RNA–Protein interactions for RNA: ENST00000544862.5

TNFSF11-205, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-205ENST00000544862 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
TNFSF11-205ENST00000544862 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
TNFSF11-205ENST00000544862 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
TNFSF11-205ENST00000544862 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
TNFSF11-205ENST00000544862 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNFSF11-205ENST00000544862 WDR62O43379 1518 aa13.44□□□□□ -0.26
TNFSF11-205ENST00000544862 SOCS7O14512 581 aa13.43□□□□□ -0.26
TNFSF11-205ENST00000544862 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
TNFSF11-205ENST00000544862 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
TNFSF11-205ENST00000544862 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
TNFSF11-205ENST00000544862 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
TNFSF11-205ENST00000544862 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
TNFSF11-205ENST00000544862 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
TNFSF11-205ENST00000544862 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
TNFSF11-205ENST00000544862 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
TNFSF11-205ENST00000544862 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
TNFSF11-205ENST00000544862 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
TNFSF11-205ENST00000544862 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
TNFSF11-205ENST00000544862 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
TNFSF11-205ENST00000544862 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
TNFSF11-205ENST00000544862 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
TNFSF11-205ENST00000544862 HECW2Q9P2P5 1572 aa13.19□□□□□ -0.3
TNFSF11-205ENST00000544862 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
TNFSF11-205ENST00000544862 MIER1Q8N108 512 aa13.14□□□□□ -0.31
TNFSF11-205ENST00000544862 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
TNFSF11-205ENST00000544862 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TNFSF11-205ENST00000544862 CHD1O14646 1710 aa13.11□□□□□ -0.31
TNFSF11-205ENST00000544862 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
TNFSF11-205ENST00000544862 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
TNFSF11-205ENST00000544862 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
TNFSF11-205ENST00000544862 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
TNFSF11-205ENST00000544862 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
TNFSF11-205ENST00000544862 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFSF11-205ENST00000544862 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
TNFSF11-205ENST00000544862 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
TNFSF11-205ENST00000544862 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
TNFSF11-205ENST00000544862 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
TNFSF11-205ENST00000544862 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
TNFSF11-205ENST00000544862 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
TNFSF11-205ENST00000544862 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
TNFSF11-205ENST00000544862 HAX1O00165 279 aa12.99□□□□□ -0.33
TNFSF11-205ENST00000544862 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
TNFSF11-205ENST00000544862 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
TNFSF11-205ENST00000544862 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
TNFSF11-205ENST00000544862 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
TNFSF11-205ENST00000544862 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
TNFSF11-205ENST00000544862 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
TNFSF11-205ENST00000544862 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
TNFSF11-205ENST00000544862 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
TNFSF11-205ENST00000544862 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
TNFSF11-205ENST00000544862 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
TNFSF11-205ENST00000544862 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
TNFSF11-205ENST00000544862 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
TNFSF11-205ENST00000544862 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
TNFSF11-205ENST00000544862 CLCN6P51797 869 aa12.82□□□□□ -0.36
TNFSF11-205ENST00000544862 NUBP1P53384 320 aa12.82□□□□□ -0.36
TNFSF11-205ENST00000544862 KDM6BO15054 1643 aa12.81□□□□□ -0.36
TNFSF11-205ENST00000544862 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
TNFSF11-205ENST00000544862 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
TNFSF11-205ENST00000544862 EVX2Q03828 476 aa12.8□□□□□ -0.36
TNFSF11-205ENST00000544862 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
TNFSF11-205ENST00000544862 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
TNFSF11-205ENST00000544862 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
TNFSF11-205ENST00000544862 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
TNFSF11-205ENST00000544862 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
TNFSF11-205ENST00000544862 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
TNFSF11-205ENST00000544862 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
TNFSF11-205ENST00000544862 GSE1Q14687 1217 aa12.71□□□□□ -0.37
TNFSF11-205ENST00000544862 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
TNFSF11-205ENST00000544862 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
TNFSF11-205ENST00000544862 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
TNFSF11-205ENST00000544862 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
TNFSF11-205ENST00000544862 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
TNFSF11-205ENST00000544862 GABBR2O75899 941 aa12.62□□□□□ -0.39
TNFSF11-205ENST00000544862 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
TNFSF11-205ENST00000544862 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
TNFSF11-205ENST00000544862 FAM69CQ0P6D2 419 aa12.59□□□□□ -0.39
TNFSF11-205ENST00000544862 CFTRP13569 1480 aa12.59□□□□□ -0.39
TNFSF11-205ENST00000544862 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
TNFSF11-205ENST00000544862 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
TNFSF11-205ENST00000544862 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
TNFSF11-205ENST00000544862 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
TNFSF11-205ENST00000544862 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
TNFSF11-205ENST00000544862 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
TNFSF11-205ENST00000544862 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
TNFSF11-205ENST00000544862 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
TNFSF11-205ENST00000544862 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
TNFSF11-205ENST00000544862 MAP3K13O43283 966 aa12.5□□□□□ -0.41
TNFSF11-205ENST00000544862 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
TNFSF11-205ENST00000544862 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
TNFSF11-205ENST00000544862 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
TNFSF11-205ENST00000544862 PYGBP11216 843 aa12.49□□□□□ -0.41
TNFSF11-205ENST00000544862 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
TNFSF11-205ENST00000544862 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
TNFSF11-205ENST00000544862 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
TNFSF11-205ENST00000544862 PRDM2Q13029 1718 aa12.46□□□□□ -0.41
TNFSF11-205ENST00000544862 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
TNFSF11-205ENST00000544862 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
TNFSF11-205ENST00000544862 TOP2BQ02880 1626 aa12.44□□□□□ -0.42
TNFSF11-205ENST00000544862 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms