RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
GABRB3-205ENST00000545868 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
GABRB3-205ENST00000545868 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
GABRB3-205ENST00000545868 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
GABRB3-205ENST00000545868 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
GABRB3-205ENST00000545868 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
GABRB3-205ENST00000545868 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
GABRB3-205ENST00000545868 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
GABRB3-205ENST00000545868 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
GABRB3-205ENST00000545868 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
GABRB3-205ENST00000545868 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
GABRB3-205ENST00000545868 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
GABRB3-205ENST00000545868 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-205ENST00000545868 SHROOM2Q13796 1616 aa17.39■□□□□ 0.38
GABRB3-205ENST00000545868 WRNQ14191 1432 aaPredicted RBP eCLIP17.39■□□□□ 0.38
GABRB3-205ENST00000545868 NUP160Q12769 1436 aa17.37■□□□□ 0.37
GABRB3-205ENST00000545868 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
GABRB3-205ENST00000545868 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
GABRB3-205ENST00000545868 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
GABRB3-205ENST00000545868 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-205ENST00000545868 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
GABRB3-205ENST00000545868 ZBTB22O15209 634 aa17.18■□□□□ 0.34
GABRB3-205ENST00000545868 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-205ENST00000545868 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
GABRB3-205ENST00000545868 CUL7Q14999 1698 aa17.13■□□□□ 0.33
GABRB3-205ENST00000545868 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
GABRB3-205ENST00000545868 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
GABRB3-205ENST00000545868 IGF1RP08069 1367 aa17.04■□□□□ 0.32
GABRB3-205ENST00000545868 DIP2BQ9P265 1576 aa17.03■□□□□ 0.32
GABRB3-205ENST00000545868 MAPKBP1O60336 1514 aa17.02■□□□□ 0.32
GABRB3-205ENST00000545868 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
GABRB3-205ENST00000545868 TSPOAP1O95153 1857 aa17.02■□□□□ 0.32
GABRB3-205ENST00000545868 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
GABRB3-205ENST00000545868 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
GABRB3-205ENST00000545868 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
GABRB3-205ENST00000545868 IQGAP2Q13576 1575 aa16.93■□□□□ 0.3
GABRB3-205ENST00000545868 CARMIL1Q5VZK9 1371 aa16.91■□□□□ 0.3
GABRB3-205ENST00000545868 PPRC1Q5VV67 1664 aaKnown RBP16.9■□□□□ 0.3
GABRB3-205ENST00000545868 FAM69CQ0P6D2 419 aa16.88■□□□□ 0.29
GABRB3-205ENST00000545868 KDM6BO15054 1643 aa16.86■□□□□ 0.29
GABRB3-205ENST00000545868 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
GABRB3-205ENST00000545868 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
GABRB3-205ENST00000545868 PTPRGP23470 1445 aa16.83■□□□□ 0.28
GABRB3-205ENST00000545868 ABCC2Q92887 1545 aa16.82■□□□□ 0.28
GABRB3-205ENST00000545868 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
GABRB3-205ENST00000545868 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
GABRB3-205ENST00000545868 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
GABRB3-205ENST00000545868 KIAA0556O60303 1618 aa16.8■□□□□ 0.28
GABRB3-205ENST00000545868 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
GABRB3-205ENST00000545868 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
GABRB3-205ENST00000545868 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
GABRB3-205ENST00000545868 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
GABRB3-205ENST00000545868 GLI2P10070 1586 aa16.78■□□□□ 0.28
GABRB3-205ENST00000545868 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
GABRB3-205ENST00000545868 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
GABRB3-205ENST00000545868 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
GABRB3-205ENST00000545868 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
GABRB3-205ENST00000545868 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
GABRB3-205ENST00000545868 KDM5BQ9UGL1 1544 aa16.73■□□□□ 0.27
GABRB3-205ENST00000545868 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
GABRB3-205ENST00000545868 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
GABRB3-205ENST00000545868 KDM4FA0A1W2PPD8 638 aa16.66■□□□□ 0.26
GABRB3-205ENST00000545868 COL17A1Q9UMD9 1497 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-205ENST00000545868 ABCA8O94911 1581 aa16.64■□□□□ 0.25
GABRB3-205ENST00000545868 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
GABRB3-205ENST00000545868 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
GABRB3-205ENST00000545868 WDR7Q9Y4E6 1490 aa16.6■□□□□ 0.25
GABRB3-205ENST00000545868 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
GABRB3-205ENST00000545868 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
GABRB3-205ENST00000545868 TEX14Q8IWB6 1497 aa16.55■□□□□ 0.24
GABRB3-205ENST00000545868 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
GABRB3-205ENST00000545868 SAMD9Q5K651 1589 aa16.52■□□□□ 0.24
GABRB3-205ENST00000545868 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-205ENST00000545868 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
GABRB3-205ENST00000545868 KIF21BO75037 1637 aa16.47■□□□□ 0.23
GABRB3-205ENST00000545868 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
GABRB3-205ENST00000545868 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
GABRB3-205ENST00000545868 ABCA9Q8IUA7 1624 aa16.45■□□□□ 0.22
GABRB3-205ENST00000545868 ATP10BO94823 1461 aa16.43■□□□□ 0.22
GABRB3-205ENST00000545868 KCNH8Q96L42 1107 aa16.41■□□□□ 0.22
GABRB3-205ENST00000545868 HECW2Q9P2P5 1572 aa16.39■□□□□ 0.21
GABRB3-205ENST00000545868 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
GABRB3-205ENST00000545868 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
GABRB3-205ENST00000545868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.21
GABRB3-205ENST00000545868 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
GABRB3-205ENST00000545868 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
GABRB3-205ENST00000545868 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
GABRB3-205ENST00000545868 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
GABRB3-205ENST00000545868 ADAMTSL3P82987 1691 aa16.32■□□□□ 0.2
GABRB3-205ENST00000545868 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
GABRB3-205ENST00000545868 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
GABRB3-205ENST00000545868 EEA1Q15075 1411 aa16.3■□□□□ 0.2
GABRB3-205ENST00000545868 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
GABRB3-205ENST00000545868 TTC37Q6PGP7 1564 aa16.27■□□□□ 0.2
GABRB3-205ENST00000545868 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.19
GABRB3-205ENST00000545868 NEO1Q92859 1461 aa16.27■□□□□ 0.19
GABRB3-205ENST00000545868 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
GABRB3-205ENST00000545868 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
GABRB3-205ENST00000545868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
GABRB3-205ENST00000545868 MADDQ8WXG6 1647 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms