RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 NPM1P06748 294 aaKnown RBP eCLIP24.02■■□□□ 1.44
CNOT2-220ENST00000549750 KDM4FA0A1W2PPD8 638 aa24.01■■□□□ 1.43
CNOT2-220ENST00000549750 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
CNOT2-220ENST00000549750 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
CNOT2-220ENST00000549750 ILDR1Q86SU0 546 aaPredicted RBP24■■□□□ 1.43
CNOT2-220ENST00000549750 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
CNOT2-220ENST00000549750 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
CNOT2-220ENST00000549750 MAPKBP1O60336 1514 aa23.89■■□□□ 1.42
CNOT2-220ENST00000549750 CUL7Q14999 1698 aa23.89■■□□□ 1.42
CNOT2-220ENST00000549750 IGF1RP08069 1367 aa23.88■■□□□ 1.41
CNOT2-220ENST00000549750 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
CNOT2-220ENST00000549750 KDM6BO15054 1643 aa23.85■■□□□ 1.41
CNOT2-220ENST00000549750 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
CNOT2-220ENST00000549750 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
CNOT2-220ENST00000549750 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
CNOT2-220ENST00000549750 CARMIL1Q5VZK9 1371 aa23.71■■□□□ 1.39
CNOT2-220ENST00000549750 ADGRL1O94910 1474 aa23.59■■□□□ 1.37
CNOT2-220ENST00000549750 PTPRGP23470 1445 aa23.59■■□□□ 1.37
CNOT2-220ENST00000549750 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
CNOT2-220ENST00000549750 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
CNOT2-220ENST00000549750 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
CNOT2-220ENST00000549750 CARMIL2Q6F5E8 1435 aa23.52■■□□□ 1.36
CNOT2-220ENST00000549750 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
CNOT2-220ENST00000549750 ABCC2Q92887 1545 aa23.51■■□□□ 1.35
CNOT2-220ENST00000549750 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
CNOT2-220ENST00000549750 GLI2P10070 1586 aa23.49■■□□□ 1.35
CNOT2-220ENST00000549750 TNIKQ9UKE5 1360 aa23.49■■□□□ 1.35
CNOT2-220ENST00000549750 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
CNOT2-220ENST00000549750 HECW2Q9P2P5 1572 aa23.46■■□□□ 1.35
CNOT2-220ENST00000549750 PPRC1Q5VV67 1664 aaKnown RBP23.45■■□□□ 1.34
CNOT2-220ENST00000549750 DISP1Q96F81 1524 aa23.45■■□□□ 1.34
CNOT2-220ENST00000549750 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
CNOT2-220ENST00000549750 UHRF1BP1LA0JNW5 1464 aa23.41■■□□□ 1.34
CNOT2-220ENST00000549750 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
CNOT2-220ENST00000549750 KIAA0556O60303 1618 aa23.37■■□□□ 1.33
CNOT2-220ENST00000549750 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
CNOT2-220ENST00000549750 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
CNOT2-220ENST00000549750 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
CNOT2-220ENST00000549750 EPRSP07814 1512 aaKnown RBP23.34■■□□□ 1.33
CNOT2-220ENST00000549750 FBXO41Q8TF61 875 aa23.3■■□□□ 1.32
CNOT2-220ENST00000549750 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
CNOT2-220ENST00000549750 KDM5BQ9UGL1 1544 aa23.29■■□□□ 1.32
CNOT2-220ENST00000549750 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
CNOT2-220ENST00000549750 ZCCHC11Q5TAX3 1644 aaKnown RBP23.2■■□□□ 1.3
CNOT2-220ENST00000549750 EEA1Q15075 1411 aa23.16■■□□□ 1.3
CNOT2-220ENST00000549750 ABCA8O94911 1581 aa23.15■■□□□ 1.3
CNOT2-220ENST00000549750 WDR7Q9Y4E6 1490 aa23.14■■□□□ 1.29
CNOT2-220ENST00000549750 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
CNOT2-220ENST00000549750 CD109Q6YHK3 1445 aa23.12■■□□□ 1.29
CNOT2-220ENST00000549750 MAGI3Q5TCQ9 1506 aa23.1■■□□□ 1.29
CNOT2-220ENST00000549750 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
CNOT2-220ENST00000549750 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
CNOT2-220ENST00000549750 CFAP43Q8NDM7 1665 aa23.01■■□□□ 1.27
CNOT2-220ENST00000549750 KIF21BO75037 1637 aa23■■□□□ 1.27
CNOT2-220ENST00000549750 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
CNOT2-220ENST00000549750 PTPRMP28827 1452 aa22.96■■□□□ 1.27
CNOT2-220ENST00000549750 ARAP3Q8WWN8 1544 aa22.95■■□□□ 1.26
CNOT2-220ENST00000549750 ATP10BO94823 1461 aa22.92■■□□□ 1.26
CNOT2-220ENST00000549750 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
CNOT2-220ENST00000549750 P3H3Q8IVL6 736 aa22.89■■□□□ 1.25
CNOT2-220ENST00000549750 ADAMTSL3P82987 1691 aa22.88■■□□□ 1.25
CNOT2-220ENST00000549750 PHLDB1Q86UU1 1377 aa22.88■■□□□ 1.25
CNOT2-220ENST00000549750 EFCAB5A4FU69 1503 aa22.86■■□□□ 1.25
CNOT2-220ENST00000549750 RAPGEF3O95398 923 aa22.84■■□□□ 1.25
CNOT2-220ENST00000549750 LMTK3Q96Q04 1460 aa22.84■■□□□ 1.25
CNOT2-220ENST00000549750 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
CNOT2-220ENST00000549750 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.25
CNOT2-220ENST00000549750 NUP153P49790 1475 aaKnown RBP22.83■■□□□ 1.25
CNOT2-220ENST00000549750 PCF11O94913 1555 aaKnown RBP22.83■■□□□ 1.25
CNOT2-220ENST00000549750 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
CNOT2-220ENST00000549750 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
CNOT2-220ENST00000549750 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
CNOT2-220ENST00000549750 BCORL1Q5H9F3 1711 aa22.75■■□□□ 1.23
CNOT2-220ENST00000549750 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
CNOT2-220ENST00000549750 HSPA2P54652 639 aa22.73■■□□□ 1.23
CNOT2-220ENST00000549750 CERKQ8TCT0 537 aa22.73■■□□□ 1.23
CNOT2-220ENST00000549750 NEO1Q92859 1461 aa22.73■■□□□ 1.23
CNOT2-220ENST00000549750 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
CNOT2-220ENST00000549750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
CNOT2-220ENST00000549750 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
CNOT2-220ENST00000549750 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
CNOT2-220ENST00000549750 RIMS1Q86UR5 1692 aaKnown RBP22.63■■□□□ 1.21
CNOT2-220ENST00000549750 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CNOT2-220ENST00000549750 SOCS7O14512 581 aa22.63■■□□□ 1.21
CNOT2-220ENST00000549750 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
CNOT2-220ENST00000549750 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
CNOT2-220ENST00000549750 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
CNOT2-220ENST00000549750 FMN1Q68DA7 1419 aa22.62■■□□□ 1.21
CNOT2-220ENST00000549750 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
CNOT2-220ENST00000549750 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
CNOT2-220ENST00000549750 POGZQ7Z3K3 1410 aa22.59■■□□□ 1.21
CNOT2-220ENST00000549750 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.59■■□□□ 1.213e-8■■■□□ 17.7
CNOT2-220ENST00000549750 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
CNOT2-220ENST00000549750 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
CNOT2-220ENST00000549750 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
CNOT2-220ENST00000549750 CDK13Q14004 1512 aaKnown RBP22.57■■□□□ 1.2
CNOT2-220ENST00000549750 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
CNOT2-220ENST00000549750 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
CNOT2-220ENST00000549750 FANCAO15360 1455 aa22.54■■□□□ 1.2
CNOT2-220ENST00000549750 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms