RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 LAMC3Q9Y6N6 1575 aa16.59■□□□□ 0.25
VDR-206ENST00000549336 HRCP23327 699 aa16.58■□□□□ 0.25
VDR-206ENST00000549336 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
VDR-206ENST00000549336 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
VDR-206ENST00000549336 BCANQ96GW7 911 aa16.57■□□□□ 0.24
VDR-206ENST00000549336 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
VDR-206ENST00000549336 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
VDR-206ENST00000549336 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
VDR-206ENST00000549336 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
VDR-206ENST00000549336 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
VDR-206ENST00000549336 CCNB3Q8WWL7 1395 aa16.53■□□□□ 0.24
VDR-206ENST00000549336 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
VDR-206ENST00000549336 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
VDR-206ENST00000549336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
VDR-206ENST00000549336 IGF1RP08069 1367 aa16.5■□□□□ 0.23
VDR-206ENST00000549336 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
VDR-206ENST00000549336 TOPBP1Q92547 1522 aa16.48■□□□□ 0.23
VDR-206ENST00000549336 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
VDR-206ENST00000549336 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.23
VDR-206ENST00000549336 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
VDR-206ENST00000549336 PTPRGP23470 1445 aa16.43■□□□□ 0.22
VDR-206ENST00000549336 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
VDR-206ENST00000549336 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
VDR-206ENST00000549336 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
VDR-206ENST00000549336 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
VDR-206ENST00000549336 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
VDR-206ENST00000549336 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
VDR-206ENST00000549336 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
VDR-206ENST00000549336 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
VDR-206ENST00000549336 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
VDR-206ENST00000549336 CUX1P39880 1505 aa16.34■□□□□ 0.21
VDR-206ENST00000549336 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
VDR-206ENST00000549336 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
VDR-206ENST00000549336 NEFLP07196 543 aa16.31■□□□□ 0.2
VDR-206ENST00000549336 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
VDR-206ENST00000549336 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
VDR-206ENST00000549336 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
VDR-206ENST00000549336 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
VDR-206ENST00000549336 KANK1Q14678 1352 aa16.27■□□□□ 0.19
VDR-206ENST00000549336 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
VDR-206ENST00000549336 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
VDR-206ENST00000549336 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
VDR-206ENST00000549336 SNAPC4Q5SXM2 1469 aa16.23■□□□□ 0.19
VDR-206ENST00000549336 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
VDR-206ENST00000549336 ANP32CO43423 234 aa16.2■□□□□ 0.18
VDR-206ENST00000549336 KANK4Q5T7N3 995 aaPredicted RBP16.2■□□□□ 0.18
VDR-206ENST00000549336 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
VDR-206ENST00000549336 PRG4Q92954 1404 aaPredicted RBP16.17■□□□□ 0.18
VDR-206ENST00000549336 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
VDR-206ENST00000549336 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
VDR-206ENST00000549336 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
VDR-206ENST00000549336 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
VDR-206ENST00000549336 KIF21BO75037 1637 aa16.16■□□□□ 0.18
VDR-206ENST00000549336 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
VDR-206ENST00000549336 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
VDR-206ENST00000549336 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
VDR-206ENST00000549336 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
VDR-206ENST00000549336 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
VDR-206ENST00000549336 NEFMP07197 916 aa16.13■□□□□ 0.17
VDR-206ENST00000549336 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
VDR-206ENST00000549336 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
VDR-206ENST00000549336 GGT6Q6P531 493 aa16.1■□□□□ 0.17
VDR-206ENST00000549336 MLECQ14165 292 aa16.1■□□□□ 0.17
VDR-206ENST00000549336 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
VDR-206ENST00000549336 RGL3Q3MIN7 710 aa16.08■□□□□ 0.16
VDR-206ENST00000549336 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
VDR-206ENST00000549336 HNRNPMP52272 730 aaKnown RBP eCLIP16.06■□□□□ 0.16
VDR-206ENST00000549336 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
VDR-206ENST00000549336 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
VDR-206ENST00000549336 CUL7Q14999 1698 aa16.05■□□□□ 0.16
VDR-206ENST00000549336 EIF4G2P78344 907 aaKnown RBP eCLIP16.03■□□□□ 0.16
VDR-206ENST00000549336 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
VDR-206ENST00000549336 KIF3BO15066 747 aa16.03■□□□□ 0.16
VDR-206ENST00000549336 SLC24A1O60721 1099 aa16.02■□□□□ 0.15
VDR-206ENST00000549336 TIMELESSQ9UNS1 1208 aa16.01■□□□□ 0.15
VDR-206ENST00000549336 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
VDR-206ENST00000549336 C14orf37Q86TY3 774 aa16.01■□□□□ 0.15
VDR-206ENST00000549336 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
VDR-206ENST00000549336 NUP155O75694 1391 aa15.99■□□□□ 0.15
VDR-206ENST00000549336 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
VDR-206ENST00000549336 FYCO1Q9BQS8 1478 aa15.98■□□□□ 0.15
VDR-206ENST00000549336 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
VDR-206ENST00000549336 PKD2Q13563 968 aa15.96■□□□□ 0.15
VDR-206ENST00000549336 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
VDR-206ENST00000549336 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.14
VDR-206ENST00000549336 WASHC2CQ9Y4E1 1318 aa15.96■□□□□ 0.14
VDR-206ENST00000549336 UACAQ9BZF9 1416 aa15.94■□□□□ 0.14
VDR-206ENST00000549336 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
VDR-206ENST00000549336 POGKQ9P215 609 aa15.9■□□□□ 0.14
VDR-206ENST00000549336 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
VDR-206ENST00000549336 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
VDR-206ENST00000549336 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
VDR-206ENST00000549336 RAB3GAP2Q9H2M9 1393 aa15.88■□□□□ 0.13
VDR-206ENST00000549336 WDR62O43379 1518 aa15.88■□□□□ 0.13
VDR-206ENST00000549336 DCAF11Q8TEB1 546 aa15.87■□□□□ 0.13
VDR-206ENST00000549336 TROQ12816 1431 aaPredicted RBP15.87■□□□□ 0.13
VDR-206ENST00000549336 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
VDR-206ENST00000549336 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
VDR-206ENST00000549336 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
VDR-206ENST00000549336 DDX10Q13206 875 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms