RNA–Protein interactions for RNA: ENST00000547262.1

R3HDM2-211, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 840 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-211ENST00000547262 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
R3HDM2-211ENST00000547262 NUP160Q12769 1436 aa16.84■□□□□ 0.29
R3HDM2-211ENST00000547262 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
R3HDM2-211ENST00000547262 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
R3HDM2-211ENST00000547262 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
R3HDM2-211ENST00000547262 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
R3HDM2-211ENST00000547262 IGF1RP08069 1367 aa16.7■□□□□ 0.26
R3HDM2-211ENST00000547262 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
R3HDM2-211ENST00000547262 JPH4Q96JJ6 628 aa16.68■□□□□ 0.26
R3HDM2-211ENST00000547262 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
R3HDM2-211ENST00000547262 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
R3HDM2-211ENST00000547262 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
R3HDM2-211ENST00000547262 CUL7Q14999 1698 aa16.6■□□□□ 0.25
R3HDM2-211ENST00000547262 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
R3HDM2-211ENST00000547262 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.24
R3HDM2-211ENST00000547262 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
R3HDM2-211ENST00000547262 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
R3HDM2-211ENST00000547262 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
R3HDM2-211ENST00000547262 PTPRGP23470 1445 aa16.42■□□□□ 0.22
R3HDM2-211ENST00000547262 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
R3HDM2-211ENST00000547262 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
R3HDM2-211ENST00000547262 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
R3HDM2-211ENST00000547262 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
R3HDM2-211ENST00000547262 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
R3HDM2-211ENST00000547262 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
R3HDM2-211ENST00000547262 UGGT2Q9NYU1 1516 aa16.35■□□□□ 0.21
R3HDM2-211ENST00000547262 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
R3HDM2-211ENST00000547262 EEA1Q15075 1411 aa16.33■□□□□ 0.2
R3HDM2-211ENST00000547262 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
R3HDM2-211ENST00000547262 UHRF1BP1LA0JNW5 1464 aa16.32■□□□□ 0.2
R3HDM2-211ENST00000547262 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
R3HDM2-211ENST00000547262 ABCC2Q92887 1545 aa16.3■□□□□ 0.2
R3HDM2-211ENST00000547262 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
R3HDM2-211ENST00000547262 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
R3HDM2-211ENST00000547262 DIP2BQ9P265 1576 aa16.28■□□□□ 0.2
R3HDM2-211ENST00000547262 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
R3HDM2-211ENST00000547262 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
R3HDM2-211ENST00000547262 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
R3HDM2-211ENST00000547262 KIF21BO75037 1637 aa16.25■□□□□ 0.19
R3HDM2-211ENST00000547262 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
R3HDM2-211ENST00000547262 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
R3HDM2-211ENST00000547262 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
R3HDM2-211ENST00000547262 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
R3HDM2-211ENST00000547262 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
R3HDM2-211ENST00000547262 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
R3HDM2-211ENST00000547262 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
R3HDM2-211ENST00000547262 GLI2P10070 1586 aa16.19■□□□□ 0.18
R3HDM2-211ENST00000547262 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
R3HDM2-211ENST00000547262 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
R3HDM2-211ENST00000547262 ABCA8O94911 1581 aa16.1■□□□□ 0.17
R3HDM2-211ENST00000547262 KDM6BO15054 1643 aa16.09■□□□□ 0.17
R3HDM2-211ENST00000547262 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
R3HDM2-211ENST00000547262 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
R3HDM2-211ENST00000547262 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
R3HDM2-211ENST00000547262 MAP3K4Q9Y6R4 1608 aa16.04■□□□□ 0.16
R3HDM2-211ENST00000547262 SAMD9Q5K651 1589 aa16.04■□□□□ 0.16
R3HDM2-211ENST00000547262 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
R3HDM2-211ENST00000547262 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.16
R3HDM2-211ENST00000547262 MAGI3Q5TCQ9 1506 aa16■□□□□ 0.15
R3HDM2-211ENST00000547262 P3H3Q8IVL6 736 aa16■□□□□ 0.15
R3HDM2-211ENST00000547262 ATP10BO94823 1461 aa15.99■□□□□ 0.15
R3HDM2-211ENST00000547262 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
R3HDM2-211ENST00000547262 EFCAB5A4FU69 1503 aa15.98■□□□□ 0.15
R3HDM2-211ENST00000547262 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
R3HDM2-211ENST00000547262 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
R3HDM2-211ENST00000547262 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
R3HDM2-211ENST00000547262 CFAP43Q8NDM7 1665 aa15.94■□□□□ 0.14
R3HDM2-211ENST00000547262 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
R3HDM2-211ENST00000547262 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
R3HDM2-211ENST00000547262 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
R3HDM2-211ENST00000547262 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
R3HDM2-211ENST00000547262 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
R3HDM2-211ENST00000547262 NUP153P49790 1475 aaKnown RBP15.9■□□□□ 0.14
R3HDM2-211ENST00000547262 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
R3HDM2-211ENST00000547262 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
R3HDM2-211ENST00000547262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
R3HDM2-211ENST00000547262 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
R3HDM2-211ENST00000547262 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
R3HDM2-211ENST00000547262 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
R3HDM2-211ENST00000547262 PLEKHD1A6NEE1 506 aa15.86■□□□□ 0.13
R3HDM2-211ENST00000547262 ABCA9Q8IUA7 1624 aa15.86■□□□□ 0.13
R3HDM2-211ENST00000547262 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
R3HDM2-211ENST00000547262 NEO1Q92859 1461 aa15.83■□□□□ 0.12
R3HDM2-211ENST00000547262 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
R3HDM2-211ENST00000547262 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
R3HDM2-211ENST00000547262 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
R3HDM2-211ENST00000547262 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.11
R3HDM2-211ENST00000547262 CLIP1P30622 1438 aa15.77■□□□□ 0.11
R3HDM2-211ENST00000547262 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
R3HDM2-211ENST00000547262 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
R3HDM2-211ENST00000547262 CEP162Q5TB80 1403 aa15.74■□□□□ 0.11
R3HDM2-211ENST00000547262 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
R3HDM2-211ENST00000547262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
R3HDM2-211ENST00000547262 AKNAQ7Z591 1439 aa15.7■□□□□ 0.1
R3HDM2-211ENST00000547262 FANCAO15360 1455 aa15.7■□□□□ 0.1
R3HDM2-211ENST00000547262 DENND4BO75064 1496 aaPredicted RBP15.69■□□□□ 0.1
R3HDM2-211ENST00000547262 PLCH2O75038 1416 aa15.68■□□□□ 0.1
R3HDM2-211ENST00000547262 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
R3HDM2-211ENST00000547262 CFAP74Q9C0B2 1584 aa15.68■□□□□ 0.1
R3HDM2-211ENST00000547262 ATP1B4Q9UN42 357 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms