A-208ENST00000550102 NUP153P49790 1475 aaKnown RBP28.26■■■□□ 2.11
CHMP1A-208ENST00000550102 ARHGAP35Q9NRY4 1499 aa28.25■■■□□ 2.11
CHMP1A-208ENST00000550102 CFAP43Q8NDM7 1665 aa28.25■■■□□ 2.11
CHMP1A-208ENST00000550102 KDM6BO15054 1643 aa28.25■■■□□ 2.11
CHMP1A-208ENST00000550102 ARID3CA6NKF2 412 aa28.19■■■□□ 2.1
CHMP1A-208ENST00000550102 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
CHMP1A-208ENST00000550102 TEX14Q8IWB6 1497 aa28.17■■■□□ 2.1
CHMP1A-208ENST00000550102 HECW1Q76N89 1606 aa28.17■■■□□ 2.1
CHMP1A-208ENST00000550102 ABCA9Q8IUA7 1624 aa28.12■■■□□ 2.09
CHMP1A-208ENST00000550102 KCNH8Q96L42 1107 aa28.08■■■□□ 2.09
CHMP1A-208ENST00000550102 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.08
CHMP1A-208ENST00000550102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.07■■■□□ 2.08
CHMP1A-208ENST00000550102 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
CHMP1A-208ENST00000550102 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
CHMP1A-208ENST00000550102 CDK13Q14004 1512 aaKnown RBP28.07■■■□□ 2.08
CHMP1A-208ENST00000550102 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
CHMP1A-208ENST00000550102 LRRIQ1Q96JM4 1722 aa28.02■■■□□ 2.08
CHMP1A-208ENST00000550102 CLIP1P30622 1438 aa28.01■■■□□ 2.08
CHMP1A-208ENST00000550102 PLEKHD1A6NEE1 506 aa27.94■■■□□ 2.06
CHMP1A-208ENST00000550102 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
CHMP1A-208ENST00000550102 TTC37Q6PGP7 1564 aa27.92■■■□□ 2.06
CHMP1A-208ENST00000550102 FYCO1Q9BQS8 1478 aa27.92■■■□□ 2.06
CHMP1A-208ENST00000550102 COL17A1Q9UMD9 1497 aaPredicted RBP27.92■■■□□ 2.06
CHMP1A-208ENST00000550102 ATP1B4Q9UN42 357 aaPredicted RBP27.91■■■□□ 2.06
CHMP1A-208ENST00000550102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.9■■■□□ 2.06
CHMP1A-208ENST00000550102 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.06
CHMP1A-208ENST00000550102 CFAP74Q9C0B2 1584 aa27.88■■■□□ 2.05
CHMP1A-208ENST00000550102 CEP162Q5TB80 1403 aa27.86■■■□□ 2.05
CHMP1A-208ENST00000550102 KIF14Q15058 1648 aa27.86■■■□□ 2.05
CHMP1A-208ENST00000550102 NEO1Q92859 1461 aa27.85■■■□□ 2.05
CHMP1A-208ENST00000550102 ARAP3Q8WWN8 1544 aa27.84■■■□□ 2.05
CHMP1A-208ENST00000550102 MYO5CQ9NQX4 1742 aa27.83■■■□□ 2.05
CHMP1A-208ENST00000550102 CDK11AQ9UQ88 783 aaPredicted RBP27.82■■■□□ 2.04
CHMP1A-208ENST00000550102 PHLDB1Q86UU1 1377 aa27.82■■■□□ 2.04
CHMP1A-208ENST00000550102 TROQ12816 1431 aaPredicted RBP27.8■■■□□ 2.04
CHMP1A-208ENST00000550102 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
CHMP1A-208ENST00000550102 FANCAO15360 1455 aa27.76■■■□□ 2.03
CHMP1A-208ENST00000550102 FRMPD1Q5SYB0 1578 aa27.72■■■□□ 2.03
CHMP1A-208ENST00000550102 RICTORQ6R327 1708 aa27.7■■■□□ 2.03
CHMP1A-208ENST00000550102 PLCH2O75038 1416 aa27.67■■■□□ 2.02
CHMP1A-208ENST00000550102 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
CHMP1A-208ENST00000550102 PREX2Q70Z35 1606 aa27.66■■■□□ 2.02
CHMP1A-208ENST00000550102 AKNAQ7Z591 1439 aa27.66■■■□□ 2.02
CHMP1A-208ENST00000550102 CDC42BPBQ9Y5S2 1711 aa27.63■■■□□ 2.01
CHMP1A-208ENST00000550102 DENND4BO75064 1496 aaPredicted RBP27.62■■■□□ 2.01
CHMP1A-208ENST00000550102 ARHGAP5Q13017 1502 aa27.62■■■□□ 2.01
CHMP1A-208ENST00000550102 CDC42BPAQ5VT25 1732 aa27.61■■■□□ 2.01
CHMP1A-208ENST00000550102 ADGRL1O94910 1474 aa27.6■■■□□ 2.01
CHMP1A-208ENST00000550102 ZMYM4Q5VZL5 1548 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms