RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
PDZD4-209ENST00000544474 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
PDZD4-209ENST00000544474 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
PDZD4-209ENST00000544474 ANP32CO43423 234 aa17.92■□□□□ 0.46
PDZD4-209ENST00000544474 POLR3GLQ9BT43 218 aa17.92■□□□□ 0.46
PDZD4-209ENST00000544474 UBE2Q2Q8WVN8 375 aa17.91■□□□□ 0.46
PDZD4-209ENST00000544474 ERICH6BQ5W0A0 696 aa17.88■□□□□ 0.45
PDZD4-209ENST00000544474 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
PDZD4-209ENST00000544474 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
PDZD4-209ENST00000544474 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
PDZD4-209ENST00000544474 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
PDZD4-209ENST00000544474 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
PDZD4-209ENST00000544474 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
PDZD4-209ENST00000544474 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
PDZD4-209ENST00000544474 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
PDZD4-209ENST00000544474 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
PDZD4-209ENST00000544474 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
PDZD4-209ENST00000544474 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
PDZD4-209ENST00000544474 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
PDZD4-209ENST00000544474 RRBP1Q9P2E9 1410 aaKnown RBP17.68■□□□□ 0.42
PDZD4-209ENST00000544474 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
PDZD4-209ENST00000544474 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
PDZD4-209ENST00000544474 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
PDZD4-209ENST00000544474 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
PDZD4-209ENST00000544474 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
PDZD4-209ENST00000544474 PRXQ9BXM0 1461 aa17.64■□□□□ 0.42
PDZD4-209ENST00000544474 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
PDZD4-209ENST00000544474 IL27Q8NEV9 243 aa17.62■□□□□ 0.41
PDZD4-209ENST00000544474 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
PDZD4-209ENST00000544474 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
PDZD4-209ENST00000544474 SETD5Q9C0A6 1442 aa17.59■□□□□ 0.41
PDZD4-209ENST00000544474 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
PDZD4-209ENST00000544474 PKNOX2Q96KN3 472 aa17.53■□□□□ 0.4
PDZD4-209ENST00000544474 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
PDZD4-209ENST00000544474 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
PDZD4-209ENST00000544474 CUX2O14529 1486 aa17.52■□□□□ 0.39
PDZD4-209ENST00000544474 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.39
PDZD4-209ENST00000544474 CHIC2Q9UKJ5 165 aa17.52■□□□□ 0.39
PDZD4-209ENST00000544474 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
PDZD4-209ENST00000544474 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
PDZD4-209ENST00000544474 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
PDZD4-209ENST00000544474 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
PDZD4-209ENST00000544474 ARXQ96QS3 562 aa17.49■□□□□ 0.39
PDZD4-209ENST00000544474 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
PDZD4-209ENST00000544474 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
PDZD4-209ENST00000544474 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
PDZD4-209ENST00000544474 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
PDZD4-209ENST00000544474 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
PDZD4-209ENST00000544474 BIVM-ERCC5R4GMW8 1640 aa17.44■□□□□ 0.38
PDZD4-209ENST00000544474 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
PDZD4-209ENST00000544474 PPP4R2Q9NY27 417 aa17.43■□□□□ 0.38
PDZD4-209ENST00000544474 CUX1P39880 1505 aa17.43■□□□□ 0.38
PDZD4-209ENST00000544474 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
PDZD4-209ENST00000544474 NEFMP07197 916 aa17.4■□□□□ 0.38
PDZD4-209ENST00000544474 FBLN2P98095 1184 aa17.39■□□□□ 0.37
PDZD4-209ENST00000544474 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
PDZD4-209ENST00000544474 IGF1RP08069 1367 aa17.38■□□□□ 0.37
PDZD4-209ENST00000544474 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
PDZD4-209ENST00000544474 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
PDZD4-209ENST00000544474 RRP7BPQ9NSQ0 103 aa17.35■□□□□ 0.37
PDZD4-209ENST00000544474 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
PDZD4-209ENST00000544474 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
PDZD4-209ENST00000544474 SLC4A3P48751 1232 aa17.34■□□□□ 0.37
PDZD4-209ENST00000544474 FOXD1Q16676 465 aa17.34■□□□□ 0.37
PDZD4-209ENST00000544474 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
PDZD4-209ENST00000544474 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
PDZD4-209ENST00000544474 DAXXQ9UER7 740 aaPredicted RBP17.31■□□□□ 0.36
PDZD4-209ENST00000544474 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
PDZD4-209ENST00000544474 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
PDZD4-209ENST00000544474 NESP48681 1621 aa17.29■□□□□ 0.36
PDZD4-209ENST00000544474 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
PDZD4-209ENST00000544474 BRPF3Q9ULD4 1205 aa17.27■□□□□ 0.35
PDZD4-209ENST00000544474 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
PDZD4-209ENST00000544474 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
PDZD4-209ENST00000544474 CFTRP13569 1480 aa17.25■□□□□ 0.35
PDZD4-209ENST00000544474 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
PDZD4-209ENST00000544474 GLIPR1L2Q4G1C9 344 aa17.25■□□□□ 0.35
PDZD4-209ENST00000544474 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
PDZD4-209ENST00000544474 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
PDZD4-209ENST00000544474 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
PDZD4-209ENST00000544474 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.34
PDZD4-209ENST00000544474 CCDC18Q5T9S5 1454 aa17.19■□□□□ 0.34
PDZD4-209ENST00000544474 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
PDZD4-209ENST00000544474 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
PDZD4-209ENST00000544474 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
PDZD4-209ENST00000544474 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
PDZD4-209ENST00000544474 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
PDZD4-209ENST00000544474 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
PDZD4-209ENST00000544474 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
PDZD4-209ENST00000544474 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
PDZD4-209ENST00000544474 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
PDZD4-209ENST00000544474 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
PDZD4-209ENST00000544474 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
PDZD4-209ENST00000544474 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDZD4-209ENST00000544474 TMC1Q8TDI8 760 aa17.11■□□□□ 0.33
PDZD4-209ENST00000544474 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
PDZD4-209ENST00000544474 PLIN1O60240 522 aa17.1■□□□□ 0.33
PDZD4-209ENST00000544474 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
PDZD4-209ENST00000544474 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
PDZD4-209ENST00000544474 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms