RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 WDR62O43379 1518 aa13.23□□□□□ -0.29
CNOT2-208ENST00000548021 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.3
CNOT2-208ENST00000548021 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
CNOT2-208ENST00000548021 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-208ENST00000548021 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
CNOT2-208ENST00000548021 TTBK1Q5TCY1 1321 aaPredicted RBP13.17□□□□□ -0.3
CNOT2-208ENST00000548021 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
CNOT2-208ENST00000548021 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.3
CNOT2-208ENST00000548021 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
CNOT2-208ENST00000548021 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
CNOT2-208ENST00000548021 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
CNOT2-208ENST00000548021 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
CNOT2-208ENST00000548021 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
CNOT2-208ENST00000548021 MAP3K1Q13233 1512 aa13.09□□□□□ -0.31
CNOT2-208ENST00000548021 EIF4G3O43432 1585 aaKnown RBP13.09□□□□□ -0.31
CNOT2-208ENST00000548021 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
CNOT2-208ENST00000548021 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
CNOT2-208ENST00000548021 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNOT2-208ENST00000548021 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
CNOT2-208ENST00000548021 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
CNOT2-208ENST00000548021 APLP2Q06481 763 aa13.06□□□□□ -0.32
CNOT2-208ENST00000548021 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
CNOT2-208ENST00000548021 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
CNOT2-208ENST00000548021 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
CNOT2-208ENST00000548021 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
CNOT2-208ENST00000548021 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.33
CNOT2-208ENST00000548021 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
CNOT2-208ENST00000548021 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
CNOT2-208ENST00000548021 CASKIN1Q8WXD9 1431 aa13□□□□□ -0.33
CNOT2-208ENST00000548021 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
CNOT2-208ENST00000548021 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
CNOT2-208ENST00000548021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
CNOT2-208ENST00000548021 FMN1Q68DA7 1419 aa12.96□□□□□ -0.33
CNOT2-208ENST00000548021 UGGT2Q9NYU1 1516 aa12.95□□□□□ -0.34
CNOT2-208ENST00000548021 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
CNOT2-208ENST00000548021 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
CNOT2-208ENST00000548021 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
CNOT2-208ENST00000548021 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
CNOT2-208ENST00000548021 CCER1Q8TC90 406 aaPredicted RBP12.91□□□□□ -0.34
CNOT2-208ENST00000548021 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
CNOT2-208ENST00000548021 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
CNOT2-208ENST00000548021 KIAA0586Q9BVV6 1533 aa12.9□□□□□ -0.34
CNOT2-208ENST00000548021 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
CNOT2-208ENST00000548021 CCNB3Q8WWL7 1395 aa12.9□□□□□ -0.34
CNOT2-208ENST00000548021 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
CNOT2-208ENST00000548021 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
CNOT2-208ENST00000548021 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
CNOT2-208ENST00000548021 PHLDB1Q86UU1 1377 aa12.88□□□□□ -0.35
CNOT2-208ENST00000548021 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
CNOT2-208ENST00000548021 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
CNOT2-208ENST00000548021 DISP1Q96F81 1524 aa12.86□□□□□ -0.35
CNOT2-208ENST00000548021 MAGI3Q5TCQ9 1506 aa12.84□□□□□ -0.35
CNOT2-208ENST00000548021 NUP160Q12769 1436 aa12.84□□□□□ -0.35
CNOT2-208ENST00000548021 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
CNOT2-208ENST00000548021 SUPT6HQ7KZ85 1726 aaKnown RBP12.83□□□□□ -0.36
CNOT2-208ENST00000548021 ARHGEF11O15085 1522 aa12.81□□□□□ -0.36
CNOT2-208ENST00000548021 EPRSP07814 1512 aaKnown RBP12.8□□□□□ -0.36
CNOT2-208ENST00000548021 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
CNOT2-208ENST00000548021 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
CNOT2-208ENST00000548021 CHD1O14646 1710 aa12.79□□□□□ -0.36
CNOT2-208ENST00000548021 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
CNOT2-208ENST00000548021 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
CNOT2-208ENST00000548021 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
CNOT2-208ENST00000548021 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
CNOT2-208ENST00000548021 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
CNOT2-208ENST00000548021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■□□□ 12.8
CNOT2-208ENST00000548021 NUP153P49790 1475 aaKnown RBP12.74□□□□□ -0.37
CNOT2-208ENST00000548021 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
CNOT2-208ENST00000548021 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-208ENST00000548021 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
CNOT2-208ENST00000548021 TCOF1Q13428 1488 aaKnown RBP12.71□□□□□ -0.38
CNOT2-208ENST00000548021 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
CNOT2-208ENST00000548021 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
CNOT2-208ENST00000548021 ABCA8O94911 1581 aa12.69□□□□□ -0.38
CNOT2-208ENST00000548021 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
CNOT2-208ENST00000548021 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
CNOT2-208ENST00000548021 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
CNOT2-208ENST00000548021 ITGAEP38570 1179 aa12.68□□□□□ -0.38
CNOT2-208ENST00000548021 ADCY10Q96PN6 1610 aa12.68□□□□□ -0.38
CNOT2-208ENST00000548021 CARMIL2Q6F5E8 1435 aa12.68□□□□□ -0.38
CNOT2-208ENST00000548021 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
CNOT2-208ENST00000548021 PLB1Q6P1J6 1458 aa12.67□□□□□ -0.38
CNOT2-208ENST00000548021 FBLN2P98095 1184 aa12.67□□□□□ -0.38
CNOT2-208ENST00000548021 PTPRKQ15262 1439 aa12.65□□□□□ -0.38
CNOT2-208ENST00000548021 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
CNOT2-208ENST00000548021 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
CNOT2-208ENST00000548021 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
CNOT2-208ENST00000548021 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
CNOT2-208ENST00000548021 KIF14Q15058 1648 aa12.62□□□□□ -0.39
CNOT2-208ENST00000548021 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
CNOT2-208ENST00000548021 HFM1A2PYH4 1435 aa12.61□□□□□ -0.39
CNOT2-208ENST00000548021 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
CNOT2-208ENST00000548021 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
CNOT2-208ENST00000548021 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
CNOT2-208ENST00000548021 PRG4Q92954 1404 aaPredicted RBP12.6□□□□□ -0.39
CNOT2-208ENST00000548021 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
CNOT2-208ENST00000548021 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.4
CNOT2-208ENST00000548021 NAIPQ13075 1403 aa12.57□□□□□ -0.4
CNOT2-208ENST00000548021 AKNAQ7Z591 1439 aa12.57□□□□□ -0.4
CNOT2-208ENST00000548021 CROCC2H7BZ55 1655 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms