RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
RAB5C-203ENST00000546881 IGF1RP08069 1367 aa20.06■□□□□ 0.8
RAB5C-203ENST00000546881 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
RAB5C-203ENST00000546881 KIF13AQ9H1H9 1805 aa20.04■□□□□ 0.8
RAB5C-203ENST00000546881 CUL7Q14999 1698 aa20.04■□□□□ 0.8
RAB5C-203ENST00000546881 KIAA0586Q9BVV6 1533 aa20.02■□□□□ 0.79
RAB5C-203ENST00000546881 FAM69CQ0P6D2 419 aa19.99■□□□□ 0.79
RAB5C-203ENST00000546881 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
RAB5C-203ENST00000546881 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
RAB5C-203ENST00000546881 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
RAB5C-203ENST00000546881 ABCC10Q5T3U5 1492 aa19.94■□□□□ 0.78
RAB5C-203ENST00000546881 MAPKBP1O60336 1514 aa19.93■□□□□ 0.78
RAB5C-203ENST00000546881 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
RAB5C-203ENST00000546881 PTPRGP23470 1445 aa19.88■□□□□ 0.77
RAB5C-203ENST00000546881 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
RAB5C-203ENST00000546881 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
RAB5C-203ENST00000546881 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.77
RAB5C-203ENST00000546881 TSPOAP1O95153 1857 aa19.82■□□□□ 0.76
RAB5C-203ENST00000546881 KDM6BO15054 1643 aa19.78■□□□□ 0.76
RAB5C-203ENST00000546881 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
RAB5C-203ENST00000546881 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
RAB5C-203ENST00000546881 DISP1Q96F81 1524 aa19.73■□□□□ 0.75
RAB5C-203ENST00000546881 ASXL2Q76L83 1435 aa19.73■□□□□ 0.75
RAB5C-203ENST00000546881 UACAQ9BZF9 1416 aa19.72■□□□□ 0.75
RAB5C-203ENST00000546881 PLB1Q6P1J6 1458 aa19.7■□□□□ 0.74
RAB5C-203ENST00000546881 UHRF1BP1LA0JNW5 1464 aa19.69■□□□□ 0.74
RAB5C-203ENST00000546881 UGGT2Q9NYU1 1516 aa19.68■□□□□ 0.74
RAB5C-203ENST00000546881 KIAA0556O60303 1618 aa19.66■□□□□ 0.74
RAB5C-203ENST00000546881 GLI2P10070 1586 aa19.64■□□□□ 0.73
RAB5C-203ENST00000546881 ZCCHC11Q5TAX3 1644 aaKnown RBP19.62■□□□□ 0.73
RAB5C-203ENST00000546881 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
RAB5C-203ENST00000546881 PPRC1Q5VV67 1664 aaKnown RBP19.61■□□□□ 0.73
RAB5C-203ENST00000546881 CTTNBP2Q8WZ74 1663 aa19.61■□□□□ 0.73
RAB5C-203ENST00000546881 KDM4FA0A1W2PPD8 638 aa19.59■□□□□ 0.73
RAB5C-203ENST00000546881 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
RAB5C-203ENST00000546881 MAP3K4Q9Y6R4 1608 aa19.54■□□□□ 0.72
RAB5C-203ENST00000546881 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
RAB5C-203ENST00000546881 TEX14Q8IWB6 1497 aa19.52■□□□□ 0.72
RAB5C-203ENST00000546881 WDR7Q9Y4E6 1490 aa19.52■□□□□ 0.72
RAB5C-203ENST00000546881 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
RAB5C-203ENST00000546881 COL17A1Q9UMD9 1497 aaPredicted RBP19.49■□□□□ 0.71
RAB5C-203ENST00000546881 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
RAB5C-203ENST00000546881 ABCA8O94911 1581 aa19.47■□□□□ 0.71
RAB5C-203ENST00000546881 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
RAB5C-203ENST00000546881 ADGRL1O94910 1474 aa19.45■□□□□ 0.7
RAB5C-203ENST00000546881 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
RAB5C-203ENST00000546881 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
RAB5C-203ENST00000546881 CD109Q6YHK3 1445 aa19.42■□□□□ 0.7
RAB5C-203ENST00000546881 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
RAB5C-203ENST00000546881 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
RAB5C-203ENST00000546881 MAGI3Q5TCQ9 1506 aa19.36■□□□□ 0.69
RAB5C-203ENST00000546881 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
RAB5C-203ENST00000546881 ATP10BO94823 1461 aa19.31■□□□□ 0.68
RAB5C-203ENST00000546881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
RAB5C-203ENST00000546881 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
RAB5C-203ENST00000546881 SAMD9Q5K651 1589 aa19.3■□□□□ 0.68
RAB5C-203ENST00000546881 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
RAB5C-203ENST00000546881 EEA1Q15075 1411 aa19.24■□□□□ 0.67
RAB5C-203ENST00000546881 KIF21BO75037 1637 aa19.23■□□□□ 0.67
RAB5C-203ENST00000546881 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
RAB5C-203ENST00000546881 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
RAB5C-203ENST00000546881 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
RAB5C-203ENST00000546881 HECW2Q9P2P5 1572 aa19.2■□□□□ 0.66
RAB5C-203ENST00000546881 NUP153P49790 1475 aaKnown RBP19.18■□□□□ 0.66
RAB5C-203ENST00000546881 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
RAB5C-203ENST00000546881 PHLDB1Q86UU1 1377 aa19.16■□□□□ 0.66
RAB5C-203ENST00000546881 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
RAB5C-203ENST00000546881 NEO1Q92859 1461 aa19.14■□□□□ 0.65
RAB5C-203ENST00000546881 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
RAB5C-203ENST00000546881 ILDR1Q86SU0 546 aaPredicted RBP19.12■□□□□ 0.65
RAB5C-203ENST00000546881 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
RAB5C-203ENST00000546881 ARID4BQ4LE39 1312 aaPredicted RBP19.08■□□□□ 0.65
RAB5C-203ENST00000546881 FRMPD1Q5SYB0 1578 aa19.07■□□□□ 0.64
RAB5C-203ENST00000546881 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
RAB5C-203ENST00000546881 ATP1B4Q9UN42 357 aaPredicted RBP19.04■□□□□ 0.64
RAB5C-203ENST00000546881 CDK13Q14004 1512 aaKnown RBP19.03■□□□□ 0.64
RAB5C-203ENST00000546881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.03■□□□□ 0.64
RAB5C-203ENST00000546881 FANCAO15360 1455 aa19.03■□□□□ 0.64
RAB5C-203ENST00000546881 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
RAB5C-203ENST00000546881 ADAMTSL3P82987 1691 aa19.02■□□□□ 0.64
RAB5C-203ENST00000546881 AKNAQ7Z591 1439 aa19.02■□□□□ 0.64
RAB5C-203ENST00000546881 PTPRMP28827 1452 aa19.02■□□□□ 0.63
RAB5C-203ENST00000546881 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.63
RAB5C-203ENST00000546881 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.63
RAB5C-203ENST00000546881 BCORL1Q5H9F3 1711 aa19■□□□□ 0.63
RAB5C-203ENST00000546881 ARHGEF40Q8TER5 1519 aa18.99■□□□□ 0.63
RAB5C-203ENST00000546881 RICTORQ6R327 1708 aa18.98■□□□□ 0.63
RAB5C-203ENST00000546881 MADDQ8WXG6 1647 aa18.98■□□□□ 0.63
RAB5C-203ENST00000546881 FMN1Q68DA7 1419 aa18.94■□□□□ 0.62
RAB5C-203ENST00000546881 HECW1Q76N89 1606 aa18.94■□□□□ 0.62
RAB5C-203ENST00000546881 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
RAB5C-203ENST00000546881 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
RAB5C-203ENST00000546881 RIMS1Q86UR5 1692 aaKnown RBP18.92■□□□□ 0.62
RAB5C-203ENST00000546881 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
RAB5C-203ENST00000546881 ZFYVE16Q7Z3T8 1539 aa18.92■□□□□ 0.62
RAB5C-203ENST00000546881 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
RAB5C-203ENST00000546881 ZMYM4Q5VZL5 1548 aa18.9■□□□□ 0.62
RAB5C-203ENST00000546881 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
RAB5C-203ENST00000546881 PLCH2O75038 1416 aa18.9■□□□□ 0.62
RAB5C-203ENST00000546881 POGZQ7Z3K3 1410 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms