RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
TNC-213ENST00000544972 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
TNC-213ENST00000544972 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
TNC-213ENST00000544972 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.44
TNC-213ENST00000544972 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
TNC-213ENST00000544972 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
TNC-213ENST00000544972 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
TNC-213ENST00000544972 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
TNC-213ENST00000544972 KIAA0586Q9BVV6 1533 aa17.79■□□□□ 0.44
TNC-213ENST00000544972 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
TNC-213ENST00000544972 FBLN2P98095 1184 aa17.77■□□□□ 0.43
TNC-213ENST00000544972 P3H3Q8IVL6 736 aa17.77■□□□□ 0.43
TNC-213ENST00000544972 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
TNC-213ENST00000544972 NUP160Q12769 1436 aa17.76■□□□□ 0.43
TNC-213ENST00000544972 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
TNC-213ENST00000544972 UGGT2Q9NYU1 1516 aa17.73■□□□□ 0.43
TNC-213ENST00000544972 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
TNC-213ENST00000544972 CHD1O14646 1710 aa17.71■□□□□ 0.43
TNC-213ENST00000544972 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
TNC-213ENST00000544972 APLP2Q06481 763 aa17.67■□□□□ 0.42
TNC-213ENST00000544972 DISP1Q96F81 1524 aa17.66■□□□□ 0.42
TNC-213ENST00000544972 FMN1Q68DA7 1419 aa17.66■□□□□ 0.42
TNC-213ENST00000544972 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
TNC-213ENST00000544972 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
TNC-213ENST00000544972 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
TNC-213ENST00000544972 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
TNC-213ENST00000544972 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
TNC-213ENST00000544972 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
TNC-213ENST00000544972 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
TNC-213ENST00000544972 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
TNC-213ENST00000544972 CFAP43Q8NDM7 1665 aa17.57■□□□□ 0.4
TNC-213ENST00000544972 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
TNC-213ENST00000544972 ATP1B4Q9UN42 357 aaPredicted RBP17.54■□□□□ 0.4
TNC-213ENST00000544972 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
TNC-213ENST00000544972 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
TNC-213ENST00000544972 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.4
TNC-213ENST00000544972 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
TNC-213ENST00000544972 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
TNC-213ENST00000544972 HECW1Q76N89 1606 aa17.49■□□□□ 0.39
TNC-213ENST00000544972 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
TNC-213ENST00000544972 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
TNC-213ENST00000544972 EPRSP07814 1512 aaKnown RBP17.44■□□□□ 0.38
TNC-213ENST00000544972 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
TNC-213ENST00000544972 PLB1Q6P1J6 1458 aa17.43■□□□□ 0.38
TNC-213ENST00000544972 ERCC6L2Q5T890 1561 aa17.42■□□□□ 0.38
TNC-213ENST00000544972 CDK13Q14004 1512 aaKnown RBP17.41■□□□□ 0.38
TNC-213ENST00000544972 ABCA8O94911 1581 aa17.4■□□□□ 0.38
TNC-213ENST00000544972 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.38
TNC-213ENST00000544972 RRBP1Q9P2E9 1410 aaKnown RBP17.38■□□□□ 0.37
TNC-213ENST00000544972 PTPRGP23470 1445 aa17.38■□□□□ 0.37
TNC-213ENST00000544972 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
TNC-213ENST00000544972 PHLDB1Q86UU1 1377 aa17.37■□□□□ 0.37
TNC-213ENST00000544972 EHBP1L1Q8N3D4 1523 aa17.36■□□□□ 0.37
TNC-213ENST00000544972 ARID3CA6NKF2 412 aa17.35■□□□□ 0.37
TNC-213ENST00000544972 OSCARQ8IYS5 282 aa17.33■□□□□ 0.37
TNC-213ENST00000544972 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
TNC-213ENST00000544972 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
TNC-213ENST00000544972 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
TNC-213ENST00000544972 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
TNC-213ENST00000544972 UACAQ9BZF9 1416 aa17.28■□□□□ 0.36
TNC-213ENST00000544972 ATP10BO94823 1461 aa17.28■□□□□ 0.36
TNC-213ENST00000544972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
TNC-213ENST00000544972 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
TNC-213ENST00000544972 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
TNC-213ENST00000544972 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
TNC-213ENST00000544972 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
TNC-213ENST00000544972 FGD6Q6ZV73 1430 aa17.23■□□□□ 0.35
TNC-213ENST00000544972 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
TNC-213ENST00000544972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
TNC-213ENST00000544972 UHRF1BP1LA0JNW5 1464 aa17.2■□□□□ 0.34
TNC-213ENST00000544972 ADCY10Q96PN6 1610 aa17.2■□□□□ 0.34
TNC-213ENST00000544972 HRCP23327 699 aa17.18■□□□□ 0.34
TNC-213ENST00000544972 KIF14Q15058 1648 aa17.17■□□□□ 0.34
TNC-213ENST00000544972 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
TNC-213ENST00000544972 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
TNC-213ENST00000544972 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
TNC-213ENST00000544972 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
TNC-213ENST00000544972 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
TNC-213ENST00000544972 ITGAEP38570 1179 aa17.13■□□□□ 0.33
TNC-213ENST00000544972 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
TNC-213ENST00000544972 ZCCHC11Q5TAX3 1644 aaKnown RBP17.12■□□□□ 0.33
TNC-213ENST00000544972 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
TNC-213ENST00000544972 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
TNC-213ENST00000544972 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.32
TNC-213ENST00000544972 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
TNC-213ENST00000544972 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
TNC-213ENST00000544972 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
TNC-213ENST00000544972 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.32
TNC-213ENST00000544972 CFDP1Q9UEE9 299 aaPredicted RBP17.02■□□□□ 0.31
TNC-213ENST00000544972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.31
TNC-213ENST00000544972 TTC37Q6PGP7 1564 aa17.01■□□□□ 0.31
TNC-213ENST00000544972 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
TNC-213ENST00000544972 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
TNC-213ENST00000544972 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
TNC-213ENST00000544972 CDC42BPBQ9Y5S2 1711 aa16.98■□□□□ 0.31
TNC-213ENST00000544972 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
TNC-213ENST00000544972 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
TNC-213ENST00000544972 PREX2Q70Z35 1606 aa16.98■□□□□ 0.31
TNC-213ENST00000544972 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
TNC-213ENST00000544972 DNMT1P26358 1616 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms