RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
CCDC59-202ENST00000547758 KIF13AQ9H1H9 1805 aa24.6■■□□□ 1.53
CCDC59-202ENST00000547758 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
CCDC59-202ENST00000547758 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
CCDC59-202ENST00000547758 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
CCDC59-202ENST00000547758 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
CCDC59-202ENST00000547758 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
CCDC59-202ENST00000547758 PRG4Q92954 1404 aaPredicted RBP24.41■■□□□ 1.5
CCDC59-202ENST00000547758 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
CCDC59-202ENST00000547758 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
CCDC59-202ENST00000547758 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
CCDC59-202ENST00000547758 ABCC10Q5T3U5 1492 aa24.32■■□□□ 1.48
CCDC59-202ENST00000547758 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
CCDC59-202ENST00000547758 DIP2BQ9P265 1576 aa24.29■■□□□ 1.48
CCDC59-202ENST00000547758 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
CCDC59-202ENST00000547758 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
CCDC59-202ENST00000547758 NPM1P06748 294 aaKnown RBP eCLIP24.23■■□□□ 1.47
CCDC59-202ENST00000547758 TSPOAP1O95153 1857 aa24.2■■□□□ 1.46
CCDC59-202ENST00000547758 KDM6BO15054 1643 aa24.2■■□□□ 1.46
CCDC59-202ENST00000547758 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
CCDC59-202ENST00000547758 CUL7Q14999 1698 aa24.08■■□□□ 1.45
CCDC59-202ENST00000547758 KDM4FA0A1W2PPD8 638 aa24.07■■□□□ 1.44
CCDC59-202ENST00000547758 IGF1RP08069 1367 aa23.99■■□□□ 1.43
CCDC59-202ENST00000547758 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
CCDC59-202ENST00000547758 PPRC1Q5VV67 1664 aaKnown RBP23.95■■□□□ 1.43
CCDC59-202ENST00000547758 PTPRGP23470 1445 aa23.95■■□□□ 1.42
CCDC59-202ENST00000547758 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
CCDC59-202ENST00000547758 GLI2P10070 1586 aa23.91■■□□□ 1.42
CCDC59-202ENST00000547758 CARMIL2Q6F5E8 1435 aa23.88■■□□□ 1.41
CCDC59-202ENST00000547758 ASXL2Q76L83 1435 aa23.88■■□□□ 1.41
CCDC59-202ENST00000547758 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
CCDC59-202ENST00000547758 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
CCDC59-202ENST00000547758 TTBK1Q5TCY1 1321 aaPredicted RBP23.87■■□□□ 1.41
CCDC59-202ENST00000547758 IQGAP2Q13576 1575 aa23.86■■□□□ 1.41
CCDC59-202ENST00000547758 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
CCDC59-202ENST00000547758 CARMIL1Q5VZK9 1371 aa23.83■■□□□ 1.41
CCDC59-202ENST00000547758 UHRF1BP1LA0JNW5 1464 aa23.82■■□□□ 1.4
CCDC59-202ENST00000547758 ILDR1Q86SU0 546 aaPredicted RBP23.81■■□□□ 1.4
CCDC59-202ENST00000547758 MAP3K4Q9Y6R4 1608 aa23.79■■□□□ 1.4
CCDC59-202ENST00000547758 UACAQ9BZF9 1416 aa23.77■■□□□ 1.4
CCDC59-202ENST00000547758 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
CCDC59-202ENST00000547758 EPRSP07814 1512 aaKnown RBP23.74■■□□□ 1.39
CCDC59-202ENST00000547758 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
CCDC59-202ENST00000547758 ZCCHC11Q5TAX3 1644 aaKnown RBP23.73■■□□□ 1.39
CCDC59-202ENST00000547758 KDM5BQ9UGL1 1544 aa23.73■■□□□ 1.39
CCDC59-202ENST00000547758 TEX14Q8IWB6 1497 aa23.71■■□□□ 1.39
CCDC59-202ENST00000547758 HECW2Q9P2P5 1572 aa23.68■■□□□ 1.38
CCDC59-202ENST00000547758 UGGT2Q9NYU1 1516 aa23.67■■□□□ 1.38
CCDC59-202ENST00000547758 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
CCDC59-202ENST00000547758 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
CCDC59-202ENST00000547758 WDR7Q9Y4E6 1490 aa23.58■■□□□ 1.37
CCDC59-202ENST00000547758 CFAP43Q8NDM7 1665 aa23.55■■□□□ 1.36
CCDC59-202ENST00000547758 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
CCDC59-202ENST00000547758 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
CCDC59-202ENST00000547758 CD109Q6YHK3 1445 aa23.47■■□□□ 1.35
CCDC59-202ENST00000547758 KIF21BO75037 1637 aa23.45■■□□□ 1.34
CCDC59-202ENST00000547758 ABCA8O94911 1581 aa23.45■■□□□ 1.34
CCDC59-202ENST00000547758 GOLGA3Q08378 1498 aa23.42■■□□□ 1.34
CCDC59-202ENST00000547758 KCNH8Q96L42 1107 aa23.39■■□□□ 1.33
CCDC59-202ENST00000547758 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.32
CCDC59-202ENST00000547758 ADAMTSL3P82987 1691 aa23.27■■□□□ 1.32
CCDC59-202ENST00000547758 ABCA9Q8IUA7 1624 aa23.26■■□□□ 1.31
CCDC59-202ENST00000547758 FBXO41Q8TF61 875 aa23.23■■□□□ 1.31
CCDC59-202ENST00000547758 PRXQ9BXM0 1461 aa23.23■■□□□ 1.31
CCDC59-202ENST00000547758 PTPRMP28827 1452 aa23.22■■□□□ 1.31
CCDC59-202ENST00000547758 ATP10BO94823 1461 aa23.21■■□□□ 1.31
CCDC59-202ENST00000547758 PHLDB1Q86UU1 1377 aa23.19■■□□□ 1.3
CCDC59-202ENST00000547758 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
CCDC59-202ENST00000547758 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
CCDC59-202ENST00000547758 MAPK8IP2Q13387 824 aaPredicted RBP23.18■■□□□ 1.3
CCDC59-202ENST00000547758 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
CCDC59-202ENST00000547758 NEO1Q92859 1461 aa23.15■■□□□ 1.3
CCDC59-202ENST00000547758 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
CCDC59-202ENST00000547758 FRMPD1Q5SYB0 1578 aa23.14■■□□□ 1.3
CCDC59-202ENST00000547758 RAPGEF6Q8TEU7 1601 aa23.13■■□□□ 1.29
CCDC59-202ENST00000547758 PCF11O94913 1555 aaKnown RBP23.12■■□□□ 1.29
CCDC59-202ENST00000547758 RAPGEF3O95398 923 aa23.12■■□□□ 1.29
CCDC59-202ENST00000547758 SAMD9Q5K651 1589 aa23.12■■□□□ 1.29
CCDC59-202ENST00000547758 P3H3Q8IVL6 736 aa23.11■■□□□ 1.29
CCDC59-202ENST00000547758 RIMS1Q86UR5 1692 aaKnown RBP23.07■■□□□ 1.28
CCDC59-202ENST00000547758 LMTK3Q96Q04 1460 aa23.06■■□□□ 1.28
CCDC59-202ENST00000547758 ARHGEF40Q8TER5 1519 aa23.06■■□□□ 1.28
CCDC59-202ENST00000547758 ARID4BQ4LE39 1312 aaPredicted RBP23.05■■□□□ 1.28
CCDC59-202ENST00000547758 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
CCDC59-202ENST00000547758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23■■□□□ 1.27
CCDC59-202ENST00000547758 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
CCDC59-202ENST00000547758 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
CCDC59-202ENST00000547758 NUP153P49790 1475 aaKnown RBP22.99■■□□□ 1.27
CCDC59-202ENST00000547758 SCAF1Q9H7N4 1312 aaKnown RBP22.99■■□□□ 1.27
CCDC59-202ENST00000547758 CFAP74Q9C0B2 1584 aa22.98■■□□□ 1.27
CCDC59-202ENST00000547758 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
CCDC59-202ENST00000547758 SIGLEC1Q9BZZ2 1709 aa22.93■■□□□ 1.26
CCDC59-202ENST00000547758 FHOD3Q2V2M9 1422 aa22.92■■□□□ 1.26
CCDC59-202ENST00000547758 AKNAQ7Z591 1439 aa22.92■■□□□ 1.26
CCDC59-202ENST00000547758 ZMYM4Q5VZL5 1548 aa22.92■■□□□ 1.26
CCDC59-202ENST00000547758 FANCAO15360 1455 aa22.92■■□□□ 1.26
CCDC59-202ENST00000547758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.9■■□□□ 1.26
CCDC59-202ENST00000547758 POGZQ7Z3K3 1410 aa22.9■■□□□ 1.26
CCDC59-202ENST00000547758 TTC37Q6PGP7 1564 aa22.89■■□□□ 1.26
CCDC59-202ENST00000547758 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms