RNA–Protein interactions for RNA: ENST00000545276.1

LINC02440-201, Transcript of long intergenic non-protein coding RNA 2440, humanhuman

TSL 2 BASIC

Gene LINC02440, Length 680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02440-201ENST00000545276 KIAA0586Q9BVV6 1533 aa24.21■■□□□ 1.47
LINC02440-201ENST00000545276 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
LINC02440-201ENST00000545276 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
LINC02440-201ENST00000545276 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
LINC02440-201ENST00000545276 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
LINC02440-201ENST00000545276 CTTNBP2Q8WZ74 1663 aa24.01■■□□□ 1.43
LINC02440-201ENST00000545276 PRXQ9BXM0 1461 aa24■■□□□ 1.43
LINC02440-201ENST00000545276 EEA1Q15075 1411 aa23.95■■□□□ 1.42
LINC02440-201ENST00000545276 CARMIL2Q6F5E8 1435 aa23.95■■□□□ 1.42
LINC02440-201ENST00000545276 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
LINC02440-201ENST00000545276 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
LINC02440-201ENST00000545276 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
LINC02440-201ENST00000545276 DISP1Q96F81 1524 aa23.9■■□□□ 1.42
LINC02440-201ENST00000545276 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
LINC02440-201ENST00000545276 KIAA0556O60303 1618 aa23.87■■□□□ 1.41
LINC02440-201ENST00000545276 PTPRGP23470 1445 aa23.85■■□□□ 1.41
LINC02440-201ENST00000545276 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
LINC02440-201ENST00000545276 MAPKBP1O60336 1514 aa23.81■■□□□ 1.4
LINC02440-201ENST00000545276 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
LINC02440-201ENST00000545276 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
LINC02440-201ENST00000545276 KIF13AQ9H1H9 1805 aa23.77■■□□□ 1.4
LINC02440-201ENST00000545276 KIF21BO75037 1637 aa23.75■■□□□ 1.39
LINC02440-201ENST00000545276 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
LINC02440-201ENST00000545276 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
LINC02440-201ENST00000545276 ABCC2Q92887 1545 aa23.73■■□□□ 1.39
LINC02440-201ENST00000545276 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
LINC02440-201ENST00000545276 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
LINC02440-201ENST00000545276 DIP2BQ9P265 1576 aa23.68■■□□□ 1.38
LINC02440-201ENST00000545276 ABCC10Q5T3U5 1492 aa23.68■■□□□ 1.38
LINC02440-201ENST00000545276 FAM9AQ8IZU1 332 aaPredicted RBP23.67■■□□□ 1.38
LINC02440-201ENST00000545276 SAMD9Q5K651 1589 aa23.66■■□□□ 1.38
LINC02440-201ENST00000545276 KDM5BQ9UGL1 1544 aa23.63■■□□□ 1.37
LINC02440-201ENST00000545276 ZCCHC11Q5TAX3 1644 aaKnown RBP23.61■■□□□ 1.37
LINC02440-201ENST00000545276 ABCA8O94911 1581 aa23.61■■□□□ 1.37
LINC02440-201ENST00000545276 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
LINC02440-201ENST00000545276 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
LINC02440-201ENST00000545276 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
LINC02440-201ENST00000545276 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
LINC02440-201ENST00000545276 GLI2P10070 1586 aa23.51■■□□□ 1.35
LINC02440-201ENST00000545276 TSPOAP1O95153 1857 aa23.46■■□□□ 1.35
LINC02440-201ENST00000545276 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
LINC02440-201ENST00000545276 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
LINC02440-201ENST00000545276 EPRSP07814 1512 aaKnown RBP23.44■■□□□ 1.34
LINC02440-201ENST00000545276 WDR7Q9Y4E6 1490 aa23.44■■□□□ 1.34
LINC02440-201ENST00000545276 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
LINC02440-201ENST00000545276 MAP3K4Q9Y6R4 1608 aa23.41■■□□□ 1.34
LINC02440-201ENST00000545276 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
LINC02440-201ENST00000545276 PPRC1Q5VV67 1664 aaKnown RBP23.4■■□□□ 1.34
LINC02440-201ENST00000545276 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
LINC02440-201ENST00000545276 KDM6BO15054 1643 aa23.35■■□□□ 1.33
LINC02440-201ENST00000545276 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
LINC02440-201ENST00000545276 ATP10BO94823 1461 aa23.35■■□□□ 1.33
LINC02440-201ENST00000545276 NUP153P49790 1475 aaKnown RBP23.33■■□□□ 1.33
LINC02440-201ENST00000545276 CFAP43Q8NDM7 1665 aa23.32■■□□□ 1.32
LINC02440-201ENST00000545276 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
LINC02440-201ENST00000545276 TEX14Q8IWB6 1497 aa23.29■■□□□ 1.32
LINC02440-201ENST00000545276 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
LINC02440-201ENST00000545276 ARID3CA6NKF2 412 aa23.25■■□□□ 1.31
LINC02440-201ENST00000545276 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
LINC02440-201ENST00000545276 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
LINC02440-201ENST00000545276 ABCA9Q8IUA7 1624 aa23.22■■□□□ 1.31
LINC02440-201ENST00000545276 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
LINC02440-201ENST00000545276 KCNH8Q96L42 1107 aa23.2■■□□□ 1.3
LINC02440-201ENST00000545276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
LINC02440-201ENST00000545276 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
LINC02440-201ENST00000545276 CDK13Q14004 1512 aaKnown RBP23.14■■□□□ 1.3
LINC02440-201ENST00000545276 COL17A1Q9UMD9 1497 aaPredicted RBP23.11■■□□□ 1.29
LINC02440-201ENST00000545276 LRRIQ1Q96JM4 1722 aa23.09■■□□□ 1.29
LINC02440-201ENST00000545276 PCF11O94913 1555 aaKnown RBP23.09■■□□□ 1.29
LINC02440-201ENST00000545276 CLIP1P30622 1438 aa23.08■■□□□ 1.29
LINC02440-201ENST00000545276 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
LINC02440-201ENST00000545276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.04■■□□□ 1.28
LINC02440-201ENST00000545276 CASKIN1Q8WXD9 1431 aa23.04■■□□□ 1.28
LINC02440-201ENST00000545276 TTC37Q6PGP7 1564 aa23.03■■□□□ 1.28
LINC02440-201ENST00000545276 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
LINC02440-201ENST00000545276 NEO1Q92859 1461 aa23.02■■□□□ 1.28
LINC02440-201ENST00000545276 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
LINC02440-201ENST00000545276 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
LINC02440-201ENST00000545276 FYCO1Q9BQS8 1478 aa23.01■■□□□ 1.27
LINC02440-201ENST00000545276 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
LINC02440-201ENST00000545276 CFAP74Q9C0B2 1584 aa23■■□□□ 1.27
LINC02440-201ENST00000545276 KIF14Q15058 1648 aa22.97■■□□□ 1.27
LINC02440-201ENST00000545276 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
LINC02440-201ENST00000545276 TROQ12816 1431 aaPredicted RBP22.95■■□□□ 1.26
LINC02440-201ENST00000545276 CEP162Q5TB80 1403 aa22.95■■□□□ 1.26
LINC02440-201ENST00000545276 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
LINC02440-201ENST00000545276 FANCAO15360 1455 aa22.92■■□□□ 1.26
LINC02440-201ENST00000545276 FRMPD1Q5SYB0 1578 aa22.89■■□□□ 1.26
LINC02440-201ENST00000545276 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
LINC02440-201ENST00000545276 PLCH2O75038 1416 aa22.87■■□□□ 1.25
LINC02440-201ENST00000545276 RICTORQ6R327 1708 aa22.87■■□□□ 1.25
LINC02440-201ENST00000545276 AKNAQ7Z591 1439 aa22.86■■□□□ 1.25
LINC02440-201ENST00000545276 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
LINC02440-201ENST00000545276 PREX2Q70Z35 1606 aa22.81■■□□□ 1.24
LINC02440-201ENST00000545276 ADGRL1O94910 1474 aa22.8■■□□□ 1.24
LINC02440-201ENST00000545276 RAPGEF3O95398 923 aa22.79■■□□□ 1.24
LINC02440-201ENST00000545276 CDC42BPBQ9Y5S2 1711 aa22.79■■□□□ 1.24
LINC02440-201ENST00000545276 ARHGAP5Q13017 1502 aa22.78■■□□□ 1.24
LINC02440-201ENST00000545276 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
LINC02440-201ENST00000545276 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms