RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
KDM1B-203ENST00000546309 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
KDM1B-203ENST00000546309 CHIC1Q5VXU3 224 aa13.07□□□□□ -0.32
KDM1B-203ENST00000546309 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
KDM1B-203ENST00000546309 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
KDM1B-203ENST00000546309 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
KDM1B-203ENST00000546309 CUL7Q14999 1698 aa13□□□□□ -0.33
KDM1B-203ENST00000546309 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
KDM1B-203ENST00000546309 DIP2BQ9P265 1576 aa12.96□□□□□ -0.33
KDM1B-203ENST00000546309 DISP1Q96F81 1524 aa12.96□□□□□ -0.33
KDM1B-203ENST00000546309 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
KDM1B-203ENST00000546309 MAPKBP1O60336 1514 aa12.95□□□□□ -0.34
KDM1B-203ENST00000546309 PPRC1Q5VV67 1664 aaKnown RBP12.91□□□□□ -0.34
KDM1B-203ENST00000546309 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
KDM1B-203ENST00000546309 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
KDM1B-203ENST00000546309 ABCC2Q92887 1545 aa12.88□□□□□ -0.35
KDM1B-203ENST00000546309 PTPRGP23470 1445 aa12.88□□□□□ -0.35
KDM1B-203ENST00000546309 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
KDM1B-203ENST00000546309 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
KDM1B-203ENST00000546309 COL17A1Q9UMD9 1497 aaPredicted RBP12.86□□□□□ -0.35
KDM1B-203ENST00000546309 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
KDM1B-203ENST00000546309 TNIKQ9UKE5 1360 aa12.84□□□□□ -0.35
KDM1B-203ENST00000546309 UHRF1BP1LA0JNW5 1464 aa12.84□□□□□ -0.35
KDM1B-203ENST00000546309 PRXQ9BXM0 1461 aa12.84□□□□□ -0.35
KDM1B-203ENST00000546309 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
KDM1B-203ENST00000546309 TTBK1Q5TCY1 1321 aaPredicted RBP12.83□□□□□ -0.36
KDM1B-203ENST00000546309 ASXL2Q76L83 1435 aa12.82□□□□□ -0.36
KDM1B-203ENST00000546309 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
KDM1B-203ENST00000546309 KDM5BQ9UGL1 1544 aa12.81□□□□□ -0.36
KDM1B-203ENST00000546309 KDM4FA0A1W2PPD8 638 aa12.8□□□□□ -0.36
KDM1B-203ENST00000546309 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
KDM1B-203ENST00000546309 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
KDM1B-203ENST00000546309 GLI2P10070 1586 aa12.78□□□□□ -0.36
KDM1B-203ENST00000546309 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
KDM1B-203ENST00000546309 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.36
KDM1B-203ENST00000546309 EPRSP07814 1512 aaKnown RBP12.76□□□□□ -0.37
KDM1B-203ENST00000546309 ABCA8O94911 1581 aa12.76□□□□□ -0.37
KDM1B-203ENST00000546309 MAP3K4Q9Y6R4 1608 aa12.76□□□□□ -0.37
KDM1B-203ENST00000546309 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
KDM1B-203ENST00000546309 KDM6BO15054 1643 aa12.74□□□□□ -0.37
KDM1B-203ENST00000546309 SAMD9Q5K651 1589 aa12.66□□□□□ -0.38
KDM1B-203ENST00000546309 ATP10BO94823 1461 aa12.65□□□□□ -0.38
KDM1B-203ENST00000546309 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
KDM1B-203ENST00000546309 EEA1Q15075 1411 aa12.65□□□□□ -0.38
KDM1B-203ENST00000546309 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
KDM1B-203ENST00000546309 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
KDM1B-203ENST00000546309 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
KDM1B-203ENST00000546309 MAGI3Q5TCQ9 1506 aa12.59□□□□□ -0.39
KDM1B-203ENST00000546309 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
KDM1B-203ENST00000546309 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
KDM1B-203ENST00000546309 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
KDM1B-203ENST00000546309 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
KDM1B-203ENST00000546309 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
KDM1B-203ENST00000546309 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
KDM1B-203ENST00000546309 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
KDM1B-203ENST00000546309 FAM9AQ8IZU1 332 aaPredicted RBP12.54□□□□□ -0.4
KDM1B-203ENST00000546309 ABCA9Q8IUA7 1624 aa12.54□□□□□ -0.4
KDM1B-203ENST00000546309 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
KDM1B-203ENST00000546309 FRMPD1Q5SYB0 1578 aa12.53□□□□□ -0.4
KDM1B-203ENST00000546309 TEX14Q8IWB6 1497 aa12.51□□□□□ -0.41
KDM1B-203ENST00000546309 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
KDM1B-203ENST00000546309 KIF21BO75037 1637 aa12.51□□□□□ -0.41
KDM1B-203ENST00000546309 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
KDM1B-203ENST00000546309 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
KDM1B-203ENST00000546309 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
KDM1B-203ENST00000546309 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
KDM1B-203ENST00000546309 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
KDM1B-203ENST00000546309 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
KDM1B-203ENST00000546309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■■■□ 23.9
KDM1B-203ENST00000546309 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
KDM1B-203ENST00000546309 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
KDM1B-203ENST00000546309 ADAMTSL3P82987 1691 aa12.43□□□□□ -0.42
KDM1B-203ENST00000546309 HECW2Q9P2P5 1572 aa12.43□□□□□ -0.42
KDM1B-203ENST00000546309 RICTORQ6R327 1708 aa12.42□□□□□ -0.42
KDM1B-203ENST00000546309 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
KDM1B-203ENST00000546309 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
KDM1B-203ENST00000546309 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
KDM1B-203ENST00000546309 NEO1Q92859 1461 aa12.39□□□□□ -0.43
KDM1B-203ENST00000546309 KIF14Q15058 1648 aa12.37□□□□□ -0.43
KDM1B-203ENST00000546309 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
KDM1B-203ENST00000546309 BCORL1Q5H9F3 1711 aa12.36□□□□□ -0.43
KDM1B-203ENST00000546309 AKNAQ7Z591 1439 aa12.35□□□□□ -0.43
KDM1B-203ENST00000546309 PTPRMP28827 1452 aa12.34□□□□□ -0.43
KDM1B-203ENST00000546309 MADDQ8WXG6 1647 aa12.33□□□□□ -0.43
KDM1B-203ENST00000546309 FANCAO15360 1455 aa12.33□□□□□ -0.44
KDM1B-203ENST00000546309 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
KDM1B-203ENST00000546309 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
KDM1B-203ENST00000546309 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
KDM1B-203ENST00000546309 PLCH2O75038 1416 aa12.31□□□□□ -0.44
KDM1B-203ENST00000546309 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
KDM1B-203ENST00000546309 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
KDM1B-203ENST00000546309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
KDM1B-203ENST00000546309 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
KDM1B-203ENST00000546309 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
KDM1B-203ENST00000546309 CDC42BPBQ9Y5S2 1711 aa12.29□□□□□ -0.44
KDM1B-203ENST00000546309 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
KDM1B-203ENST00000546309 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
KDM1B-203ENST00000546309 PCF11O94913 1555 aaKnown RBP12.27□□□□□ -0.44
KDM1B-203ENST00000546309 LMTK3Q96Q04 1460 aa12.27□□□□□ -0.45
KDM1B-203ENST00000546309 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms