RNA–Protein interactions for RNA: ENST00000549996.5

NR1H4-207, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 1 (best) BASIC

Gene NR1H4, Length 1,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-207ENST00000549996 JPH4Q96JJ6 628 aa17.67■□□□□ 0.42
NR1H4-207ENST00000549996 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
NR1H4-207ENST00000549996 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
NR1H4-207ENST00000549996 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
NR1H4-207ENST00000549996 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
NR1H4-207ENST00000549996 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
NR1H4-207ENST00000549996 FAM9AQ8IZU1 332 aaPredicted RBP17.55■□□□□ 0.4
NR1H4-207ENST00000549996 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
NR1H4-207ENST00000549996 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
NR1H4-207ENST00000549996 EEA1Q15075 1411 aa17.52■□□□□ 0.4
NR1H4-207ENST00000549996 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
NR1H4-207ENST00000549996 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
NR1H4-207ENST00000549996 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
NR1H4-207ENST00000549996 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
NR1H4-207ENST00000549996 PTPRGP23470 1445 aa17.42■□□□□ 0.38
NR1H4-207ENST00000549996 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
NR1H4-207ENST00000549996 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
NR1H4-207ENST00000549996 DISP1Q96F81 1524 aa17.4■□□□□ 0.38
NR1H4-207ENST00000549996 NPM1P06748 294 aaKnown RBP eCLIP17.38■□□□□ 0.37
NR1H4-207ENST00000549996 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
NR1H4-207ENST00000549996 CTTNBP2Q8WZ74 1663 aa17.36■□□□□ 0.37
NR1H4-207ENST00000549996 GOLGA3Q08378 1498 aa17.34■□□□□ 0.37
NR1H4-207ENST00000549996 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
NR1H4-207ENST00000549996 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
NR1H4-207ENST00000549996 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
NR1H4-207ENST00000549996 KIF21BO75037 1637 aa17.3■□□□□ 0.36
NR1H4-207ENST00000549996 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
NR1H4-207ENST00000549996 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
NR1H4-207ENST00000549996 UACAQ9BZF9 1416 aa17.28■□□□□ 0.36
NR1H4-207ENST00000549996 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
NR1H4-207ENST00000549996 UHRF1BP1LA0JNW5 1464 aa17.23■□□□□ 0.35
NR1H4-207ENST00000549996 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
NR1H4-207ENST00000549996 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
NR1H4-207ENST00000549996 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
NR1H4-207ENST00000549996 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
NR1H4-207ENST00000549996 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
NR1H4-207ENST00000549996 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
NR1H4-207ENST00000549996 ASXL2Q76L83 1435 aa17.16■□□□□ 0.34
NR1H4-207ENST00000549996 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
NR1H4-207ENST00000549996 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
NR1H4-207ENST00000549996 ABCA8O94911 1581 aa17.14■□□□□ 0.33
NR1H4-207ENST00000549996 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
NR1H4-207ENST00000549996 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
NR1H4-207ENST00000549996 ZCCHC11Q5TAX3 1644 aaKnown RBP17.1■□□□□ 0.33
NR1H4-207ENST00000549996 KIF13AQ9H1H9 1805 aa17.08■□□□□ 0.32
NR1H4-207ENST00000549996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
NR1H4-207ENST00000549996 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
NR1H4-207ENST00000549996 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
NR1H4-207ENST00000549996 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
NR1H4-207ENST00000549996 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
NR1H4-207ENST00000549996 RAPGEF6Q8TEU7 1601 aa17.04■□□□□ 0.32
NR1H4-207ENST00000549996 ATP10BO94823 1461 aa17.04■□□□□ 0.32
NR1H4-207ENST00000549996 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
NR1H4-207ENST00000549996 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
NR1H4-207ENST00000549996 NUP153P49790 1475 aaKnown RBP17.01■□□□□ 0.31
NR1H4-207ENST00000549996 GLI2P10070 1586 aa17■□□□□ 0.31
NR1H4-207ENST00000549996 FMN1Q68DA7 1419 aa17■□□□□ 0.31
NR1H4-207ENST00000549996 CLIP1P30622 1438 aa16.96■□□□□ 0.31
NR1H4-207ENST00000549996 TSPOAP1O95153 1857 aa16.95■□□□□ 0.3
NR1H4-207ENST00000549996 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
NR1H4-207ENST00000549996 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
NR1H4-207ENST00000549996 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
NR1H4-207ENST00000549996 MAP3K4Q9Y6R4 1608 aa16.91■□□□□ 0.3
NR1H4-207ENST00000549996 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
NR1H4-207ENST00000549996 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
NR1H4-207ENST00000549996 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
NR1H4-207ENST00000549996 KDM6BO15054 1643 aa16.87■□□□□ 0.29
NR1H4-207ENST00000549996 PPRC1Q5VV67 1664 aaKnown RBP16.87■□□□□ 0.29
NR1H4-207ENST00000549996 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
NR1H4-207ENST00000549996 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
NR1H4-207ENST00000549996 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
NR1H4-207ENST00000549996 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
NR1H4-207ENST00000549996 CFAP43Q8NDM7 1665 aa16.84■□□□□ 0.29
NR1H4-207ENST00000549996 PCF11O94913 1555 aaKnown RBP16.83■□□□□ 0.28
NR1H4-207ENST00000549996 ABCA9Q8IUA7 1624 aa16.81■□□□□ 0.28
NR1H4-207ENST00000549996 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
NR1H4-207ENST00000549996 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
NR1H4-207ENST00000549996 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
NR1H4-207ENST00000549996 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
NR1H4-207ENST00000549996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.27
NR1H4-207ENST00000549996 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
NR1H4-207ENST00000549996 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
NR1H4-207ENST00000549996 NEO1Q92859 1461 aa16.73■□□□□ 0.27
NR1H4-207ENST00000549996 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
NR1H4-207ENST00000549996 KIF14Q15058 1648 aa16.7■□□□□ 0.26
NR1H4-207ENST00000549996 FANCAO15360 1455 aa16.7■□□□□ 0.26
NR1H4-207ENST00000549996 ARAP3Q8WWN8 1544 aa16.69■□□□□ 0.26
NR1H4-207ENST00000549996 RAPGEF3O95398 923 aa16.69■□□□□ 0.26
NR1H4-207ENST00000549996 PLCH2O75038 1416 aa16.68■□□□□ 0.26
NR1H4-207ENST00000549996 AKNAQ7Z591 1439 aa16.68■□□□□ 0.26
NR1H4-207ENST00000549996 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
NR1H4-207ENST00000549996 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
NR1H4-207ENST00000549996 VPS8Q8N3P4 1428 aa16.65■□□□□ 0.26
NR1H4-207ENST00000549996 DENND4BO75064 1496 aaPredicted RBP16.64■□□□□ 0.25
NR1H4-207ENST00000549996 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
NR1H4-207ENST00000549996 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
NR1H4-207ENST00000549996 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
NR1H4-207ENST00000549996 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
NR1H4-207ENST00000549996 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
NR1H4-207ENST00000549996 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms