RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
LINC00661-202ENST00000547102 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
LINC00661-202ENST00000547102 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
LINC00661-202ENST00000547102 KIAA0586Q9BVV6 1533 aa18.3■□□□□ 0.52
LINC00661-202ENST00000547102 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
LINC00661-202ENST00000547102 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
LINC00661-202ENST00000547102 CARMIL2Q6F5E8 1435 aa18.15■□□□□ 0.5
LINC00661-202ENST00000547102 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00661-202ENST00000547102 ADCY10Q96PN6 1610 aa18.1■□□□□ 0.49
LINC00661-202ENST00000547102 PTPRGP23470 1445 aa18.08■□□□□ 0.49
LINC00661-202ENST00000547102 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.49
LINC00661-202ENST00000547102 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
LINC00661-202ENST00000547102 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
LINC00661-202ENST00000547102 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
LINC00661-202ENST00000547102 UGGT2Q9NYU1 1516 aa18.05■□□□□ 0.48
LINC00661-202ENST00000547102 DISP1Q96F81 1524 aa18.03■□□□□ 0.48
LINC00661-202ENST00000547102 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
LINC00661-202ENST00000547102 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.48
LINC00661-202ENST00000547102 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
LINC00661-202ENST00000547102 ABCC10Q5T3U5 1492 aa17.99■□□□□ 0.47
LINC00661-202ENST00000547102 ABCC2Q92887 1545 aa17.98■□□□□ 0.47
LINC00661-202ENST00000547102 EEA1Q15075 1411 aa17.98■□□□□ 0.47
LINC00661-202ENST00000547102 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
LINC00661-202ENST00000547102 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
LINC00661-202ENST00000547102 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
LINC00661-202ENST00000547102 UHRF1BP1LA0JNW5 1464 aa17.95■□□□□ 0.46
LINC00661-202ENST00000547102 FAM69CQ0P6D2 419 aa17.95■□□□□ 0.46
LINC00661-202ENST00000547102 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
LINC00661-202ENST00000547102 PLB1Q6P1J6 1458 aa17.88■□□□□ 0.45
LINC00661-202ENST00000547102 ASXL2Q76L83 1435 aa17.88■□□□□ 0.45
LINC00661-202ENST00000547102 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
LINC00661-202ENST00000547102 ZCCHC11Q5TAX3 1644 aaKnown RBP17.85■□□□□ 0.45
LINC00661-202ENST00000547102 FAM9AQ8IZU1 332 aaPredicted RBP17.85■□□□□ 0.45
LINC00661-202ENST00000547102 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
LINC00661-202ENST00000547102 ABCA8O94911 1581 aa17.81■□□□□ 0.44
LINC00661-202ENST00000547102 GLI2P10070 1586 aa17.81■□□□□ 0.44
LINC00661-202ENST00000547102 KIF21BO75037 1637 aa17.8■□□□□ 0.44
LINC00661-202ENST00000547102 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
LINC00661-202ENST00000547102 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
LINC00661-202ENST00000547102 KDM6BO15054 1643 aa17.77■□□□□ 0.44
LINC00661-202ENST00000547102 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.43
LINC00661-202ENST00000547102 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
LINC00661-202ENST00000547102 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
LINC00661-202ENST00000547102 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
LINC00661-202ENST00000547102 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
LINC00661-202ENST00000547102 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.42
LINC00661-202ENST00000547102 EFCAB5A4FU69 1503 aa17.7■□□□□ 0.42
LINC00661-202ENST00000547102 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
LINC00661-202ENST00000547102 RAPGEF6Q8TEU7 1601 aa17.69■□□□□ 0.42
LINC00661-202ENST00000547102 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
LINC00661-202ENST00000547102 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
LINC00661-202ENST00000547102 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
LINC00661-202ENST00000547102 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
LINC00661-202ENST00000547102 CFAP43Q8NDM7 1665 aa17.65■□□□□ 0.42
LINC00661-202ENST00000547102 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
LINC00661-202ENST00000547102 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
LINC00661-202ENST00000547102 ATP10BO94823 1461 aa17.63■□□□□ 0.41
LINC00661-202ENST00000547102 CD109Q6YHK3 1445 aa17.61■□□□□ 0.41
LINC00661-202ENST00000547102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
LINC00661-202ENST00000547102 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
LINC00661-202ENST00000547102 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
LINC00661-202ENST00000547102 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
LINC00661-202ENST00000547102 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
LINC00661-202ENST00000547102 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
LINC00661-202ENST00000547102 COL17A1Q9UMD9 1497 aaPredicted RBP17.52■□□□□ 0.4
LINC00661-202ENST00000547102 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
LINC00661-202ENST00000547102 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
LINC00661-202ENST00000547102 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
LINC00661-202ENST00000547102 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
LINC00661-202ENST00000547102 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
LINC00661-202ENST00000547102 ATP1B4Q9UN42 357 aaPredicted RBP17.45■□□□□ 0.38
LINC00661-202ENST00000547102 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
LINC00661-202ENST00000547102 NEO1Q92859 1461 aa17.44■□□□□ 0.38
LINC00661-202ENST00000547102 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
LINC00661-202ENST00000547102 ADGRL1O94910 1474 aa17.39■□□□□ 0.37
LINC00661-202ENST00000547102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC00661-202ENST00000547102 KDM4FA0A1W2PPD8 638 aa17.39■□□□□ 0.37
LINC00661-202ENST00000547102 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
LINC00661-202ENST00000547102 TTC37Q6PGP7 1564 aa17.39■□□□□ 0.37
LINC00661-202ENST00000547102 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
LINC00661-202ENST00000547102 CLIP1P30622 1438 aa17.35■□□□□ 0.37
LINC00661-202ENST00000547102 FANCAO15360 1455 aa17.35■□□□□ 0.37
LINC00661-202ENST00000547102 KIF14Q15058 1648 aa17.35■□□□□ 0.37
LINC00661-202ENST00000547102 CCDC18Q5T9S5 1454 aa17.34■□□□□ 0.37
LINC00661-202ENST00000547102 CASKIN1Q8WXD9 1431 aa17.33■□□□□ 0.36
LINC00661-202ENST00000547102 TROQ12816 1431 aaPredicted RBP17.32■□□□□ 0.36
LINC00661-202ENST00000547102 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
LINC00661-202ENST00000547102 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
LINC00661-202ENST00000547102 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
LINC00661-202ENST00000547102 AKNAQ7Z591 1439 aa17.31■□□□□ 0.36
LINC00661-202ENST00000547102 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
LINC00661-202ENST00000547102 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
LINC00661-202ENST00000547102 MYO5CQ9NQX4 1742 aa17.3■□□□□ 0.36
LINC00661-202ENST00000547102 PLCH2O75038 1416 aa17.28■□□□□ 0.36
LINC00661-202ENST00000547102 RICTORQ6R327 1708 aa17.27■□□□□ 0.36
LINC00661-202ENST00000547102 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
LINC00661-202ENST00000547102 EFCAB2Q5VUJ9 269 aa17.24■□□□□ 0.35
LINC00661-202ENST00000547102 ARHGAP5Q13017 1502 aa17.23■□□□□ 0.35
LINC00661-202ENST00000547102 ZMYM4Q5VZL5 1548 aa17.22■□□□□ 0.35
LINC00661-202ENST00000547102 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms