RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
PRKAB1-208ENST00000545223 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
PRKAB1-208ENST00000545223 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
PRKAB1-208ENST00000545223 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
PRKAB1-208ENST00000545223 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
PRKAB1-208ENST00000545223 KIF21BO75037 1637 aa11.88□□□□□ -0.51
PRKAB1-208ENST00000545223 NUP160Q12769 1436 aa11.86□□□□□ -0.51
PRKAB1-208ENST00000545223 UBTFP17480 764 aaKnown RBP11.85□□□□□ -0.51
PRKAB1-208ENST00000545223 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
PRKAB1-208ENST00000545223 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
PRKAB1-208ENST00000545223 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
PRKAB1-208ENST00000545223 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
PRKAB1-208ENST00000545223 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
PRKAB1-208ENST00000545223 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
PRKAB1-208ENST00000545223 IQGAP2Q13576 1575 aa11.76□□□□□ -0.53
PRKAB1-208ENST00000545223 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
PRKAB1-208ENST00000545223 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
PRKAB1-208ENST00000545223 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
PRKAB1-208ENST00000545223 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
PRKAB1-208ENST00000545223 FOXD1Q16676 465 aa11.73□□□□□ -0.53
PRKAB1-208ENST00000545223 PRG4Q92954 1404 aaPredicted RBP11.73□□□□□ -0.53
PRKAB1-208ENST00000545223 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
PRKAB1-208ENST00000545223 TTBK1Q5TCY1 1321 aaPredicted RBP11.71□□□□□ -0.53
PRKAB1-208ENST00000545223 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
PRKAB1-208ENST00000545223 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
PRKAB1-208ENST00000545223 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
PRKAB1-208ENST00000545223 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
PRKAB1-208ENST00000545223 ARHGAP35Q9NRY4 1499 aa11.68□□□□□ -0.54
PRKAB1-208ENST00000545223 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
PRKAB1-208ENST00000545223 KIAA0556O60303 1618 aa11.66□□□□□ -0.54
PRKAB1-208ENST00000545223 CLIP1P30622 1438 aa11.66□□□□□ -0.54
PRKAB1-208ENST00000545223 FHOD3Q2V2M9 1422 aa11.66□□□□□ -0.54
PRKAB1-208ENST00000545223 SAMD9Q5K651 1589 aa11.66□□□□□ -0.54
PRKAB1-208ENST00000545223 CARMIL2Q6F5E8 1435 aa11.64□□□□□ -0.55
PRKAB1-208ENST00000545223 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
PRKAB1-208ENST00000545223 PTPRGP23470 1445 aa11.61□□□□□ -0.55
PRKAB1-208ENST00000545223 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
PRKAB1-208ENST00000545223 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
PRKAB1-208ENST00000545223 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
PRKAB1-208ENST00000545223 ATP1B4Q9UN42 357 aaPredicted RBP11.55□□□□□ -0.56
PRKAB1-208ENST00000545223 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
PRKAB1-208ENST00000545223 ABCA8O94911 1581 aa11.53□□□□□ -0.56
PRKAB1-208ENST00000545223 FMN1Q68DA7 1419 aa11.52□□□□□ -0.57
PRKAB1-208ENST00000545223 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
PRKAB1-208ENST00000545223 ADCY10Q96PN6 1610 aa11.5□□□□□ -0.57
PRKAB1-208ENST00000545223 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
PRKAB1-208ENST00000545223 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
PRKAB1-208ENST00000545223 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
PRKAB1-208ENST00000545223 NUP153P49790 1475 aaKnown RBP11.49□□□□□ -0.57
PRKAB1-208ENST00000545223 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
PRKAB1-208ENST00000545223 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
PRKAB1-208ENST00000545223 LRRIQ1Q96JM4 1722 aa11.47□□□□□ -0.57
PRKAB1-208ENST00000545223 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
PRKAB1-208ENST00000545223 ATP10BO94823 1461 aa11.47□□□□□ -0.57
PRKAB1-208ENST00000545223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
PRKAB1-208ENST00000545223 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
PRKAB1-208ENST00000545223 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
PRKAB1-208ENST00000545223 EPRSP07814 1512 aaKnown RBP11.44□□□□□ -0.58
PRKAB1-208ENST00000545223 KDM5BQ9UGL1 1544 aa11.44□□□□□ -0.58
PRKAB1-208ENST00000545223 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
PRKAB1-208ENST00000545223 HECW1Q76N89 1606 aa11.43□□□□□ -0.58
PRKAB1-208ENST00000545223 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRKAB1-208ENST00000545223 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
PRKAB1-208ENST00000545223 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
PRKAB1-208ENST00000545223 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
PRKAB1-208ENST00000545223 MAGI3Q5TCQ9 1506 aa11.39□□□□□ -0.59
PRKAB1-208ENST00000545223 ASXL2Q76L83 1435 aa11.38□□□□□ -0.59
PRKAB1-208ENST00000545223 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
PRKAB1-208ENST00000545223 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
PRKAB1-208ENST00000545223 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
PRKAB1-208ENST00000545223 TIAM1Q13009 1591 aa11.37□□□□□ -0.59
PRKAB1-208ENST00000545223 APLP2Q06481 763 aa11.36□□□□□ -0.59
PRKAB1-208ENST00000545223 CCDC18Q5T9S5 1454 aa11.36□□□□□ -0.59
PRKAB1-208ENST00000545223 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
PRKAB1-208ENST00000545223 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
PRKAB1-208ENST00000545223 WDR7Q9Y4E6 1490 aa11.33□□□□□ -0.6
PRKAB1-208ENST00000545223 CDK11AQ9UQ88 783 aaPredicted RBP11.33□□□□□ -0.6
PRKAB1-208ENST00000545223 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
PRKAB1-208ENST00000545223 MAP3K1Q13233 1512 aa11.32□□□□□ -0.6
PRKAB1-208ENST00000545223 TROQ12816 1431 aaPredicted RBP11.32□□□□□ -0.6
PRKAB1-208ENST00000545223 KIF14Q15058 1648 aa11.31□□□□□ -0.6
PRKAB1-208ENST00000545223 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
PRKAB1-208ENST00000545223 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
PRKAB1-208ENST00000545223 ABCC10Q5T3U5 1492 aa11.3□□□□□ -0.6
PRKAB1-208ENST00000545223 EHBP1L1Q8N3D4 1523 aa11.28□□□□□ -0.6
PRKAB1-208ENST00000545223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRKAB1-208ENST00000545223 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
PRKAB1-208ENST00000545223 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
PRKAB1-208ENST00000545223 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
PRKAB1-208ENST00000545223 TTC37Q6PGP7 1564 aa11.25□□□□□ -0.61
PRKAB1-208ENST00000545223 PHLDB1Q86UU1 1377 aa11.24□□□□□ -0.61
PRKAB1-208ENST00000545223 GLI2P10070 1586 aa11.24□□□□□ -0.61
PRKAB1-208ENST00000545223 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
PRKAB1-208ENST00000545223 CD109Q6YHK3 1445 aa11.23□□□□□ -0.61
PRKAB1-208ENST00000545223 GPATCH8Q9UKJ3 1502 aaKnown RBP11.23□□□□□ -0.61
PRKAB1-208ENST00000545223 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
PRKAB1-208ENST00000545223 MAP3K4Q9Y6R4 1608 aa11.21□□□□□ -0.61
PRKAB1-208ENST00000545223 CCNB3Q8WWL7 1395 aa11.21□□□□□ -0.61
PRKAB1-208ENST00000545223 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
PRKAB1-208ENST00000545223 PLCH2O75038 1416 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1472.7 ms