RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 KIF27Q86VH2 1401 aa35.07■■■■□ 3.21
SCN8A-204ENST00000546961 NPM1P06748 294 aaKnown RBP eCLIP35.04■■■■□ 3.2
SCN8A-204ENST00000546961 RUSC2Q8N2Y8 1516 aa35■■■■□ 3.19
SCN8A-204ENST00000546961 KIAA0586Q9BVV6 1533 aa34.96■■■■□ 3.19
SCN8A-204ENST00000546961 FAM69CQ0P6D2 419 aa34.92■■■■□ 3.18
SCN8A-204ENST00000546961 CARMIL1Q5VZK9 1371 aa34.89■■■■□ 3.18
SCN8A-204ENST00000546961 CUL7Q14999 1698 aa34.84■■■■□ 3.17
SCN8A-204ENST00000546961 TTBK1Q5TCY1 1321 aaPredicted RBP34.82■■■■□ 3.17
SCN8A-204ENST00000546961 KIF13AQ9H1H9 1805 aa34.81■■■■□ 3.16
SCN8A-204ENST00000546961 ABCC10Q5T3U5 1492 aa34.78■■■■□ 3.16
SCN8A-204ENST00000546961 PTPRGP23470 1445 aa34.75■■■■□ 3.15
SCN8A-204ENST00000546961 ADCY10Q96PN6 1610 aa34.74■■■■□ 3.15
SCN8A-204ENST00000546961 MAPKBP1O60336 1514 aa34.71■■■■□ 3.15
SCN8A-204ENST00000546961 CARMIL2Q6F5E8 1435 aa34.65■■■■□ 3.14
SCN8A-204ENST00000546961 TNIKQ9UKE5 1360 aa34.63■■■■□ 3.13
SCN8A-204ENST00000546961 DIP2BQ9P265 1576 aa34.59■■■■□ 3.13
SCN8A-204ENST00000546961 IQGAP2Q13576 1575 aa34.53■■■■□ 3.12
SCN8A-204ENST00000546961 RAPGEF2Q9Y4G8 1499 aa34.49■■■■□ 3.11
SCN8A-204ENST00000546961 ABCC2Q92887 1545 aa34.46■■■■□ 3.11
SCN8A-204ENST00000546961 UACAQ9BZF9 1416 aa34.43■■■■□ 3.1
SCN8A-204ENST00000546961 DISP1Q96F81 1524 aa34.42■■■■□ 3.1
SCN8A-204ENST00000546961 ASXL2Q76L83 1435 aa34.41■■■■□ 3.1
SCN8A-204ENST00000546961 TSPOAP1O95153 1857 aa34.41■■■■□ 3.1
SCN8A-204ENST00000546961 UHRF1BP1LA0JNW5 1464 aa34.37■■■■□ 3.09
SCN8A-204ENST00000546961 PLB1Q6P1J6 1458 aa34.37■■■■□ 3.09
SCN8A-204ENST00000546961 KDM6BO15054 1643 aa34.35■■■■□ 3.09
SCN8A-204ENST00000546961 UGGT2Q9NYU1 1516 aa34.33■■■■□ 3.09
SCN8A-204ENST00000546961 KDM4FA0A1W2PPD8 638 aa34.24■■■■□ 3.07
SCN8A-204ENST00000546961 KDM5BQ9UGL1 1544 aa34.22■■■■□ 3.07
SCN8A-204ENST00000546961 GLI2P10070 1586 aa34.21■■■■□ 3.07
SCN8A-204ENST00000546961 KIAA0556O60303 1618 aa34.19■■■■□ 3.06
SCN8A-204ENST00000546961 EPRSP07814 1512 aaKnown RBP34.16■■■■□ 3.06
SCN8A-204ENST00000546961 GOLGA3Q08378 1498 aa34.09■■■■□ 3.05
SCN8A-204ENST00000546961 ZCCHC11Q5TAX3 1644 aaKnown RBP34.09■■■■□ 3.05
SCN8A-204ENST00000546961 PPRC1Q5VV67 1664 aaKnown RBP34.09■■■■□ 3.05
SCN8A-204ENST00000546961 PRXQ9BXM0 1461 aa34.08■■■■□ 3.05
SCN8A-204ENST00000546961 KCNH8Q96L42 1107 aa34.07■■■■□ 3.04
SCN8A-204ENST00000546961 COL17A1Q9UMD9 1497 aaPredicted RBP34.03■■■■□ 3.04
SCN8A-204ENST00000546961 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
SCN8A-204ENST00000546961 P3H3Q8IVL6 736 aa34.01■■■■□ 3.03
SCN8A-204ENST00000546961 WDR7Q9Y4E6 1490 aa34.01■■■■□ 3.03
SCN8A-204ENST00000546961 FAM9AQ8IZU1 332 aaPredicted RBP34■■■■□ 3.03
SCN8A-204ENST00000546961 TEX14Q8IWB6 1497 aa33.99■■■■□ 3.03
SCN8A-204ENST00000546961 MAP3K4Q9Y6R4 1608 aa33.98■■■■□ 3.03
SCN8A-204ENST00000546961 CSRNP3Q8WYN3 585 aa33.97■■■■□ 3.03
SCN8A-204ENST00000546961 ARID3CA6NKF2 412 aa33.93■■■■□ 3.02
SCN8A-204ENST00000546961 ABCA8O94911 1581 aa33.93■■■■□ 3.02
SCN8A-204ENST00000546961 CD109Q6YHK3 1445 aa33.89■■■■□ 3.02
SCN8A-204ENST00000546961 ADGRL1O94910 1474 aa33.82■■■■□ 3.01
SCN8A-204ENST00000546961 RANGAP1P46060 587 aaPredicted RBP33.78■■■■□ 3
SCN8A-204ENST00000546961 MAGI3Q5TCQ9 1506 aa33.78■■■■□ 3
SCN8A-204ENST00000546961 ATP10BO94823 1461 aa33.76■■■□□ 2.99
SCN8A-204ENST00000546961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.72■■■□□ 2.99
SCN8A-204ENST00000546961 HNRNPUL2Q1KMD3 747 aaKnown RBP33.72■■■□□ 2.99
SCN8A-204ENST00000546961 CFAP43Q8NDM7 1665 aa33.71■■■□□ 2.99
SCN8A-204ENST00000546961 EEA1Q15075 1411 aa33.62■■■□□ 2.97
SCN8A-204ENST00000546961 SAMD9Q5K651 1589 aa33.6■■■□□ 2.97
SCN8A-204ENST00000546961 RAPGEF6Q8TEU7 1601 aa33.53■■■□□ 2.96
SCN8A-204ENST00000546961 ARAP3Q8WWN8 1544 aa33.52■■■□□ 2.96
SCN8A-204ENST00000546961 FHOD3Q2V2M9 1422 aa33.52■■■□□ 2.96
SCN8A-204ENST00000546961 PHLDB1Q86UU1 1377 aa33.5■■■□□ 2.95
SCN8A-204ENST00000546961 RAPGEF3O95398 923 aa33.5■■■□□ 2.95
SCN8A-204ENST00000546961 PLEKHD1A6NEE1 506 aa33.48■■■□□ 2.95
SCN8A-204ENST00000546961 NUP153P49790 1475 aaKnown RBP33.46■■■□□ 2.95
SCN8A-204ENST00000546961 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
SCN8A-204ENST00000546961 EHMT2Q96KQ7 1210 aa33.44■■■□□ 2.94
SCN8A-204ENST00000546961 NEO1Q92859 1461 aa33.37■■■□□ 2.93
SCN8A-204ENST00000546961 KIF21BO75037 1637 aa33.36■■■□□ 2.93
SCN8A-204ENST00000546961 UBTFP17480 764 aaKnown RBP33.36■■■□□ 2.93
SCN8A-204ENST00000546961 HECW2Q9P2P5 1572 aa33.34■■■□□ 2.93
SCN8A-204ENST00000546961 ILDR1Q86SU0 546 aaPredicted RBP33.33■■■□□ 2.93
SCN8A-204ENST00000546961 ARID4BQ4LE39 1312 aaPredicted RBP33.29■■■□□ 2.92
SCN8A-204ENST00000546961 ATP1B4Q9UN42 357 aaPredicted RBP33.28■■■□□ 2.92
SCN8A-204ENST00000546961 EFCAB5A4FU69 1503 aa33.26■■■□□ 2.91
SCN8A-204ENST00000546961 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
SCN8A-204ENST00000546961 AKNAQ7Z591 1439 aa33.21■■■□□ 2.91
SCN8A-204ENST00000546961 DENND4BO75064 1496 aaPredicted RBP33.19■■■□□ 2.9
SCN8A-204ENST00000546961 FANCAO15360 1455 aa33.17■■■□□ 2.9
SCN8A-204ENST00000546961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.16■■■□□ 2.9
SCN8A-204ENST00000546961 FRMPD1Q5SYB0 1578 aa33.15■■■□□ 2.9
SCN8A-204ENST00000546961 PTPRMP28827 1452 aa33.14■■■□□ 2.9
SCN8A-204ENST00000546961 CDK13Q14004 1512 aaKnown RBP33.13■■■□□ 2.89
SCN8A-204ENST00000546961 ADAMTSL3P82987 1691 aa33.1■■■□□ 2.89
SCN8A-204ENST00000546961 CDK11AQ9UQ88 783 aaPredicted RBP33.08■■■□□ 2.89
SCN8A-204ENST00000546961 FMN1Q68DA7 1419 aa33.07■■■□□ 2.88
SCN8A-204ENST00000546961 TTC37Q6PGP7 1564 aa33.06■■■□□ 2.88
SCN8A-204ENST00000546961 ARHGAP35Q9NRY4 1499 aa33.04■■■□□ 2.88
SCN8A-204ENST00000546961 PLCH2O75038 1416 aa33.02■■■□□ 2.88
SCN8A-204ENST00000546961 EFCAB2Q5VUJ9 269 aa33.01■■■□□ 2.87
SCN8A-204ENST00000546961 BCORL1Q5H9F3 1711 aa33.01■■■□□ 2.87
SCN8A-204ENST00000546961 SCAPERQ9BY12 1400 aa33.01■■■□□ 2.87
SCN8A-204ENST00000546961 CFAP74Q9C0B2 1584 aa33■■■□□ 2.87
SCN8A-204ENST00000546961 RICTORQ6R327 1708 aa33■■■□□ 2.87
SCN8A-204ENST00000546961 PLPPR3Q6T4P5 718 aa33■■■□□ 2.87
SCN8A-204ENST00000546961 ARHGEF40Q8TER5 1519 aa32.97■■■□□ 2.87
SCN8A-204ENST00000546961 YEATS2Q9ULM3 1422 aa32.96■■■□□ 2.87
SCN8A-204ENST00000546961 MADDQ8WXG6 1647 aa32.96■■■□□ 2.87
SCN8A-204ENST00000546961 MLECQ14165 292 aa32.96■■■□□ 2.87
SCN8A-204ENST00000546961 POGZQ7Z3K3 1410 aa32.94■■■□□ 2.86
SCN8A-204ENST00000546961 HECW1Q76N89 1606 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms