RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
PFDN5-208ENST00000549995 KIAA0586Q9BVV6 1533 aa20.1■□□□□ 0.81
PFDN5-208ENST00000549995 CTTNBP2Q8WZ74 1663 aa20.06■□□□□ 0.8
PFDN5-208ENST00000549995 KIF21BO75037 1637 aa20.03■□□□□ 0.8
PFDN5-208ENST00000549995 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
PFDN5-208ENST00000549995 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
PFDN5-208ENST00000549995 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
PFDN5-208ENST00000549995 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
PFDN5-208ENST00000549995 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
PFDN5-208ENST00000549995 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
PFDN5-208ENST00000549995 JPH4Q96JJ6 628 aa19.91■□□□□ 0.78
PFDN5-208ENST00000549995 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
PFDN5-208ENST00000549995 KIAA0556O60303 1618 aa19.85■□□□□ 0.77
PFDN5-208ENST00000549995 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
PFDN5-208ENST00000549995 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
PFDN5-208ENST00000549995 CARMIL2Q6F5E8 1435 aa19.8■□□□□ 0.76
PFDN5-208ENST00000549995 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
PFDN5-208ENST00000549995 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
PFDN5-208ENST00000549995 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
PFDN5-208ENST00000549995 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
PFDN5-208ENST00000549995 EFCAB5A4FU69 1503 aa19.71■□□□□ 0.75
PFDN5-208ENST00000549995 UHRF1BP1LA0JNW5 1464 aa19.69■□□□□ 0.74
PFDN5-208ENST00000549995 PTPRGP23470 1445 aa19.68■□□□□ 0.74
PFDN5-208ENST00000549995 ABCC2Q92887 1545 aa19.65■□□□□ 0.74
PFDN5-208ENST00000549995 ABCA8O94911 1581 aa19.64■□□□□ 0.73
PFDN5-208ENST00000549995 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
PFDN5-208ENST00000549995 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
PFDN5-208ENST00000549995 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.73
PFDN5-208ENST00000549995 ARHGAP35Q9NRY4 1499 aa19.56■□□□□ 0.72
PFDN5-208ENST00000549995 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
PFDN5-208ENST00000549995 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
PFDN5-208ENST00000549995 RAPGEF6Q8TEU7 1601 aa19.53■□□□□ 0.72
PFDN5-208ENST00000549995 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
PFDN5-208ENST00000549995 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
PFDN5-208ENST00000549995 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
PFDN5-208ENST00000549995 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
PFDN5-208ENST00000549995 ABCC10Q5T3U5 1492 aa19.44■□□□□ 0.7
PFDN5-208ENST00000549995 FMN1Q68DA7 1419 aa19.43■□□□□ 0.7
PFDN5-208ENST00000549995 NUP153P49790 1475 aaKnown RBP19.43■□□□□ 0.7
PFDN5-208ENST00000549995 GLI2P10070 1586 aa19.41■□□□□ 0.7
PFDN5-208ENST00000549995 CLIP1P30622 1438 aa19.41■□□□□ 0.7
PFDN5-208ENST00000549995 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
PFDN5-208ENST00000549995 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
PFDN5-208ENST00000549995 HECW1Q76N89 1606 aa19.4■□□□□ 0.7
PFDN5-208ENST00000549995 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
PFDN5-208ENST00000549995 ATP10BO94823 1461 aa19.39■□□□□ 0.69
PFDN5-208ENST00000549995 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
PFDN5-208ENST00000549995 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
PFDN5-208ENST00000549995 LRRIQ1Q96JM4 1722 aa19.37■□□□□ 0.69
PFDN5-208ENST00000549995 WDR7Q9Y4E6 1490 aa19.36■□□□□ 0.69
PFDN5-208ENST00000549995 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
PFDN5-208ENST00000549995 PCF11O94913 1555 aaKnown RBP19.34■□□□□ 0.69
PFDN5-208ENST00000549995 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
PFDN5-208ENST00000549995 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.68
PFDN5-208ENST00000549995 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
PFDN5-208ENST00000549995 CASKIN1Q8WXD9 1431 aa19.32■□□□□ 0.68
PFDN5-208ENST00000549995 FYCO1Q9BQS8 1478 aa19.31■□□□□ 0.68
PFDN5-208ENST00000549995 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
PFDN5-208ENST00000549995 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
PFDN5-208ENST00000549995 ABCA9Q8IUA7 1624 aa19.26■□□□□ 0.67
PFDN5-208ENST00000549995 CDK13Q14004 1512 aaKnown RBP19.25■□□□□ 0.67
PFDN5-208ENST00000549995 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
PFDN5-208ENST00000549995 LOC105371045A0A1W2PR82 267 aa19.25■□□□□ 0.67
PFDN5-208ENST00000549995 TRHP20396 242 aaPredicted RBP19.25■□□□□ 0.67
PFDN5-208ENST00000549995 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
PFDN5-208ENST00000549995 MAGI3Q5TCQ9 1506 aa19.18■□□□□ 0.66
PFDN5-208ENST00000549995 TSPOAP1O95153 1857 aa19.18■□□□□ 0.66
PFDN5-208ENST00000549995 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
PFDN5-208ENST00000549995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.14■□□□□ 0.65
PFDN5-208ENST00000549995 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
PFDN5-208ENST00000549995 TEX14Q8IWB6 1497 aa19.13■□□□□ 0.65
PFDN5-208ENST00000549995 TTC37Q6PGP7 1564 aa19.13■□□□□ 0.65
PFDN5-208ENST00000549995 KIF14Q15058 1648 aa19.12■□□□□ 0.65
PFDN5-208ENST00000549995 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
PFDN5-208ENST00000549995 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
PFDN5-208ENST00000549995 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
PFDN5-208ENST00000549995 CD109Q6YHK3 1445 aa19.09■□□□□ 0.65
PFDN5-208ENST00000549995 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
PFDN5-208ENST00000549995 TIAM1Q13009 1591 aa19.07■□□□□ 0.64
PFDN5-208ENST00000549995 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
PFDN5-208ENST00000549995 MYO5CQ9NQX4 1742 aa19.07■□□□□ 0.64
PFDN5-208ENST00000549995 KDM6BO15054 1643 aa19.07■□□□□ 0.64
PFDN5-208ENST00000549995 CFAP74Q9C0B2 1584 aa19.06■□□□□ 0.64
PFDN5-208ENST00000549995 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
PFDN5-208ENST00000549995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
PFDN5-208ENST00000549995 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
PFDN5-208ENST00000549995 NEO1Q92859 1461 aa19.03■□□□□ 0.64
PFDN5-208ENST00000549995 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
PFDN5-208ENST00000549995 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
PFDN5-208ENST00000549995 CDC42BPAQ5VT25 1732 aa19.01■□□□□ 0.63
PFDN5-208ENST00000549995 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
PFDN5-208ENST00000549995 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
PFDN5-208ENST00000549995 PLCH2O75038 1416 aa19■□□□□ 0.63
PFDN5-208ENST00000549995 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
PFDN5-208ENST00000549995 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
PFDN5-208ENST00000549995 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
PFDN5-208ENST00000549995 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
PFDN5-208ENST00000549995 FANCAO15360 1455 aa18.94■□□□□ 0.62
PFDN5-208ENST00000549995 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
PFDN5-208ENST00000549995 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms