RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 NUP160Q12769 1436 aa15.96■□□□□ 0.15
PTPRR-206ENST00000547752 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
PTPRR-206ENST00000547752 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
PTPRR-206ENST00000547752 CLASP1Q7Z460 1538 aa15.92■□□□□ 0.14
PTPRR-206ENST00000547752 KIF21BO75037 1637 aa15.9■□□□□ 0.14
PTPRR-206ENST00000547752 DNAJC5Q9H3Z4 198 aa15.88■□□□□ 0.13
PTPRR-206ENST00000547752 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
PTPRR-206ENST00000547752 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
PTPRR-206ENST00000547752 GOLGA3Q08378 1498 aa15.82■□□□□ 0.12
PTPRR-206ENST00000547752 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
PTPRR-206ENST00000547752 SHROOM2Q13796 1616 aa15.8■□□□□ 0.12
PTPRR-206ENST00000547752 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
PTPRR-206ENST00000547752 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
PTPRR-206ENST00000547752 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
PTPRR-206ENST00000547752 ERCC6L2Q5T890 1561 aa15.76■□□□□ 0.11
PTPRR-206ENST00000547752 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
PTPRR-206ENST00000547752 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
PTPRR-206ENST00000547752 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
PTPRR-206ENST00000547752 UGGT2Q9NYU1 1516 aa15.73■□□□□ 0.11
PTPRR-206ENST00000547752 RIMBP3CA6NJZ7 1639 aa15.73■□□□□ 0.11
PTPRR-206ENST00000547752 RIMBP3BA6NNM3 1639 aa15.73■□□□□ 0.11
PTPRR-206ENST00000547752 RIMBP3Q9UFD9 1639 aa15.73■□□□□ 0.11
PTPRR-206ENST00000547752 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
PTPRR-206ENST00000547752 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
PTPRR-206ENST00000547752 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
PTPRR-206ENST00000547752 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
PTPRR-206ENST00000547752 CARMIL2Q6F5E8 1435 aa15.65■□□□□ 0.1
PTPRR-206ENST00000547752 KIAA0556O60303 1618 aa15.64■□□□□ 0.09
PTPRR-206ENST00000547752 SAMD9Q5K651 1589 aa15.63■□□□□ 0.09
PTPRR-206ENST00000547752 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
PTPRR-206ENST00000547752 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
PTPRR-206ENST00000547752 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
PTPRR-206ENST00000547752 PTPRGP23470 1445 aa15.59■□□□□ 0.09
PTPRR-206ENST00000547752 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.08
PTPRR-206ENST00000547752 TTBK1Q5TCY1 1321 aaPredicted RBP15.57■□□□□ 0.08
PTPRR-206ENST00000547752 FHOD3Q2V2M9 1422 aa15.57■□□□□ 0.08
PTPRR-206ENST00000547752 CLIP1P30622 1438 aa15.55■□□□□ 0.08
PTPRR-206ENST00000547752 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
PTPRR-206ENST00000547752 PPP6R1Q9UPN7 881 aa15.52■□□□□ 0.08
PTPRR-206ENST00000547752 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
PTPRR-206ENST00000547752 PLB1Q6P1J6 1458 aa15.49■□□□□ 0.07
PTPRR-206ENST00000547752 ABCA8O94911 1581 aa15.48■□□□□ 0.07
PTPRR-206ENST00000547752 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
PTPRR-206ENST00000547752 ADCY10Q96PN6 1610 aa15.47■□□□□ 0.07
PTPRR-206ENST00000547752 ABCC2Q92887 1545 aa15.45■□□□□ 0.06
PTPRR-206ENST00000547752 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
PTPRR-206ENST00000547752 RAPGEF6Q8TEU7 1601 aa15.41■□□□□ 0.06
PTPRR-206ENST00000547752 NUP153P49790 1475 aaKnown RBP15.39■□□□□ 0.05
PTPRR-206ENST00000547752 KDM5BQ9UGL1 1544 aa15.39■□□□□ 0.05
PTPRR-206ENST00000547752 ADRA2BP18089 450 aa15.38■□□□□ 0.05
PTPRR-206ENST00000547752 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
PTPRR-206ENST00000547752 ATP10BO94823 1461 aa15.37■□□□□ 0.05
PTPRR-206ENST00000547752 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
PTPRR-206ENST00000547752 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
PTPRR-206ENST00000547752 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPRR-206ENST00000547752 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
PTPRR-206ENST00000547752 ZCCHC11Q5TAX3 1644 aaKnown RBP15.34■□□□□ 0.05
PTPRR-206ENST00000547752 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
PTPRR-206ENST00000547752 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
PTPRR-206ENST00000547752 FYCO1Q9BQS8 1478 aa15.32■□□□□ 0.04
PTPRR-206ENST00000547752 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
PTPRR-206ENST00000547752 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
PTPRR-206ENST00000547752 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
PTPRR-206ENST00000547752 LRRIQ1Q96JM4 1722 aa15.3■□□□□ 0.04
PTPRR-206ENST00000547752 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
PTPRR-206ENST00000547752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
PTPRR-206ENST00000547752 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
PTPRR-206ENST00000547752 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
PTPRR-206ENST00000547752 WDR7Q9Y4E6 1490 aa15.24■□□□□ 0.03
PTPRR-206ENST00000547752 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
PTPRR-206ENST00000547752 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
PTPRR-206ENST00000547752 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.03
PTPRR-206ENST00000547752 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
PTPRR-206ENST00000547752 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
PTPRR-206ENST00000547752 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
PTPRR-206ENST00000547752 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
PTPRR-206ENST00000547752 TROQ12816 1431 aaPredicted RBP15.18■□□□□ 0.02
PTPRR-206ENST00000547752 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
PTPRR-206ENST00000547752 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
PTPRR-206ENST00000547752 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
PTPRR-206ENST00000547752 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
PTPRR-206ENST00000547752 CFAP43Q8NDM7 1665 aa15.17■□□□□ 0.02
PTPRR-206ENST00000547752 GLI2P10070 1586 aa15.17■□□□□ 0.02
PTPRR-206ENST00000547752 KIF13AQ9H1H9 1805 aa15.16■□□□□ 0.02
PTPRR-206ENST00000547752 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
PTPRR-206ENST00000547752 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
PTPRR-206ENST00000547752 MTUS2Q5JR59 1369 aa15.13■□□□□ 0.01
PTPRR-206ENST00000547752 KIF14Q15058 1648 aa15.12■□□□□ 0.01
PTPRR-206ENST00000547752 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
PTPRR-206ENST00000547752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPRR-206ENST00000547752 APLP2Q06481 763 aa15.12■□□□□ 0.01
PTPRR-206ENST00000547752 ABCA9Q8IUA7 1624 aa15.11■□□□□ 0.01
PTPRR-206ENST00000547752 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
PTPRR-206ENST00000547752 MAP3K4Q9Y6R4 1608 aa15.1■□□□□ 0.01
PTPRR-206ENST00000547752 CD109Q6YHK3 1445 aa15.08■□□□□ 0.01
PTPRR-206ENST00000547752 TTC37Q6PGP7 1564 aa15.08■□□□□ 0.01
PTPRR-206ENST00000547752 PPRC1Q5VV67 1664 aaKnown RBP15.06■□□□□ 0
PTPRR-206ENST00000547752 NCOA2Q15596 1464 aa15.05■□□□□ -0
PTPRR-206ENST00000547752 TSPOAP1O95153 1857 aa15.03■□□□□ -0
PTPRR-206ENST00000547752 PLCH2O75038 1416 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms