RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
CIT-214ENST00000544588 KIAA0586Q9BVV6 1533 aa22.27■■□□□ 1.16
CIT-214ENST00000544588 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
CIT-214ENST00000544588 CUL7Q14999 1698 aa22.23■■□□□ 1.15
CIT-214ENST00000544588 SHROOM2Q13796 1616 aa22.23■■□□□ 1.15
CIT-214ENST00000544588 NPM1P06748 294 aaKnown RBP eCLIP22.21■■□□□ 1.15
CIT-214ENST00000544588 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
CIT-214ENST00000544588 PTPRGP23470 1445 aa22.12■■□□□ 1.13
CIT-214ENST00000544588 CARMIL2Q6F5E8 1435 aa22.12■■□□□ 1.13
CIT-214ENST00000544588 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
CIT-214ENST00000544588 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
CIT-214ENST00000544588 FAM9AQ8IZU1 332 aaPredicted RBP22.06■■□□□ 1.12
CIT-214ENST00000544588 FAM69CQ0P6D2 419 aa22.02■■□□□ 1.12
CIT-214ENST00000544588 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
CIT-214ENST00000544588 IQGAP2Q13576 1575 aa22.02■■□□□ 1.12
CIT-214ENST00000544588 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
CIT-214ENST00000544588 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
CIT-214ENST00000544588 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
CIT-214ENST00000544588 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
CIT-214ENST00000544588 UACAQ9BZF9 1416 aa21.9■■□□□ 1.1
CIT-214ENST00000544588 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
CIT-214ENST00000544588 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
CIT-214ENST00000544588 ADCY10Q96PN6 1610 aa21.9■■□□□ 1.1
CIT-214ENST00000544588 EEA1Q15075 1411 aa21.88■■□□□ 1.09
CIT-214ENST00000544588 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
CIT-214ENST00000544588 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
CIT-214ENST00000544588 ABCC2Q92887 1545 aa21.84■■□□□ 1.09
CIT-214ENST00000544588 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
CIT-214ENST00000544588 MAPKBP1O60336 1514 aa21.83■■□□□ 1.09
CIT-214ENST00000544588 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
CIT-214ENST00000544588 UHRF1BP1LA0JNW5 1464 aa21.8■■□□□ 1.08
CIT-214ENST00000544588 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
CIT-214ENST00000544588 ARID3CA6NKF2 412 aa21.77■■□□□ 1.08
CIT-214ENST00000544588 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
CIT-214ENST00000544588 PLB1Q6P1J6 1458 aa21.75■■□□□ 1.07
CIT-214ENST00000544588 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
CIT-214ENST00000544588 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.07
CIT-214ENST00000544588 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
CIT-214ENST00000544588 CTTNBP2Q8WZ74 1663 aa21.7■■□□□ 1.06
CIT-214ENST00000544588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
CIT-214ENST00000544588 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
CIT-214ENST00000544588 KIF13AQ9H1H9 1805 aa21.65■■□□□ 1.06
CIT-214ENST00000544588 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
CIT-214ENST00000544588 ABCA8O94911 1581 aa21.6■■□□□ 1.05
CIT-214ENST00000544588 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
CIT-214ENST00000544588 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
CIT-214ENST00000544588 ZCCHC11Q5TAX3 1644 aaKnown RBP21.57■■□□□ 1.04
CIT-214ENST00000544588 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
CIT-214ENST00000544588 KIF21BO75037 1637 aa21.55■■□□□ 1.04
CIT-214ENST00000544588 GLI2P10070 1586 aa21.54■■□□□ 1.04
CIT-214ENST00000544588 ATP10BO94823 1461 aa21.54■■□□□ 1.04
CIT-214ENST00000544588 SAMD9Q5K651 1589 aa21.51■■□□□ 1.03
CIT-214ENST00000544588 TSPOAP1O95153 1857 aa21.51■■□□□ 1.03
CIT-214ENST00000544588 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
CIT-214ENST00000544588 KDM6BO15054 1643 aa21.48■■□□□ 1.03
CIT-214ENST00000544588 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
CIT-214ENST00000544588 TEX14Q8IWB6 1497 aa21.46■■□□□ 1.03
CIT-214ENST00000544588 EFCAB5A4FU69 1503 aa21.42■■□□□ 1.02
CIT-214ENST00000544588 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
CIT-214ENST00000544588 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
CIT-214ENST00000544588 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.02
CIT-214ENST00000544588 MAP3K4Q9Y6R4 1608 aa21.37■■□□□ 1.01
CIT-214ENST00000544588 MAGI3Q5TCQ9 1506 aa21.36■■□□□ 1.01
CIT-214ENST00000544588 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
CIT-214ENST00000544588 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
CIT-214ENST00000544588 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
CIT-214ENST00000544588 KDM4FA0A1W2PPD8 638 aa21.31■■□□□ 1
CIT-214ENST00000544588 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
CIT-214ENST00000544588 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
CIT-214ENST00000544588 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
CIT-214ENST00000544588 CDK13Q14004 1512 aaKnown RBP21.25■□□□□ 0.99
CIT-214ENST00000544588 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
CIT-214ENST00000544588 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
CIT-214ENST00000544588 CLIP1P30622 1438 aa21.21■□□□□ 0.99
CIT-214ENST00000544588 ABCA9Q8IUA7 1624 aa21.19■□□□□ 0.98
CIT-214ENST00000544588 NEO1Q92859 1461 aa21.17■□□□□ 0.98
CIT-214ENST00000544588 ARAP3Q8WWN8 1544 aa21.17■□□□□ 0.98
CIT-214ENST00000544588 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
CIT-214ENST00000544588 AKNAQ7Z591 1439 aa21.13■□□□□ 0.97
CIT-214ENST00000544588 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
CIT-214ENST00000544588 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
CIT-214ENST00000544588 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
CIT-214ENST00000544588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
CIT-214ENST00000544588 FANCAO15360 1455 aa21.13■□□□□ 0.97
CIT-214ENST00000544588 ADGRL1O94910 1474 aa21.12■□□□□ 0.97
CIT-214ENST00000544588 ARID4BQ4LE39 1312 aaPredicted RBP21.11■□□□□ 0.97
CIT-214ENST00000544588 TROQ12816 1431 aaPredicted RBP21.11■□□□□ 0.97
CIT-214ENST00000544588 PLCH2O75038 1416 aa21.1■□□□□ 0.97
CIT-214ENST00000544588 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
CIT-214ENST00000544588 MYT1LQ9UL68 1186 aa21.05■□□□□ 0.96
CIT-214ENST00000544588 TTC37Q6PGP7 1564 aa21.05■□□□□ 0.96
CIT-214ENST00000544588 SCAPERQ9BY12 1400 aa21.04■□□□□ 0.96
CIT-214ENST00000544588 CCDC18Q5T9S5 1454 aa21.04■□□□□ 0.96
CIT-214ENST00000544588 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
CIT-214ENST00000544588 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.95
CIT-214ENST00000544588 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
CIT-214ENST00000544588 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
CIT-214ENST00000544588 KIF14Q15058 1648 aa20.97■□□□□ 0.95
CIT-214ENST00000544588 AFAP1Q8N556 730 aa20.97■□□□□ 0.95
CIT-214ENST00000544588 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms