RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 KIAA0586Q9BVV6 1533 aa27.04■■□□□ 1.92
DDX54-204ENST00000546898 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
DDX54-204ENST00000546898 JPH4Q96JJ6 628 aa26.97■■□□□ 1.91
DDX54-204ENST00000546898 RAPGEF2Q9Y4G8 1499 aa26.95■■□□□ 1.91
DDX54-204ENST00000546898 IQGAP2Q13576 1575 aa26.9■■□□□ 1.9
DDX54-204ENST00000546898 CTTNBP2Q8WZ74 1663 aa26.83■■□□□ 1.89
DDX54-204ENST00000546898 PRXQ9BXM0 1461 aa26.82■■□□□ 1.88
DDX54-204ENST00000546898 EEA1Q15075 1411 aa26.79■■□□□ 1.88
DDX54-204ENST00000546898 CARMIL2Q6F5E8 1435 aa26.75■■□□□ 1.87
DDX54-204ENST00000546898 UGGT2Q9NYU1 1516 aa26.74■■□□□ 1.87
DDX54-204ENST00000546898 TRHP20396 242 aaPredicted RBP26.71■■□□□ 1.87
DDX54-204ENST00000546898 DISP1Q96F81 1524 aa26.68■■□□□ 1.86
DDX54-204ENST00000546898 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
DDX54-204ENST00000546898 ADCY10Q96PN6 1610 aa26.66■■□□□ 1.86
DDX54-204ENST00000546898 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
DDX54-204ENST00000546898 KIAA0556O60303 1618 aa26.65■■□□□ 1.86
DDX54-204ENST00000546898 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
DDX54-204ENST00000546898 PTPRGP23470 1445 aa26.63■■□□□ 1.85
DDX54-204ENST00000546898 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
DDX54-204ENST00000546898 KIF21BO75037 1637 aa26.56■■□□□ 1.84
DDX54-204ENST00000546898 MAPKBP1O60336 1514 aa26.55■■□□□ 1.84
DDX54-204ENST00000546898 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
DDX54-204ENST00000546898 KIF13AQ9H1H9 1805 aa26.51■■□□□ 1.83
DDX54-204ENST00000546898 UHRF1BP1LA0JNW5 1464 aa26.5■■□□□ 1.83
DDX54-204ENST00000546898 ABCC2Q92887 1545 aa26.48■■□□□ 1.83
DDX54-204ENST00000546898 UACAQ9BZF9 1416 aa26.48■■□□□ 1.83
DDX54-204ENST00000546898 FAM9AQ8IZU1 332 aaPredicted RBP26.47■■□□□ 1.83
DDX54-204ENST00000546898 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
DDX54-204ENST00000546898 SAMD9Q5K651 1589 aa26.43■■□□□ 1.82
DDX54-204ENST00000546898 ABCC10Q5T3U5 1492 aa26.41■■□□□ 1.82
DDX54-204ENST00000546898 DIP2BQ9P265 1576 aa26.41■■□□□ 1.82
DDX54-204ENST00000546898 KDM5BQ9UGL1 1544 aa26.37■■□□□ 1.81
DDX54-204ENST00000546898 ABCA8O94911 1581 aa26.36■■□□□ 1.81
DDX54-204ENST00000546898 ZCCHC11Q5TAX3 1644 aaKnown RBP26.35■■□□□ 1.81
DDX54-204ENST00000546898 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
DDX54-204ENST00000546898 ASXL2Q76L83 1435 aa26.29■■□□□ 1.8
DDX54-204ENST00000546898 EFCAB5A4FU69 1503 aa26.28■■□□□ 1.8
DDX54-204ENST00000546898 FAM69CQ0P6D2 419 aa26.27■■□□□ 1.8
DDX54-204ENST00000546898 GLI2P10070 1586 aa26.24■■□□□ 1.79
DDX54-204ENST00000546898 P3H3Q8IVL6 736 aa26.21■■□□□ 1.79
DDX54-204ENST00000546898 RAPGEF6Q8TEU7 1601 aa26.2■■□□□ 1.78
DDX54-204ENST00000546898 TSPOAP1O95153 1857 aa26.18■■□□□ 1.78
DDX54-204ENST00000546898 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
DDX54-204ENST00000546898 FHOD3Q2V2M9 1422 aa26.16■■□□□ 1.78
DDX54-204ENST00000546898 WDR7Q9Y4E6 1490 aa26.16■■□□□ 1.78
DDX54-204ENST00000546898 EPRSP07814 1512 aaKnown RBP26.15■■□□□ 1.78
DDX54-204ENST00000546898 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
DDX54-204ENST00000546898 MAP3K4Q9Y6R4 1608 aa26.11■■□□□ 1.77
DDX54-204ENST00000546898 PPRC1Q5VV67 1664 aaKnown RBP26.09■■□□□ 1.77
DDX54-204ENST00000546898 EHMT2Q96KQ7 1210 aa26.09■■□□□ 1.77
DDX54-204ENST00000546898 ATP10BO94823 1461 aa26.07■■□□□ 1.76
DDX54-204ENST00000546898 CFAP43Q8NDM7 1665 aa26.05■■□□□ 1.76
DDX54-204ENST00000546898 NUP153P49790 1475 aaKnown RBP26.04■■□□□ 1.76
DDX54-204ENST00000546898 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
DDX54-204ENST00000546898 KDM6BO15054 1643 aa26.03■■□□□ 1.76
DDX54-204ENST00000546898 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
DDX54-204ENST00000546898 FMN1Q68DA7 1419 aa25.99■■□□□ 1.75
DDX54-204ENST00000546898 TEX14Q8IWB6 1497 aa25.98■■□□□ 1.75
DDX54-204ENST00000546898 ARID3CA6NKF2 412 aa25.95■■□□□ 1.74
DDX54-204ENST00000546898 HECW1Q76N89 1606 aa25.95■■□□□ 1.74
DDX54-204ENST00000546898 ABCA9Q8IUA7 1624 aa25.92■■□□□ 1.74
DDX54-204ENST00000546898 MAGI3Q5TCQ9 1506 aa25.91■■□□□ 1.74
DDX54-204ENST00000546898 KCNH8Q96L42 1107 aa25.9■■□□□ 1.74
DDX54-204ENST00000546898 CD109Q6YHK3 1445 aa25.89■■□□□ 1.74
DDX54-204ENST00000546898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
DDX54-204ENST00000546898 HNRNPUL2Q1KMD3 747 aaKnown RBP25.88■■□□□ 1.73
DDX54-204ENST00000546898 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
DDX54-204ENST00000546898 CLIP1P30622 1438 aa25.82■■□□□ 1.72
DDX54-204ENST00000546898 PLEKHD1A6NEE1 506 aa25.8■■□□□ 1.72
DDX54-204ENST00000546898 LRRIQ1Q96JM4 1722 aa25.8■■□□□ 1.72
DDX54-204ENST00000546898 PCF11O94913 1555 aaKnown RBP25.79■■□□□ 1.72
DDX54-204ENST00000546898 COL17A1Q9UMD9 1497 aaPredicted RBP25.75■■□□□ 1.71
DDX54-204ENST00000546898 CASKIN1Q8WXD9 1431 aa25.75■■□□□ 1.71
DDX54-204ENST00000546898 ATP1B4Q9UN42 357 aaPredicted RBP25.72■■□□□ 1.71
DDX54-204ENST00000546898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.72■■□□□ 1.71
DDX54-204ENST00000546898 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
DDX54-204ENST00000546898 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
DDX54-204ENST00000546898 TTC37Q6PGP7 1564 aa25.7■■□□□ 1.71
DDX54-204ENST00000546898 NEO1Q92859 1461 aa25.7■■□□□ 1.7
DDX54-204ENST00000546898 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
DDX54-204ENST00000546898 ARAP3Q8WWN8 1544 aa25.69■■□□□ 1.7
DDX54-204ENST00000546898 CFAP74Q9C0B2 1584 aa25.69■■□□□ 1.7
DDX54-204ENST00000546898 CDK11AQ9UQ88 783 aaPredicted RBP25.68■■□□□ 1.7
DDX54-204ENST00000546898 CEP162Q5TB80 1403 aa25.66■■□□□ 1.7
DDX54-204ENST00000546898 KIF14Q15058 1648 aa25.66■■□□□ 1.7
DDX54-204ENST00000546898 TROQ12816 1431 aaPredicted RBP25.63■■□□□ 1.69
DDX54-204ENST00000546898 MYO5CQ9NQX4 1742 aa25.63■■□□□ 1.69
DDX54-204ENST00000546898 FANCAO15360 1455 aa25.58■■□□□ 1.69
DDX54-204ENST00000546898 PLCH2O75038 1416 aa25.54■■□□□ 1.68
DDX54-204ENST00000546898 AKNAQ7Z591 1439 aa25.53■■□□□ 1.68
DDX54-204ENST00000546898 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
DDX54-204ENST00000546898 RICTORQ6R327 1708 aa25.52■■□□□ 1.68
DDX54-204ENST00000546898 LOC105371045A0A1W2PR82 267 aa25.49■■□□□ 1.67
DDX54-204ENST00000546898 PREX2Q70Z35 1606 aa25.48■■□□□ 1.67
DDX54-204ENST00000546898 DENND4BO75064 1496 aaPredicted RBP25.47■■□□□ 1.67
DDX54-204ENST00000546898 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
DDX54-204ENST00000546898 ADGRL1O94910 1474 aa25.45■■□□□ 1.66
DDX54-204ENST00000546898 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
DDX54-204ENST00000546898 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
DDX54-204ENST00000546898 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms