RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
PRKAB1-209ENST00000545870 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
PRKAB1-209ENST00000545870 TIAM1Q13009 1591 aa12.44□□□□□ -0.42
PRKAB1-209ENST00000545870 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
PRKAB1-209ENST00000545870 AQRO60306 1485 aaKnown RBP eCLIP12.44□□□□□ -0.426e-7■■■□□ 18.8
PRKAB1-209ENST00000545870 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
PRKAB1-209ENST00000545870 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
PRKAB1-209ENST00000545870 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
PRKAB1-209ENST00000545870 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
PRKAB1-209ENST00000545870 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
PRKAB1-209ENST00000545870 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
PRKAB1-209ENST00000545870 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
PRKAB1-209ENST00000545870 CASKIN1Q8WXD9 1431 aa12.38□□□□□ -0.43
PRKAB1-209ENST00000545870 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
PRKAB1-209ENST00000545870 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
PRKAB1-209ENST00000545870 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
PRKAB1-209ENST00000545870 PCF11O94913 1555 aaKnown RBP12.35□□□□□ -0.43
PRKAB1-209ENST00000545870 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
PRKAB1-209ENST00000545870 DHX57Q6P158 1386 aaKnown RBP12.33□□□□□ -0.44
PRKAB1-209ENST00000545870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRKAB1-209ENST00000545870 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
PRKAB1-209ENST00000545870 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.44
PRKAB1-209ENST00000545870 THOC2Q8NI27 1593 aaKnown RBP12.32□□□□□ -0.44
PRKAB1-209ENST00000545870 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
PRKAB1-209ENST00000545870 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
PRKAB1-209ENST00000545870 FHOD3Q2V2M9 1422 aa12.3□□□□□ -0.44
PRKAB1-209ENST00000545870 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
PRKAB1-209ENST00000545870 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.44
PRKAB1-209ENST00000545870 PHLDB1Q86UU1 1377 aa12.26□□□□□ -0.45
PRKAB1-209ENST00000545870 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
PRKAB1-209ENST00000545870 IFT140Q96RY7 1462 aa12.24□□□□□ -0.45
PRKAB1-209ENST00000545870 SETD5Q9C0A6 1442 aa12.24□□□□□ -0.45
PRKAB1-209ENST00000545870 ADAMTS12P58397 1594 aa12.23□□□□□ -0.45
PRKAB1-209ENST00000545870 MSH5O43196 834 aa12.23□□□□□ -0.45
PRKAB1-209ENST00000545870 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
PRKAB1-209ENST00000545870 WDR62O43379 1518 aa12.22□□□□□ -0.45
PRKAB1-209ENST00000545870 CCDC18Q5T9S5 1454 aa12.21□□□□□ -0.45
PRKAB1-209ENST00000545870 RAB3GAP2Q9H2M9 1393 aa12.21□□□□□ -0.45
PRKAB1-209ENST00000545870 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
PRKAB1-209ENST00000545870 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
PRKAB1-209ENST00000545870 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
PRKAB1-209ENST00000545870 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
PRKAB1-209ENST00000545870 IQGAP2Q13576 1575 aa12.19□□□□□ -0.46
PRKAB1-209ENST00000545870 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
PRKAB1-209ENST00000545870 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
PRKAB1-209ENST00000545870 TIMELESSQ9UNS1 1208 aa12.17□□□□□ -0.46
PRKAB1-209ENST00000545870 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
PRKAB1-209ENST00000545870 HECW1Q76N89 1606 aa12.16□□□□□ -0.46
PRKAB1-209ENST00000545870 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.46
PRKAB1-209ENST00000545870 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
PRKAB1-209ENST00000545870 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
PRKAB1-209ENST00000545870 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
PRKAB1-209ENST00000545870 MAPKBP1O60336 1514 aa12.15□□□□□ -0.46
PRKAB1-209ENST00000545870 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
PRKAB1-209ENST00000545870 MYOM3Q5VTT5 1437 aa12.14□□□□□ -0.47
PRKAB1-209ENST00000545870 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
PRKAB1-209ENST00000545870 ITGAEP38570 1179 aa12.13□□□□□ -0.47
PRKAB1-209ENST00000545870 KIAA0586Q9BVV6 1533 aa12.12□□□□□ -0.47
PRKAB1-209ENST00000545870 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
PRKAB1-209ENST00000545870 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
PRKAB1-209ENST00000545870 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
PRKAB1-209ENST00000545870 LRRIQ1Q96JM4 1722 aa12.09□□□□□ -0.47
PRKAB1-209ENST00000545870 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
PRKAB1-209ENST00000545870 EPRSP07814 1512 aaKnown RBP12.08□□□□□ -0.48
PRKAB1-209ENST00000545870 MIA2Q96PC5 1412 aa12.08□□□□□ -0.48
PRKAB1-209ENST00000545870 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
PRKAB1-209ENST00000545870 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
PRKAB1-209ENST00000545870 EIF4G3O43432 1585 aaKnown RBP12.07□□□□□ -0.48
PRKAB1-209ENST00000545870 GRIN2AQ12879 1464 aa12.07□□□□□ -0.48
PRKAB1-209ENST00000545870 PTPN23Q9H3S7 1636 aa12.06□□□□□ -0.48
PRKAB1-209ENST00000545870 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
PRKAB1-209ENST00000545870 KIAA0556O60303 1618 aa12.05□□□□□ -0.48
PRKAB1-209ENST00000545870 ERCC6Q03468 1493 aa12.05□□□□□ -0.48
PRKAB1-209ENST00000545870 MIER1Q8N108 512 aa12.04□□□□□ -0.48
PRKAB1-209ENST00000545870 MAGI3Q5TCQ9 1506 aa12.04□□□□□ -0.48
PRKAB1-209ENST00000545870 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
PRKAB1-209ENST00000545870 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
PRKAB1-209ENST00000545870 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
PRKAB1-209ENST00000545870 NAIPQ13075 1403 aa12.03□□□□□ -0.48
PRKAB1-209ENST00000545870 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
PRKAB1-209ENST00000545870 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
PRKAB1-209ENST00000545870 RAPGEF6Q8TEU7 1601 aa11.99□□□□□ -0.49
PRKAB1-209ENST00000545870 GCC2Q8IWJ2 1684 aa11.99□□□□□ -0.49
PRKAB1-209ENST00000545870 NUP160Q12769 1436 aa11.98□□□□□ -0.49
PRKAB1-209ENST00000545870 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
PRKAB1-209ENST00000545870 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
PRKAB1-209ENST00000545870 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.49
PRKAB1-209ENST00000545870 CARMIL2Q6F5E8 1435 aa11.96□□□□□ -0.49
PRKAB1-209ENST00000545870 PPP1R15AO75807 674 aaPredicted RBP11.95□□□□□ -0.5
PRKAB1-209ENST00000545870 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
PRKAB1-209ENST00000545870 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
PRKAB1-209ENST00000545870 CHMP7Q8WUX9 453 aaPredicted RBP11.94□□□□□ -0.5
PRKAB1-209ENST00000545870 TROQ12816 1431 aaPredicted RBP11.93□□□□□ -0.5
PRKAB1-209ENST00000545870 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
PRKAB1-209ENST00000545870 PELP1Q8IZL8 1130 aaKnown RBP11.92□□□□□ -0.5
PRKAB1-209ENST00000545870 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
PRKAB1-209ENST00000545870 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
PRKAB1-209ENST00000545870 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
PRKAB1-209ENST00000545870 DAPK1P53355 1430 aa11.9□□□□□ -0.5
PRKAB1-209ENST00000545870 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms