RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 NUP160Q12769 1436 aa20.53■□□□□ 0.88
TROAP-210ENST00000549534 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
TROAP-210ENST00000549534 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
TROAP-210ENST00000549534 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
TROAP-210ENST00000549534 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
TROAP-210ENST00000549534 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
TROAP-210ENST00000549534 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
TROAP-210ENST00000549534 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
TROAP-210ENST00000549534 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
TROAP-210ENST00000549534 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
TROAP-210ENST00000549534 CUX1P39880 1505 aa20.27■□□□□ 0.83
TROAP-210ENST00000549534 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
TROAP-210ENST00000549534 COL17A1Q9UMD9 1497 aaPredicted RBP20.25■□□□□ 0.83
TROAP-210ENST00000549534 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
TROAP-210ENST00000549534 GLI2P10070 1586 aa20.22■□□□□ 0.83
TROAP-210ENST00000549534 CERKQ8TCT0 537 aa20.21■□□□□ 0.83
TROAP-210ENST00000549534 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
TROAP-210ENST00000549534 SPATA31D1Q6ZQQ2 1576 aa20.2■□□□□ 0.82
TROAP-210ENST00000549534 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.81
TROAP-210ENST00000549534 PLB1Q6P1J6 1458 aa20.13■□□□□ 0.81
TROAP-210ENST00000549534 ASXL2Q76L83 1435 aa20.07■□□□□ 0.8
TROAP-210ENST00000549534 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
TROAP-210ENST00000549534 PTPRMP28827 1452 aa20.04■□□□□ 0.8
TROAP-210ENST00000549534 ABCC2Q92887 1545 aa20.02■□□□□ 0.79
TROAP-210ENST00000549534 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
TROAP-210ENST00000549534 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
TROAP-210ENST00000549534 MAP3K4Q9Y6R4 1608 aa19.98■□□□□ 0.79
TROAP-210ENST00000549534 KIAA0586Q9BVV6 1533 aa19.95■□□□□ 0.78
TROAP-210ENST00000549534 PTPRGP23470 1445 aa19.94■□□□□ 0.78
TROAP-210ENST00000549534 EPRSP07814 1512 aaKnown RBP19.94■□□□□ 0.78
TROAP-210ENST00000549534 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
TROAP-210ENST00000549534 ADAMTSL3P82987 1691 aa19.88■□□□□ 0.77
TROAP-210ENST00000549534 KIF21BO75037 1637 aa19.87■□□□□ 0.77
TROAP-210ENST00000549534 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
TROAP-210ENST00000549534 HSPA2P54652 639 aa19.82■□□□□ 0.76
TROAP-210ENST00000549534 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
TROAP-210ENST00000549534 MAGI3Q5TCQ9 1506 aa19.78■□□□□ 0.76
TROAP-210ENST00000549534 CUL7Q14999 1698 aa19.76■□□□□ 0.75
TROAP-210ENST00000549534 KDM5BQ9UGL1 1544 aa19.75■□□□□ 0.75
TROAP-210ENST00000549534 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
TROAP-210ENST00000549534 CARMIL2Q6F5E8 1435 aa19.72■□□□□ 0.75
TROAP-210ENST00000549534 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
TROAP-210ENST00000549534 CD109Q6YHK3 1445 aa19.7■□□□□ 0.74
TROAP-210ENST00000549534 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
TROAP-210ENST00000549534 MADDQ8WXG6 1647 aa19.67■□□□□ 0.74
TROAP-210ENST00000549534 ARAP3Q8WWN8 1544 aa19.66■□□□□ 0.74
TROAP-210ENST00000549534 BCORL1Q5H9F3 1711 aa19.66■□□□□ 0.74
TROAP-210ENST00000549534 WDR7Q9Y4E6 1490 aa19.65■□□□□ 0.74
TROAP-210ENST00000549534 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
TROAP-210ENST00000549534 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
TROAP-210ENST00000549534 CFAP43Q8NDM7 1665 aa19.6■□□□□ 0.73
TROAP-210ENST00000549534 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
TROAP-210ENST00000549534 ZCCHC11Q5TAX3 1644 aaKnown RBP19.58■□□□□ 0.73
TROAP-210ENST00000549534 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
TROAP-210ENST00000549534 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
TROAP-210ENST00000549534 RIMS1Q86UR5 1692 aaKnown RBP19.52■□□□□ 0.72
TROAP-210ENST00000549534 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
TROAP-210ENST00000549534 PTPRTO14522 1441 aa19.45■□□□□ 0.7
TROAP-210ENST00000549534 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
TROAP-210ENST00000549534 POGZQ7Z3K3 1410 aa19.43■□□□□ 0.7
TROAP-210ENST00000549534 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
TROAP-210ENST00000549534 LTBP4Q8N2S1 1624 aa19.42■□□□□ 0.7
TROAP-210ENST00000549534 DISP1Q96F81 1524 aa19.41■□□□□ 0.7
TROAP-210ENST00000549534 IGF1RP08069 1367 aa19.4■□□□□ 0.7
TROAP-210ENST00000549534 MED1Q15648 1581 aaPredicted RBP19.39■□□□□ 0.69
TROAP-210ENST00000549534 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
TROAP-210ENST00000549534 IQGAP2Q13576 1575 aa19.36■□□□□ 0.69
TROAP-210ENST00000549534 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
TROAP-210ENST00000549534 UBAP1LF5GYI3 381 aa19.34■□□□□ 0.69
TROAP-210ENST00000549534 FANCAO15360 1455 aa19.33■□□□□ 0.68
TROAP-210ENST00000549534 NEO1Q92859 1461 aa19.33■□□□□ 0.68
TROAP-210ENST00000549534 TTC37Q6PGP7 1564 aa19.32■□□□□ 0.68
TROAP-210ENST00000549534 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
TROAP-210ENST00000549534 ARHGEF40Q8TER5 1519 aa19.31■□□□□ 0.68
TROAP-210ENST00000549534 FRMPD1Q5SYB0 1578 aa19.28■□□□□ 0.68
TROAP-210ENST00000549534 UHRF1BP1Q6BDS2 1440 aa19.27■□□□□ 0.68
TROAP-210ENST00000549534 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
TROAP-210ENST00000549534 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
TROAP-210ENST00000549534 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
TROAP-210ENST00000549534 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
TROAP-210ENST00000549534 HSPA1LP34931 641 aa19.2■□□□□ 0.66
TROAP-210ENST00000549534 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
TROAP-210ENST00000549534 ABCA9Q8IUA7 1624 aa19.19■□□□□ 0.66
TROAP-210ENST00000549534 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
TROAP-210ENST00000549534 MLECQ14165 292 aa19.17■□□□□ 0.66
TROAP-210ENST00000549534 DENND4BO75064 1496 aaPredicted RBP19.16■□□□□ 0.66
TROAP-210ENST00000549534 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
TROAP-210ENST00000549534 ABCA8O94911 1581 aa19.15■□□□□ 0.66
TROAP-210ENST00000549534 ARHGEF12Q9NZN5 1544 aa19.14■□□□□ 0.65
TROAP-210ENST00000549534 CEBPAP49715 358 aaPredicted RBP19.13■□□□□ 0.65
TROAP-210ENST00000549534 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
TROAP-210ENST00000549534 SETD1BQ9UPS6 1966 aaKnown RBP19.12■□□□□ 0.65
TROAP-210ENST00000549534 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
TROAP-210ENST00000549534 NCOA1Q15788 1441 aa19.1■□□□□ 0.65
TROAP-210ENST00000549534 ZFYVE16Q7Z3T8 1539 aa19.1■□□□□ 0.65
TROAP-210ENST00000549534 ZMYM4Q5VZL5 1548 aa19.09■□□□□ 0.65
TROAP-210ENST00000549534 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
TROAP-210ENST00000549534 RICTORQ6R327 1708 aa19.06■□□□□ 0.64
TROAP-210ENST00000549534 SIGLEC1Q9BZZ2 1709 aa19.06■□□□□ 0.64
TROAP-210ENST00000549534 TOM1O60784 492 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms